RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 CDH24Q86UP0 819 aa14.65□□□□□ -0.06
SNPH-203ENST00000614659 ANKLE1Q8NAG6 615 aa14.65□□□□□ -0.06
SNPH-203ENST00000614659 RERGQ96A58 199 aaPredicted RBP14.65□□□□□ -0.06
SNPH-203ENST00000614659 TBCDQ9BTW9 1192 aa14.65□□□□□ -0.06
SNPH-203ENST00000614659 OSBPL10Q9BXB5 764 aa14.65□□□□□ -0.06
SNPH-203ENST00000614659 CRNNQ9UBG3 495 aaPredicted RBP14.65□□□□□ -0.06
SNPH-203ENST00000614659 ANKDD1BA6NHY2 528 aa14.65□□□□□ -0.06
SNPH-203ENST00000614659 PRMT5O14744 637 aaPredicted RBP14.65□□□□□ -0.06
SNPH-203ENST00000614659 LRIG2O94898 1065 aa14.65□□□□□ -0.06
SNPH-203ENST00000614659 MAXP61244 160 aa14.65□□□□□ -0.06
SNPH-203ENST00000614659 SLC39A4Q6P5W5 647 aa14.65□□□□□ -0.06
SNPH-203ENST00000614659 CYP20A1Q6UW02 462 aa14.65□□□□□ -0.06
SNPH-203ENST00000614659 TAC4Q86UU9 113 aa14.65□□□□□ -0.06
SNPH-203ENST00000614659 ATAD1Q8NBU5 361 aa14.65□□□□□ -0.06
SNPH-203ENST00000614659 KBTBD8Q8NFY9 601 aa14.65□□□□□ -0.06
SNPH-203ENST00000614659 DNAJB8Q8NHS0 232 aa14.65□□□□□ -0.06
SNPH-203ENST00000614659 SLC47A1Q96FL8 570 aa14.65□□□□□ -0.06
SNPH-203ENST00000614659 BBS4Q96RK4 519 aa14.65□□□□□ -0.06
SNPH-203ENST00000614659 NPAS2Q99743 824 aa14.65□□□□□ -0.06
SNPH-203ENST00000614659 FAIM2Q9BWQ8 316 aa14.65□□□□□ -0.06
SNPH-203ENST00000614659 TDRD1Q9BXT4 1180 aaKnown RBP14.65□□□□□ -0.06
SNPH-203ENST00000614659 DPEP3Q9H4B8 488 aa14.65□□□□□ -0.06
SNPH-203ENST00000614659 CERS4Q9HA82 394 aa14.65□□□□□ -0.06
SNPH-203ENST00000614659 A8MUI8 341 aa14.64□□□□□ -0.07
SNPH-203ENST00000614659 TULP3O75386 442 aa14.64□□□□□ -0.07
SNPH-203ENST00000614659 ABCB1P08183 1280 aaPredicted RBP14.64□□□□□ -0.07
SNPH-203ENST00000614659 UROSP10746 265 aa14.64□□□□□ -0.07
SNPH-203ENST00000614659 TACR2P21452 398 aa14.64□□□□□ -0.07
SNPH-203ENST00000614659 WDR4P57081 412 aaKnown RBP14.64□□□□□ -0.07
SNPH-203ENST00000614659 REP15Q6BDI9 236 aa14.64□□□□□ -0.07
SNPH-203ENST00000614659 RBM44Q6ZP01 1051 aaKnown RBP14.64□□□□□ -0.07
SNPH-203ENST00000614659 PHYKPLQ8IUZ5 450 aa14.64□□□□□ -0.07
SNPH-203ENST00000614659 COLGALT2Q8IYK4 626 aa14.64□□□□□ -0.07
SNPH-203ENST00000614659 COPS8Q99627 209 aa14.64□□□□□ -0.07
SNPH-203ENST00000614659 RAD9AQ99638 391 aa14.64□□□□□ -0.07
SNPH-203ENST00000614659 HDHD2Q9H0R4 259 aa14.64□□□□□ -0.07
SNPH-203ENST00000614659 SERHL2Q9H4I8 314 aa14.64□□□□□ -0.07
SNPH-203ENST00000614659 SERHLQ9NQF3 203 aa14.64□□□□□ -0.07
SNPH-203ENST00000614659 RNF19AQ9NV58 838 aa14.64□□□□□ -0.07
SNPH-203ENST00000614659 CNTN3Q9P232 1028 aa14.64□□□□□ -0.07
SNPH-203ENST00000614659 ENTPD4Q9Y227 616 aa14.64□□□□□ -0.07
SNPH-203ENST00000614659 GMPPBQ9Y5P6 360 aa14.64□□□□□ -0.07
SNPH-203ENST00000614659 UGT2B11O75310 529 aa14.64□□□□□ -0.07
SNPH-203ENST00000614659 CST1P01037 141 aa14.64□□□□□ -0.07
SNPH-203ENST00000614659 SLC18A2Q05940 514 aa14.64□□□□□ -0.07
SNPH-203ENST00000614659 RGS1Q08116 209 aa14.64□□□□□ -0.07
SNPH-203ENST00000614659 TRAP1Q12931 704 aaKnown RBP14.64□□□□□ -0.07
SNPH-203ENST00000614659 RFTN1Q14699 578 aaPredicted RBP14.64□□□□□ -0.07
SNPH-203ENST00000614659 TAF5Q15542 800 aa14.64□□□□□ -0.07
SNPH-203ENST00000614659 ARL13AQ5H913 290 aaPredicted RBP14.64□□□□□ -0.07
SNPH-203ENST00000614659 SDHAF4Q5VUM1 108 aa14.64□□□□□ -0.07
SNPH-203ENST00000614659 SLC9A4Q6AI14 798 aa14.64□□□□□ -0.07
SNPH-203ENST00000614659 GDF6Q6KF10 455 aaPredicted RBP14.64□□□□□ -0.07
SNPH-203ENST00000614659 GK5Q6ZS86 529 aa14.64□□□□□ -0.07
SNPH-203ENST00000614659 CYP4X1Q8N118 509 aa14.64□□□□□ -0.07
SNPH-203ENST00000614659 TWIST2Q8WVJ9 160 aa14.64□□□□□ -0.07
SNPH-203ENST00000614659 DDX1Q92499 740 aaKnown RBP14.64□□□□□ -0.07
SNPH-203ENST00000614659 EFCAB10A6NFE3 127 aa14.64□□□□□ -0.07
SNPH-203ENST00000614659 GSTM1P09488 218 aa14.64□□□□□ -0.07
SNPH-203ENST00000614659 LRRN4Q8WUT4 740 aa14.64□□□□□ -0.07
SNPH-203ENST00000614659 ALS2Q96Q42 1657 aa14.64□□□□□ -0.07
SNPH-203ENST00000614659 OSBPL2Q9H1P3 480 aa14.64□□□□□ -0.07
SNPH-203ENST00000614659 KLHL31Q9H511 634 aa14.64□□□□□ -0.07
SNPH-203ENST00000614659 RERGLQ9H628 205 aa14.64□□□□□ -0.07
SNPH-203ENST00000614659 SP100P23497 879 aaPredicted RBP14.64□□□□□ -0.07
SNPH-203ENST00000614659 ALDH9A1P49189 494 aa14.64□□□□□ -0.07
SNPH-203ENST00000614659 VEGFBP49765 207 aa14.64□□□□□ -0.07
SNPH-203ENST00000614659 POLR2JP52435 117 aaKnown RBP14.64□□□□□ -0.07
SNPH-203ENST00000614659 IRAK2O43187 625 aa14.63□□□□□ -0.07
SNPH-203ENST00000614659 CNPP09543 421 aaKnown RBP14.63□□□□□ -0.07
SNPH-203ENST00000614659 DGKGP49619 791 aa14.63□□□□□ -0.07
SNPH-203ENST00000614659 PDGFRLQ15198 375 aa14.63□□□□□ -0.07
SNPH-203ENST00000614659 NDUFA5Q16718 116 aa14.63□□□□□ -0.07
SNPH-203ENST00000614659 PDPRQ8NCN5 879 aa14.63□□□□□ -0.07
SNPH-203ENST00000614659 PCED1BQ96HM7 432 aa14.63□□□□□ -0.07
SNPH-203ENST00000614659 AGAP2Q99490 1192 aa14.63□□□□□ -0.07
SNPH-203ENST00000614659 EPB41L4BQ9H329 900 aa14.63□□□□□ -0.07
SNPH-203ENST00000614659 WDR55Q9H6Y2 383 aaPredicted RBP14.63□□□□□ -0.07
SNPH-203ENST00000614659 CLN6Q9NWW5 311 aa14.63□□□□□ -0.07
SNPH-203ENST00000614659 SPATA2Q9UM82 520 aa14.63□□□□□ -0.07
SNPH-203ENST00000614659 CRYBG1Q9Y4K1 1723 aa14.63□□□□□ -0.07
SNPH-203ENST00000614659 INCA1Q0VD86 236 aa14.63□□□□□ -0.07
SNPH-203ENST00000614659 CDC73Q6P1J9 531 aa14.63□□□□□ -0.07
SNPH-203ENST00000614659 EIF3MQ7L2H7 374 aaKnown RBP14.63□□□□□ -0.07
SNPH-203ENST00000614659 C10orf53Q8N6V4 93 aa14.63□□□□□ -0.07
SNPH-203ENST00000614659 OR7A2PQ8NGA2 310 aa14.63□□□□□ -0.07
SNPH-203ENST00000614659 LRRC15Q8TF66 581 aa14.63□□□□□ -0.07
SNPH-203ENST00000614659 DNAJC1Q96KC8 554 aaKnown RBP14.63□□□□□ -0.07
SNPH-203ENST00000614659 IL23AQ9NPF7 189 aa14.63□□□□□ -0.07
SNPH-203ENST00000614659 TAF4O00268 1085 aa14.63□□□□□ -0.07
SNPH-203ENST00000614659 SNPHO15079 494 aa14.63□□□□□ -0.07
SNPH-203ENST00000614659 ITGAXP20702 1163 aa14.63□□□□□ -0.07
SNPH-203ENST00000614659 BLKP51451 505 aa14.63□□□□□ -0.07
SNPH-203ENST00000614659 PNLIPRP1P54315 467 aa14.63□□□□□ -0.07
SNPH-203ENST00000614659 RPS7P62081 194 aaKnown RBP14.63□□□□□ -0.07
SNPH-203ENST00000614659 TMEM63BQ5T3F8 832 aa14.63□□□□□ -0.07
SNPH-203ENST00000614659 ARMCX6Q7L4S7 300 aa14.63□□□□□ -0.07
SNPH-203ENST00000614659 HPS6Q86YV9 775 aa14.63□□□□□ -0.07
SNPH-203ENST00000614659 ZNF599Q96NL3 588 aa14.63□□□□□ -0.07
SNPH-203ENST00000614659 EPHX1P07099 455 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms