RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 NR0B2Q15466 257 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 KHDC1Q4VXA5 237 aaKnown RBP8.17□□□□□ -1.1
NEK3-209ENST00000618856 RD3Q7Z3Z2 195 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 ZNF438Q7Z4V0 828 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 C11orf96Q7Z7L8 435 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 PRUNE1Q86TP1 453 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 LINC00523Q86TU6 105 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 TRIM74Q86UV6 250 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 ZNF547Q8IVP9 402 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 DCBLD1Q8N8Z6 715 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 DDHD1Q8NEL9 900 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 OR6C4Q8NGE1 309 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 SCG3Q8WXD2 468 aaKnown RBP8.17□□□□□ -1.1
NEK3-209ENST00000618856 GATA6Q92908 595 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 MS4A14Q96JA4 679 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 OR2M4Q96R27 311 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 RANBP9Q96S59 729 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 APOL2Q9BQE5 337 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 SPATA16Q9BXB7 569 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 BPIFA1Q9NP55 256 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 CASS4Q9NQ75 786 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 SPATS2LQ9NUQ6 558 aaKnown RBP8.17□□□□□ -1.1
NEK3-209ENST00000618856 TRMT1Q9NXH9 659 aaKnown RBP8.17□□□□□ -1.1
NEK3-209ENST00000618856 GOLGA6AQ9NYA3 693 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 ATXN10Q9UBB4 475 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 APPL1Q9UKG1 709 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 KLK13Q9UKR3 277 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 RIMKLBQ9ULI2 386 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 ARL5AQ9Y689 179 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 KMT2BQ9UMN6 2715 aaPredicted RBP8.17□□□□□ -1.1
NEK3-209ENST00000618856 IGLV3-16A0A075B6K0 115 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 TRBV5-4A0A0C4DH59 114 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 PGRMC1O00264 195 aaKnown RBP8.16□□□□□ -1.1
NEK3-209ENST00000618856 NTN3O00634 580 aaPredicted RBP8.16□□□□□ -1.1
NEK3-209ENST00000618856 INPP4BO15327 924 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 STX7O15400 261 aaKnown RBP8.16□□□□□ -1.1
NEK3-209ENST00000618856 SGTAO43765 313 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 OPA1O60313 960 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 SLC25A14O95258 325 aaPredicted RBP8.16□□□□□ -1.1
NEK3-209ENST00000618856 MYF5P13349 255 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 TCP1P17987 556 aaKnown RBP8.16□□□□□ -1.1
NEK3-209ENST00000618856 GRIA1P42261 906 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 TNNT3P45378 269 aaPredicted RBP8.16□□□□□ -1.1
NEK3-209ENST00000618856 GNPDA1P46926 289 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 KCNJ1P48048 391 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 RPIAP49247 311 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 CDH17Q12864 832 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 ILF3Q12906 894 aaKnown RBP eCLIP8.16□□□□□ -1.1
NEK3-209ENST00000618856 ITGA9Q13797 1035 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 CHRNA6Q15825 494 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 C14orf28Q4W4Y0 310 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 HS1BP3Q53T59 392 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 PERM1Q5SV97 790 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 CERCAMQ5T4B2 595 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 ARMC3Q5W041 872 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 ALS2CLQ60I27 953 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 GUSBP11Q6P575 273 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 DHRS13Q6UX07 377 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 XKR5Q6UX68 686 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 ZNF534Q76KX8 674 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 GALNT13Q8IUC8 556 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 CREG2Q8IUH2 290 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 PHYKPLQ8IUZ5 450 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 SFTPA2Q8IWL1 248 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 NAGSQ8N159 534 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 GALNT15Q8N3T1 639 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 KYQ8NBH2 561 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 OR4K2Q8NGD2 314 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 IFI44Q8TCB0 444 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 SLCO2A1Q92959 643 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 PEX13Q92968 403 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 GLMNQ92990 594 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 NAT6Q93015 286 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 LRRC45Q96CN5 670 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 SGSM3Q96HU1 749 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 NAP1L3Q99457 506 aaPredicted RBP8.16□□□□□ -1.1
NEK3-209ENST00000618856 GSDMCQ9BYG8 508 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 EPG5Q9HCE0 2579 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 RAB6BQ9NRW1 208 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 EVA1BQ9NVM1 165 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 NLE1Q9NVX2 485 aaPredicted RBP8.16□□□□□ -1.1
NEK3-209ENST00000618856 TAAR2Q9P1P5 351 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 PADI4Q9UM07 663 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 GPR34Q9UPC5 381 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 USP24Q9UPU5 2620 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 PKP3Q9Y446 797 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 PLEKHM1Q9Y4G2 1056 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 KCTD3Q9Y597 815 aa8.16□□□□□ -1.1
NEK3-209ENST00000618856 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.16□□□□□ -1.1
NEK3-209ENST00000618856 ZNF185O15231 689 aa8.15□□□□□ -1.1
NEK3-209ENST00000618856 GPR39O43194 453 aa8.15□□□□□ -1.1
NEK3-209ENST00000618856 GRID2O43424 1007 aa8.15□□□□□ -1.1
NEK3-209ENST00000618856 BUD23O43709 281 aaKnown RBP8.15□□□□□ -1.1
NEK3-209ENST00000618856 NUDT21O43809 227 aaKnown RBP8.15□□□□□ -1.1
NEK3-209ENST00000618856 UGT1A9O60656 530 aa8.15□□□□□ -1.1
NEK3-209ENST00000618856 KCNJ13O60928 360 aa8.15□□□□□ -1.1
NEK3-209ENST00000618856 PHF2O75151 1096 aa8.15□□□□□ -1.1
NEK3-209ENST00000618856 TCEA3O75764 348 aa8.15□□□□□ -1.1
NEK3-209ENST00000618856 SRP72O76094 671 aaKnown RBP8.15□□□□□ -1.1
NEK3-209ENST00000618856 PRAMEF1O95521 474 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms