RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 CD48P09326 243 aa10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 CCNYL3P0C7X3 344 aa10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 CSH1P0DML2 217 aa10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 CSH2P0DML3 217 aa10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 UROSP10746 265 aa10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 NCK1P16333 377 aa10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 MC4RP32245 332 aa10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 PHC1P78364 1004 aa10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 GNA12Q03113 381 aa10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 KCNA10Q16322 511 aa10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 ZNF829Q3KNS6 432 aaPredicted RBP10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 OLFML2AQ68BL7 652 aa10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 SULT1C3Q6IMI6 304 aa10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 USP43Q70EL4 1123 aa10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 LAPTM4BQ86VI4 370 aa10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 ZNF655Q8N720 491 aaPredicted RBP10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 ENDOVQ8N8Q3 282 aaKnown RBP10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 SMG8Q8ND04 991 aaKnown RBP10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 OR4A15Q8NGL6 344 aa10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 APOLD1Q96LR9 279 aa10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 DMRTB1Q96MA1 342 aa10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 PCDHAC1Q9H158 963 aa10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 SIX2Q9NPC8 291 aa10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 RNF19AQ9NV58 838 aa10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 FAM47E-STBD1D6RA91 191 aa10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 KLF11O14901 512 aa10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 PCDH8O95206 1070 aa10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 TRBC1P01850 177 aa10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 HLA-DQA2P01906 255 aa10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 XRCC1P18887 633 aaPredicted RBP10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 BUD31P41223 144 aaPredicted RBP10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 INTS6LQ5JSJ4 861 aaKnown RBP10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 RBM48Q5RL73 367 aaKnown RBP10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 TRMT10BQ6PF06 316 aaKnown RBP10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 MRPL45Q9BRJ2 306 aaKnown RBP10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 COPS4Q9BT78 406 aa10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 GBA3Q9H227 469 aa10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 MTIF3Q9H2K0 278 aaKnown RBP10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 INTS10Q9NVR2 710 aaKnown RBP10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 SPATA31A5Q5VU36 1347 aa10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 SPATA31A7Q8IWB4 1347 aa10.6□□□□□ -0.71
CLTCL1-209ENST00000617103 NPEPPSL1A6NEC2 478 aa10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 UGT2B17O75795 530 aa10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 RPP40O75818 363 aaKnown RBP10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 SNX4O95219 450 aa10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 DPEP1P16444 411 aa10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 PCSK2P16519 638 aa10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 ACADVLP49748 655 aa10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 E2F2Q14209 437 aa10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 FKBP1CQ5VVH2 108 aa10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 ERLEC1Q96DZ1 483 aa10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 ABHD16BQ9H3Z7 469 aa10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 INTS7Q9NVH2 962 aaKnown RBP10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 TBCCD1Q9NVR7 557 aa10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 DHRS7Q9Y394 339 aa10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 HES2Q9Y543 173 aa10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 OAS3Q9Y6K5 1087 aaKnown RBP10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 DIP2BQ9P265 1576 aa10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 TSPAN4O14817 238 aa10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 CILPO75339 1184 aa10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 TMEM63AO94886 807 aa10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 C8BP07358 591 aa10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 TLX1P31314 330 aaPredicted RBP10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 CCR4P51679 360 aa10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 DAG1Q14118 895 aa10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 MFSD10Q14728 455 aa10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 PCBP1Q15365 356 aaKnown RBP eCLIP10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 RUNDC3AQ59EK9 446 aa10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 PITRM1Q5JRX3 1037 aa10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 DCLRE1AQ6PJP8 1040 aa10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 PDSS2Q86YH6 399 aa10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 DRAXINQ8NBI3 349 aaPredicted RBP10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 RNASE11Q8TAA1 199 aaKnown RBP10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 HEXDCQ8WVB3 486 aa10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 COL26A1Q96A83 441 aa10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 GFM1Q96RP9 751 aaKnown RBP10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 KCTD15Q96SI1 283 aaPredicted RBP10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 COPS8Q99627 209 aa10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 SLC39A8Q9C0K1 460 aa10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 MTRRQ9UBK8 725 aa10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 CNOT6Q9ULM6 557 aaKnown RBP10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 NUDT14O95848 222 aa10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 COL6A1P12109 1028 aa10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 ATF4P18848 351 aaPredicted RBP10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 AOC1P19801 751 aa10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 RPL4P36578 427 aaKnown RBP10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 ZNF157P51786 506 aaPredicted RBP10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 SLC9B1Q4ZJI4 515 aa10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 RFTN2Q52LD8 501 aaPredicted RBP10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 CELF3Q5SZQ8 465 aaKnown RBP10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 OTOP3Q7RTS5 596 aa10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 RASAL3Q86YV0 1011 aa10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 IPCEF1Q8WWN9 437 aaPredicted RBP10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 CLP1Q92989 425 aaKnown RBP10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 ATP13A3Q9H7F0 1226 aa10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 DMAC2Q9NW81 257 aa10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 PTBP2Q9UKA9 531 aaKnown RBP10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 STX16-NPEPL1H3BU86 382 aa10.59□□□□□ -0.71
CLTCL1-209ENST00000617103 WWP2O00308 870 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms