RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-223ENST00000618944 DNAJB14Q8TBM8 379 aa11.13□□□□□ -0.63
TP53-223ENST00000618944 C1orf50Q9BV19 199 aa11.13□□□□□ -0.63
TP53-223ENST00000618944 TDRD1Q9BXT4 1180 aaKnown RBP11.13□□□□□ -0.63
TP53-223ENST00000618944 DERL2Q9GZP9 239 aa11.13□□□□□ -0.63
TP53-223ENST00000618944 RNF38Q9H0F5 515 aa11.13□□□□□ -0.63
TP53-223ENST00000618944 POPDC3Q9HBV1 291 aa11.13□□□□□ -0.63
TP53-223ENST00000618944 CMTM6Q9NX76 183 aa11.13□□□□□ -0.63
TP53-223ENST00000618944 SMPD4Q9NXE4 827 aa11.13□□□□□ -0.63
TP53-223ENST00000618944 ZNF840PA6NDX5 716 aa11.13□□□□□ -0.63
TP53-223ENST00000618944 TNFAIP8O95379 198 aa11.13□□□□□ -0.63
TP53-223ENST00000618944 HOXB8P17481 243 aaPredicted RBP11.13□□□□□ -0.63
TP53-223ENST00000618944 PSMC3P17980 439 aa11.13□□□□□ -0.63
TP53-223ENST00000618944 LPOP22079 712 aaPredicted RBP11.13□□□□□ -0.63
TP53-223ENST00000618944 HK3P52790 923 aa11.13□□□□□ -0.63
TP53-223ENST00000618944 BTG3Q14201 252 aaPredicted RBP11.13□□□□□ -0.63
TP53-223ENST00000618944 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.13□□□□□ -0.63
TP53-223ENST00000618944 NADK2Q4G0N4 442 aa11.13□□□□□ -0.63
TP53-223ENST00000618944 EGFL6Q8IUX8 553 aa11.13□□□□□ -0.63
TP53-223ENST00000618944 CPNE9Q8IYJ1 553 aa11.13□□□□□ -0.63
TP53-223ENST00000618944 OR2T34Q8NGX1 318 aa11.13□□□□□ -0.63
TP53-223ENST00000618944 OR2T3Q8NH03 318 aa11.13□□□□□ -0.63
TP53-223ENST00000618944 TOP1MTQ969P6 601 aa11.13□□□□□ -0.63
TP53-223ENST00000618944 ROPN1LQ96C74 230 aa11.13□□□□□ -0.63
TP53-223ENST00000618944 GPATCH1Q9BRR8 931 aaKnown RBP11.13□□□□□ -0.63
TP53-223ENST00000618944 PIF1Q9H611 641 aa11.13□□□□□ -0.63
TP53-223ENST00000618944 ZNF225Q9UK10 706 aa11.13□□□□□ -0.63
TP53-223ENST00000618944 RNF11Q9Y3C5 154 aa11.13□□□□□ -0.63
TP53-223ENST00000618944 SAC3D1A6NKF1 404 aa11.12□□□□□ -0.63
TP53-223ENST00000618944 ANKRD66B4E2M5 251 aa11.12□□□□□ -0.63
TP53-223ENST00000618944 H7C4K7 107 aa11.12□□□□□ -0.63
TP53-223ENST00000618944 BAIAP3O94812 1187 aa11.12□□□□□ -0.63
TP53-223ENST00000618944 PKMP14618 531 aaKnown RBP11.12□□□□□ -0.63
TP53-223ENST00000618944 SELPP16109 830 aa11.12□□□□□ -0.63
TP53-223ENST00000618944 CR2P20023 1033 aa11.12□□□□□ -0.63
TP53-223ENST00000618944 RPL5P46777 297 aaKnown RBP11.12□□□□□ -0.63
TP53-223ENST00000618944 UFM1P61960 85 aa11.12□□□□□ -0.63
TP53-223ENST00000618944 SP3Q02447 781 aa11.12□□□□□ -0.63
TP53-223ENST00000618944 TWF1Q12792 350 aa11.12□□□□□ -0.63
TP53-223ENST00000618944 C18orf21Q32NC0 220 aaPredicted RBP11.12□□□□□ -0.63
TP53-223ENST00000618944 HECTD3Q5T447 861 aa11.12□□□□□ -0.63
TP53-223ENST00000618944 ALG1LQ6GMV1 187 aa11.12□□□□□ -0.63
TP53-223ENST00000618944 HACD2Q6Y1H2 254 aa11.12□□□□□ -0.63
TP53-223ENST00000618944 ZBTB49Q6ZSB9 765 aa11.12□□□□□ -0.63
TP53-223ENST00000618944 ANKS3Q6ZW76 656 aa11.12□□□□□ -0.63
TP53-223ENST00000618944 MFN1Q8IWA4 741 aa11.12□□□□□ -0.63
TP53-223ENST00000618944 GRIN3AQ8TCU5 1115 aa11.12□□□□□ -0.63
TP53-223ENST00000618944 LRRC58Q96CX6 371 aa11.12□□□□□ -0.63
TP53-223ENST00000618944 LINGO1Q96FE5 620 aa11.12□□□□□ -0.63
TP53-223ENST00000618944 TMEM79Q9BSE2 394 aa11.12□□□□□ -0.63
TP53-223ENST00000618944 SDR39U1Q9NRG7 319 aaPredicted RBP11.12□□□□□ -0.63
TP53-223ENST00000618944 CD274Q9NZQ7 290 aa11.12□□□□□ -0.63
TP53-223ENST00000618944 PDLIM1O00151 329 aa11.11□□□□□ -0.63
TP53-223ENST00000618944 PLOD2O00469 737 aa11.11□□□□□ -0.63
TP53-223ENST00000618944 SOCS2O14508 198 aa11.11□□□□□ -0.63
TP53-223ENST00000618944 STX7O15400 261 aaKnown RBP11.11□□□□□ -0.63
TP53-223ENST00000618944 SNX2O60749 519 aa11.11□□□□□ -0.63
TP53-223ENST00000618944 VPS26AO75436 327 aa11.11□□□□□ -0.63
TP53-223ENST00000618944 CLDN11O75508 207 aa11.11□□□□□ -0.63
TP53-223ENST00000618944 STC2O76061 302 aa11.11□□□□□ -0.63
TP53-223ENST00000618944 SEC24AO95486 1093 aa11.11□□□□□ -0.63
TP53-223ENST00000618944 PRAMEF12O95522 483 aa11.11□□□□□ -0.63
TP53-223ENST00000618944 F11P03951 625 aa11.11□□□□□ -0.63
TP53-223ENST00000618944 BMP1P13497 986 aa11.11□□□□□ -0.63
TP53-223ENST00000618944 CTPS1P17812 591 aa11.11□□□□□ -0.63
TP53-223ENST00000618944 HSPA13P48723 471 aa11.11□□□□□ -0.63
TP53-223ENST00000618944 ATP6V0D1P61421 351 aa11.11□□□□□ -0.63
TP53-223ENST00000618944 PRKCQQ04759 706 aa11.11□□□□□ -0.63
TP53-223ENST00000618944 TRAF2Q12933 501 aa11.11□□□□□ -0.63
TP53-223ENST00000618944 C5orf22Q49AR2 442 aa11.11□□□□□ -0.63
TP53-223ENST00000618944 RABL3Q5HYI8 236 aa11.11□□□□□ -0.63
TP53-223ENST00000618944 CTSL3PQ5NE16 218 aa11.11□□□□□ -0.63
TP53-223ENST00000618944 ACBD5Q5T8D3 534 aaPredicted RBP11.11□□□□□ -0.63
TP53-223ENST00000618944 AHI1Q8N157 1196 aa11.11□□□□□ -0.63
TP53-223ENST00000618944 CDYL2Q8N8U2 506 aa11.11□□□□□ -0.63
TP53-223ENST00000618944 OR2T11Q8NH01 316 aa11.11□□□□□ -0.63
TP53-223ENST00000618944 NUDT8Q8WV74 236 aa11.11□□□□□ -0.63
TP53-223ENST00000618944 ZFAND2BQ8WV99 257 aa11.11□□□□□ -0.63
TP53-223ENST00000618944 DGCR14Q96DF8 476 aaKnown RBP11.11□□□□□ -0.63
TP53-223ENST00000618944 HBEGFQ99075 208 aa11.11□□□□□ -0.63
TP53-223ENST00000618944 HOPXQ9BPY8 73 aaPredicted RBP11.11□□□□□ -0.63
TP53-223ENST00000618944 EFHD1Q9BUP0 239 aa11.11□□□□□ -0.63
TP53-223ENST00000618944 SLAMF8Q9P0V8 285 aa11.11□□□□□ -0.63
TP53-223ENST00000618944 EIF2B4Q9UI10 523 aaKnown RBP11.11□□□□□ -0.63
TP53-223ENST00000618944 TRMT6Q9UJA5 497 aaKnown RBP11.11□□□□□ -0.63
TP53-223ENST00000618944 GPR45Q9Y5Y3 372 aa11.11□□□□□ -0.63
TP53-223ENST00000618944 OAS3Q9Y6K5 1087 aaKnown RBP11.11□□□□□ -0.63
TP53-223ENST00000618944 VWA8A3KMH1 1905 aa11.11□□□□□ -0.63
TP53-223ENST00000618944 C2orf78A6NCI8 922 aa11.11□□□□□ -0.63
TP53-223ENST00000618944 SYCE1LA8MT33 242 aa11.11□□□□□ -0.63
TP53-223ENST00000618944 BBIP1A8MTZ0 92 aa11.11□□□□□ -0.63
TP53-223ENST00000618944 E5RI56 91 aa11.11□□□□□ -0.63
TP53-223ENST00000618944 VILLO15195 856 aa11.11□□□□□ -0.63
TP53-223ENST00000618944 TSPAN12O95859 305 aa11.11□□□□□ -0.63
TP53-223ENST00000618944 MYCP01106 439 aaPredicted RBP11.11□□□□□ -0.63
TP53-223ENST00000618944 CYBBP04839 570 aa11.11□□□□□ -0.63
TP53-223ENST00000618944 PYGLP06737 847 aa11.11□□□□□ -0.63
TP53-223ENST00000618944 MTHFD1P11586 935 aaKnown RBP11.11□□□□□ -0.63
TP53-223ENST00000618944 NCK1P16333 377 aa11.11□□□□□ -0.63
TP53-223ENST00000618944 ITGB6P18564 788 aa11.11□□□□□ -0.63
TP53-223ENST00000618944 SLC6A2P23975 617 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms