RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 ARMC5Q96C12 935 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 SAE1Q9UBE0 346 aaPredicted RBP14.95□□□□□ -0.02
COL5A1-208ENST00000618395 NOP16Q9Y3C1 178 aaKnown RBP14.95□□□□□ -0.02
COL5A1-208ENST00000618395 A0A087X0B3 334 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 PRKCAP17252 672 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 ASTE1Q2TB18 679 aaPredicted RBP14.95□□□□□ -0.02
COL5A1-208ENST00000618395 USP49Q70CQ1 688 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 USP45Q70EL2 814 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 SPATA19Q7Z5L4 167 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 OR7G1Q8NGA0 311 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 C9orf43Q8TAL5 461 aaPredicted RBP14.95□□□□□ -0.02
COL5A1-208ENST00000618395 C8orf48Q96LL4 319 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 HEPHQ9BQS7 1158 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 HTATIP2Q9BUP3 242 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 COMMD4Q9H0A8 199 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 IL4RP24394 825 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 RP1P56715 2156 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 AGMOQ6ZNB7 445 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 TICAM1Q8IUC6 712 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 PIAS4Q8N2W9 510 aaPredicted RBP14.95□□□□□ -0.02
COL5A1-208ENST00000618395 WACQ9BTA9 647 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 RCOR3Q9P2K3 495 aaPredicted RBP14.95□□□□□ -0.02
COL5A1-208ENST00000618395 PHF24Q9UPV7 400 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 PEX11AO75192 247 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 JCHAINP01591 159 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 DPYSL3Q14195 570 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 ACSBG2Q5FVE4 666 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 TRABD2AQ86V40 505 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 PDSS2Q86YH6 399 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 STK40Q8N2I9 435 aa14.95□□□□□ -0.02
COL5A1-208ENST00000618395 TBX3O15119 743 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 KRT33AO76009 404 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 ZNF7P17097 686 aaPredicted RBP14.94□□□□□ -0.02
COL5A1-208ENST00000618395 PPP3R1P63098 170 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 APTXQ7Z2E3 356 aaKnown RBP14.94□□□□□ -0.02
COL5A1-208ENST00000618395 TLR8Q9NR97 1041 aaKnown RBP14.94□□□□□ -0.02
COL5A1-208ENST00000618395 ABCC10Q5T3U5 1492 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 TIGD2Q4W5G0 525 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 MARVELD2Q8N4S9 558 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 ZNF248Q8NDW4 579 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 SNX33Q8WV41 574 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 SPATA9Q9BWV2 254 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 ZNF341Q9BYN7 854 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 COQ3Q9NZJ6 369 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 LOC102724428A0A0B4J2F2 783 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 PAPSS2O95340 614 aaPredicted RBP14.94□□□□□ -0.02
COL5A1-208ENST00000618395 SIK1P57059 783 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 GALEQ14376 348 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 PON3Q15166 354 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 PCSK9Q8NBP7 692 aaKnown RBP14.94□□□□□ -0.02
COL5A1-208ENST00000618395 ZNF512Q96ME7 567 aaPredicted RBP14.94□□□□□ -0.02
COL5A1-208ENST00000618395 HCN2Q9UL51 889 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 KIAA1257Q9ULG3 409 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 TCOF1Q13428 1488 aaKnown RBP14.94□□□□□ -0.02
COL5A1-208ENST00000618395 RAB19A4D1S5 217 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 TXNL1O43396 289 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 GIMD1P0DJR0 217 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 CDC42EP1Q00587 391 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 ZNF697Q5TEC3 545 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 XKR5Q6UX68 686 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 CORO1BQ9BR76 489 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 ZNF416Q9BWM5 594 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 PLLPQ9Y342 182 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 ELOVL7A1L3X0 281 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 HK1P19367 917 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 MVKQ03426 396 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 GPRIN3Q6ZVF9 776 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 SCRN2Q96FV2 425 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 HYLS1Q96M11 299 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 VPS25Q9BRG1 176 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.94□□□□□ -0.02
COL5A1-208ENST00000618395 POMPQ9Y244 141 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 TBX10O75333 385 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 ZNF135P52742 658 aaPredicted RBP14.94□□□□□ -0.02
COL5A1-208ENST00000618395 SKP1P63208 163 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 ATF7IP2Q5U623 682 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 RFWD3Q6PCD5 774 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 TSPAN33Q86UF1 283 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 SLC41A1Q8IVJ1 513 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 CERS2Q96G23 380 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 C16orf58Q96GQ5 468 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 OR2M4Q96R27 311 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 CADM1Q9BY67 442 aaKnown RBP14.94□□□□□ -0.02
COL5A1-208ENST00000618395 POLR2J2Q9GZM3 115 aaKnown RBP14.94□□□□□ -0.02
COL5A1-208ENST00000618395 SLC38A7Q9NVC3 462 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 SLC9A3R1O14745 358 aaPredicted RBP14.94□□□□□ -0.02
COL5A1-208ENST00000618395 S100A10P60903 97 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 IQCKQ8N0W5 287 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 IFT27Q9BW83 186 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 ASF1AQ9Y294 204 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 ST14Q9Y5Y6 855 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 PTPRKQ15262 1439 aa14.94□□□□□ -0.02
COL5A1-208ENST00000618395 USP17L10C9JJH3 530 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 GLRA2P23416 452 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 KLF10Q13118 480 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 TRIM28Q13263 835 aaKnown RBP14.93□□□□□ -0.02
COL5A1-208ENST00000618395 TTLL4Q14679 1199 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 CPSF7Q8N684 471 aaKnown RBP14.93□□□□□ -0.02
COL5A1-208ENST00000618395 NKD1Q969G9 470 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 ROPN1LQ96C74 230 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms