RNA–Protein interactions for RNA: ENST00000616010.4

CCND3-223, Transcript of cyclin D3, humanhuman

TSL 5 BASIC

Gene CCND3, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-223ENST00000616010 DGKEP52429 567 aa23.26■■□□□ 1.31
CCND3-223ENST00000616010 RAB10P61026 200 aa23.26■■□□□ 1.31
CCND3-223ENST00000616010 ILF2Q12905 390 aaKnown RBP23.26■■□□□ 1.31
CCND3-223ENST00000616010 LYPLAL1Q5VWZ2 237 aa23.26■■□□□ 1.31
CCND3-223ENST00000616010 FAM124AQ86V42 546 aa23.26■■□□□ 1.31
CCND3-223ENST00000616010 RBFAQ8N0V3 343 aa23.26■■□□□ 1.31
CCND3-223ENST00000616010 ULK4Q96C45 1275 aa23.26■■□□□ 1.31
CCND3-223ENST00000616010 BIRC8Q96P09 236 aa23.26■■□□□ 1.31
CCND3-223ENST00000616010 NELL2Q99435 816 aa23.26■■□□□ 1.31
CCND3-223ENST00000616010 AARSD1Q9BTE6 412 aaKnown RBP23.26■■□□□ 1.31
CCND3-223ENST00000616010 CNOT10Q9H9A5 744 aaKnown RBP23.26■■□□□ 1.31
CCND3-223ENST00000616010 FZD4Q9ULV1 537 aa23.26■■□□□ 1.31
CCND3-223ENST00000616010 TRPM6Q9BX84 2022 aa23.25■■□□□ 1.31
CCND3-223ENST00000616010 STK25O00506 426 aa23.25■■□□□ 1.31
CCND3-223ENST00000616010 RPA3P35244 121 aaPredicted RBP23.25■■□□□ 1.31
CCND3-223ENST00000616010 CDKN2DP55273 166 aa23.25■■□□□ 1.31
CCND3-223ENST00000616010 ZKSCAN8Q15776 578 aaPredicted RBP23.25■■□□□ 1.31
CCND3-223ENST00000616010 SEL1L3Q68CR1 1132 aa23.25■■□□□ 1.31
CCND3-223ENST00000616010 USP30Q70CQ3 517 aa23.25■■□□□ 1.31
CCND3-223ENST00000616010 KBTBD6Q86V97 674 aa23.25■■□□□ 1.31
CCND3-223ENST00000616010 MGARPQ8TDB4 240 aa23.25■■□□□ 1.31
CCND3-223ENST00000616010 SMOXQ9NWM0 555 aa23.25■■□□□ 1.31
CCND3-223ENST00000616010 TMPRSS11EQ9UL52 423 aa23.25■■□□□ 1.31
CCND3-223ENST00000616010 NCKAP1Q9Y2A7 1128 aa23.25■■□□□ 1.31
CCND3-223ENST00000616010 VWA7Q9Y334 891 aa23.25■■□□□ 1.31
CCND3-223ENST00000616010 IGLON5A6NGN9 336 aa23.25■■□□□ 1.31
CCND3-223ENST00000616010 TM7SF2O76062 418 aa23.25■■□□□ 1.31
CCND3-223ENST00000616010 C2P06681 752 aa23.25■■□□□ 1.31
CCND3-223ENST00000616010 CHN1P15882 459 aa23.25■■□□□ 1.31
CCND3-223ENST00000616010 ZNF7P17097 686 aaPredicted RBP23.25■■□□□ 1.31
CCND3-223ENST00000616010 CSRP3P50461 194 aa23.25■■□□□ 1.31
CCND3-223ENST00000616010 CREB5Q02930 508 aa23.25■■□□□ 1.31
CCND3-223ENST00000616010 SETMARQ53H47 684 aaPredicted RBP23.25■■□□□ 1.31
CCND3-223ENST00000616010 CTSL3PQ5NE16 218 aa23.25■■□□□ 1.31
CCND3-223ENST00000616010 DTX3LQ8TDB6 740 aa23.25■■□□□ 1.31
CCND3-223ENST00000616010 NAT14Q8WUY8 206 aa23.25■■□□□ 1.31
CCND3-223ENST00000616010 FAM136AQ96C01 138 aa23.25■■□□□ 1.31
CCND3-223ENST00000616010 MLXIPLQ9NP71 852 aa23.25■■□□□ 1.31
CCND3-223ENST00000616010 PRMT5O14744 637 aaPredicted RBP23.24■■□□□ 1.31
CCND3-223ENST00000616010 ATG13O75143 517 aa23.24■■□□□ 1.31
CCND3-223ENST00000616010 MPOP05164 745 aa23.24■■□□□ 1.31
CCND3-223ENST00000616010 SLC35E2BP0CK96 405 aa23.24■■□□□ 1.31
CCND3-223ENST00000616010 ADARP55265 1226 aaKnown RBP23.24■■□□□ 1.31
CCND3-223ENST00000616010 IRF9Q00978 393 aa23.24■■□□□ 1.31
CCND3-223ENST00000616010 TAF1BQ53T94 588 aaPredicted RBP23.24■■□□□ 1.31
CCND3-223ENST00000616010 GPRC6AQ5T6X5 926 aa23.24■■□□□ 1.31
CCND3-223ENST00000616010 CDHR3Q6ZTQ4 885 aa23.24■■□□□ 1.31
CCND3-223ENST00000616010 ZNF765Q7L2R6 523 aa23.24■■□□□ 1.31
CCND3-223ENST00000616010 PIM3Q86V86 326 aa23.24■■□□□ 1.31
CCND3-223ENST00000616010 PGBD3Q8N328 593 aa23.24■■□□□ 1.31
CCND3-223ENST00000616010 TCP10LQ8TDR4 215 aa23.24■■□□□ 1.31
CCND3-223ENST00000616010 TSPAN17Q96FV3 270 aa23.24■■□□□ 1.31
CCND3-223ENST00000616010 CABS1Q96KC9 395 aa23.24■■□□□ 1.31
CCND3-223ENST00000616010 COPS8Q99627 209 aa23.24■■□□□ 1.31
CCND3-223ENST00000616010 OSBPL6Q9BZF3 934 aa23.24■■□□□ 1.31
CCND3-223ENST00000616010 CLPBQ9H078 707 aa23.24■■□□□ 1.31
CCND3-223ENST00000616010 IQCGQ9H095 443 aaKnown RBP23.24■■□□□ 1.31
CCND3-223ENST00000616010 P2RY12Q9H244 342 aa23.24■■□□□ 1.31
CCND3-223ENST00000616010 MKS1Q9NXB0 559 aa23.24■■□□□ 1.31
CCND3-223ENST00000616010 ZDHHC3Q9NYG2 299 aa23.24■■□□□ 1.31
CCND3-223ENST00000616010 NKIRAS1Q9NYS0 192 aa23.24■■□□□ 1.31
CCND3-223ENST00000616010 FDXRP22570 491 aa23.23■■□□□ 1.31
CCND3-223ENST00000616010 TPMTP51580 245 aa23.23■■□□□ 1.31
CCND3-223ENST00000616010 SFSWAPQ12872 951 aaKnown RBP23.23■■□□□ 1.31
CCND3-223ENST00000616010 ANO7Q6IWH7 933 aa23.23■■□□□ 1.31
CCND3-223ENST00000616010 PELI3Q8N2H9 469 aa23.23■■□□□ 1.31
CCND3-223ENST00000616010 PJA1Q8NG27 643 aa23.23■■□□□ 1.31
CCND3-223ENST00000616010 GDAP1Q8TB36 358 aa23.23■■□□□ 1.31
CCND3-223ENST00000616010 C12orf65Q9H3J6 166 aaKnown RBP23.23■■□□□ 1.31
CCND3-223ENST00000616010 TLK1Q9UKI8 766 aa23.23■■□□□ 1.31
CCND3-223ENST00000616010 ZFR2Q9UPR6 939 aaKnown RBP23.23■■□□□ 1.31
CCND3-223ENST00000616010 K7ESM1 405 aa23.23■■□□□ 1.31
CCND3-223ENST00000616010 ESR1P03372 595 aa23.23■■□□□ 1.31
CCND3-223ENST00000616010 PKMP14618 531 aaKnown RBP23.23■■□□□ 1.31
CCND3-223ENST00000616010 CRABP2P29373 138 aa23.23■■□□□ 1.31
CCND3-223ENST00000616010 CCT5P48643 541 aa23.23■■□□□ 1.31
CCND3-223ENST00000616010 ITIH4Q14624 930 aa23.23■■□□□ 1.31
CCND3-223ENST00000616010 RAET1GQ6H3X3 334 aa23.23■■□□□ 1.31
CCND3-223ENST00000616010 HHIPQ96QV1 700 aa23.23■■□□□ 1.31
CCND3-223ENST00000616010 RHOBTB1O94844 696 aa23.22■■□□□ 1.31
CCND3-223ENST00000616010 SOD1P00441 154 aa23.22■■□□□ 1.31
CCND3-223ENST00000616010 AKT1P31749 480 aa23.22■■□□□ 1.31
CCND3-223ENST00000616010 LRRC14Q15048 493 aa23.22■■□□□ 1.31
CCND3-223ENST00000616010 SPNS2Q8IVW8 549 aa23.22■■□□□ 1.31
CCND3-223ENST00000616010 CLDN19Q8N6F1 224 aa23.22■■□□□ 1.31
CCND3-223ENST00000616010 TSTD1Q8NFU3 115 aa23.22■■□□□ 1.31
CCND3-223ENST00000616010 NECAB3Q96P71 396 aaPredicted RBP23.22■■□□□ 1.31
CCND3-223ENST00000616010 SLC17A7Q9P2U7 560 aa23.22■■□□□ 1.31
CCND3-223ENST00000616010 PCDHB1Q9Y5F3 818 aa23.22■■□□□ 1.31
CCND3-223ENST00000616010 PRSS21Q9Y6M0 314 aa23.22■■□□□ 1.31
CCND3-223ENST00000616010 DNAJC6O75061 913 aa23.21■■□□□ 1.31
CCND3-223ENST00000616010 GLRA3O75311 464 aa23.21■■□□□ 1.31
CCND3-223ENST00000616010 NIPSNAP2O75323 286 aa23.21■■□□□ 1.31
CCND3-223ENST00000616010 MTX2O75431 263 aa23.21■■□□□ 1.31
CCND3-223ENST00000616010 ZWINTO95229 277 aa23.21■■□□□ 1.31
CCND3-223ENST00000616010 RPS3P23396 243 aaKnown RBP eCLIP23.21■■□□□ 1.312e-7■■□□□ 11.7
CCND3-223ENST00000616010 CRHR1P34998 444 aa23.21■■□□□ 1.31
CCND3-223ENST00000616010 NSG1P42857 185 aa23.21■■□□□ 1.31
CCND3-223ENST00000616010 RPS21P63220 83 aaKnown RBP23.21■■□□□ 1.31
CCND3-223ENST00000616010 TIAL1Q01085 375 aaKnown RBP eCLIP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms