RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 GOLGA8CPA6NN73 597 aa17.21■□□□□ 0.35
PCDHGC3-205ENST00000617641 BTN3A1O00481 513 aa17.21■□□□□ 0.35
PCDHGC3-205ENST00000617641 SDHDO14521 159 aa17.21■□□□□ 0.35
PCDHGC3-205ENST00000617641 PRMT5O14744 637 aaPredicted RBP17.21■□□□□ 0.35
PCDHGC3-205ENST00000617641 ECI2O75521 394 aa17.21■□□□□ 0.35
PCDHGC3-205ENST00000617641 POP4O95707 220 aaKnown RBP17.21■□□□□ 0.35
PCDHGC3-205ENST00000617641 CD1EP15812 388 aa17.21■□□□□ 0.35
PCDHGC3-205ENST00000617641 COPAP53621 1224 aa17.21■□□□□ 0.35
PCDHGC3-205ENST00000617641 BTKQ06187 659 aa17.21■□□□□ 0.35
PCDHGC3-205ENST00000617641 NAA25Q14CX7 972 aa17.21■□□□□ 0.35
PCDHGC3-205ENST00000617641 CHRNA6Q15825 494 aa17.21■□□□□ 0.35
PCDHGC3-205ENST00000617641 EML3Q32P44 896 aa17.21■□□□□ 0.35
PCDHGC3-205ENST00000617641 LRRC73Q5JTD7 316 aa17.21■□□□□ 0.35
PCDHGC3-205ENST00000617641 CERS6Q6ZMG9 384 aa17.21■□□□□ 0.35
PCDHGC3-205ENST00000617641 SNX20Q7Z614 316 aa17.21■□□□□ 0.35
PCDHGC3-205ENST00000617641 CYB5D2Q8WUJ1 264 aa17.21■□□□□ 0.35
PCDHGC3-205ENST00000617641 SMG7Q92540 1137 aaKnown RBP17.21■□□□□ 0.35
PCDHGC3-205ENST00000617641 MARK4Q96L34 752 aa17.21■□□□□ 0.35
PCDHGC3-205ENST00000617641 CCDC28BQ9BUN5 200 aa17.21■□□□□ 0.35
PCDHGC3-205ENST00000617641 COMMD10Q9Y6G5 202 aa17.21■□□□□ 0.35
PCDHGC3-205ENST00000617641 ZNF106Q9H2Y7 1883 aaKnown RBP17.21■□□□□ 0.34
PCDHGC3-205ENST00000617641 GLYATL1P3A0A0U1RQE8 302 aa17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 LOC100653049A0A140TA62 436 aa17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 TRPC5OSA6NMA1 111 aa17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 KRT34O76011 436 aa17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 WFS1O76024 890 aa17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 ITGALP20701 1170 aa17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 CD9P21926 228 aa17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 CPOXP36551 454 aa17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 GALNT1Q10472 559 aaPredicted RBP17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 GEN1Q17RS7 908 aa17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 FBXO48Q5FWF7 155 aa17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 LRRC66Q68CR7 880 aa17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 TMC5Q6UXY8 1006 aa17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 RAB44Q7Z6P3 723 aaPredicted RBP17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 FUBP1Q96AE4 644 aaKnown RBP17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 NSUN5Q96P11 429 aaKnown RBP17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 CATSPER2Q96P56 530 aa17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 LYSMD1Q96S90 227 aa17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 TRMOQ9BU70 441 aa17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 CPEB1Q9BZB8 566 aaKnown RBP17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 APPL1Q9UKG1 709 aa17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 CCDC189A1A4V9 331 aa17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 ARSAP15289 507 aa17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 TCF3P15923 654 aa17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 SPAM1P38567 509 aa17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 CLCN7P51798 805 aa17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 IL2P60568 153 aa17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 DMC1Q14565 340 aa17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 CLEC6AQ6EIG7 209 aa17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 TPRG1Q6ZUI0 275 aa17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 USP45Q70EL2 814 aa17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 ZNF557Q8N988 423 aaPredicted RBP17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 GPR26Q8NDV2 337 aa17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 OR2A12Q8NGT7 310 aa17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 STON2Q8WXE9 905 aa17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 OTUB2Q96DC9 234 aa17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 RSPRY1Q96DX4 576 aa17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 CMTM5Q96DZ9 223 aa17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 SCRN2Q96FV2 425 aa17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 CLPBQ9H078 707 aa17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 MARK1Q9P0L2 795 aa17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 ERVW-1Q9UQF0 538 aa17.2■□□□□ 0.34
PCDHGC3-205ENST00000617641 NCF1BA6NI72 391 aaPredicted RBP17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 NCF1CA8MVU1 366 aaPredicted RBP17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 PPP6CO00743 305 aa17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 ENTPD5O75356 428 aa17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 COX4I1P13073 169 aa17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 NCF1P14598 390 aaPredicted RBP17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 POLR2EP19388 210 aaKnown RBP17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 LHCGRP22888 699 aa17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 SLC25A3Q00325 362 aa17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 DNAL1Q4LDG9 190 aa17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 TCEAL5Q5H9L2 206 aa17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 WASHC2DQ5SRD0 308 aa17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 TRIM68Q6AZZ1 485 aa17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 PTRHD1Q6GMV3 140 aaKnown RBP17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 KIAA0907Q7Z7F0 614 aaPredicted RBP17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 FBXO39Q8N4B4 442 aa17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 CLDN19Q8N6F1 224 aa17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 MAELQ96JY0 434 aaKnown RBP17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 FAR2Q96K12 515 aa17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 CLPTM1LQ96KA5 538 aa17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 C1orf21Q9H246 121 aa17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 MMADHCQ9H3L0 296 aaPredicted RBP17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 ZNF385DQ9H6B1 395 aa17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 TSR3Q9UJK0 312 aaKnown RBP17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 L3MBTL1Q9Y468 752 aa17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 TRAF6Q9Y4K3 522 aa17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 PCDHB1Q9Y5F3 818 aa17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 PRSS21Q9Y6M0 314 aa17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 TRBV5-4A0A0C4DH59 114 aa17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 CHUKO15111 745 aa17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 ZNF7P17097 686 aaPredicted RBP17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 ITGB6P18564 788 aa17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 ACRV1P26436 265 aa17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 EEF1DP29692 281 aaKnown RBP17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 MNAT1P51948 309 aa17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 DHCR24Q15392 516 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms