RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 ARF3P61204 181 aaPredicted RBP13.69□□□□□ -0.22
CHD1-212ENST00000614616 ARF1P84077 181 aaKnown RBP13.69□□□□□ -0.22
CHD1-212ENST00000614616 FAM131BQ86XD5 332 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 FCRL4Q96PJ5 515 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 CEP41Q9BYV8 373 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 MEMO1Q9Y316 297 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 DYRK3O43781 588 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 NOBOXO60393 691 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 ULK1O75385 1050 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 GSTT2P0CG29 244 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 ARFIP1P53367 373 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 MARC1Q5VT66 337 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 NEPROQ6NW34 567 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 CYP20A1Q6UW02 462 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 COLGALT2Q8IYK4 626 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 C8orf37Q96NL8 207 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 PKP2Q99959 881 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 TEX51A0A1B0GUA7 166 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 A8MV72 311 aaPredicted RBP13.69□□□□□ -0.22
CHD1-212ENST00000614616 L7N2F9 121 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 TP73O15350 636 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 FSHRP23945 695 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 GRIA2P42262 883 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 TSPAN5P62079 268 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 NFIAQ12857 509 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 COMMD7Q86VX2 200 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 PTGR2Q8N8N7 351 aaPredicted RBP13.69□□□□□ -0.22
CHD1-212ENST00000614616 FAM149AA5PLN7 773 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 DISC1C4P0D8 188 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 TRIM3O75382 744 aaPredicted RBP13.69□□□□□ -0.22
CHD1-212ENST00000614616 CBX5P45973 191 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 LZTR1Q8N653 840 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 ALG3Q92685 438 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 TSNAXQ99598 290 aaKnown RBP13.69□□□□□ -0.22
CHD1-212ENST00000614616 GPATCH2LQ9NWQ4 482 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 NAV1Q8NEY1 1877 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 TSTD3H0UI37 97 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 PPEF2O14830 753 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 SIM2Q14190 667 aaPredicted RBP13.69□□□□□ -0.22
CHD1-212ENST00000614616 ADGRD2Q7Z7M1 963 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 OR5K1Q8NHB7 308 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 PPM1MQ96MI6 270 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 ORAI2Q96SN7 254 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 RHOJQ9H4E5 214 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 LIN28AQ9H9Z2 209 aaKnown RBP13.69□□□□□ -0.22
CHD1-212ENST00000614616 MAP10Q9P2G4 905 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 LSM7Q9UK45 103 aaKnown RBP13.69□□□□□ -0.22
CHD1-212ENST00000614616 LMTK3Q96Q04 1460 aa13.69□□□□□ -0.22
CHD1-212ENST00000614616 LRRC14BA6NHZ5 514 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 FAM189A1O60320 539 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 CDKL1Q00532 357 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 PON2Q15165 354 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 IDNKQ5T6J7 187 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 BHLHE41Q9C0J9 482 aaPredicted RBP13.68□□□□□ -0.22
CHD1-212ENST00000614616 SLC7A5P2Q9GIP4 190 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 ATP6AP2O75787 350 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 PCSK2P16519 638 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 RPL38P63173 70 aaKnown RBP13.68□□□□□ -0.22
CHD1-212ENST00000614616 CYP1B1Q16678 543 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 ZNF438Q7Z4V0 828 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 SLC4A11Q8NBS3 891 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 TCTEX1D2Q8WW35 142 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 DBNDD1Q9H9R9 158 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 HMGXB4Q9UGU5 601 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 FAM50BQ9Y247 325 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 NEO1Q92859 1461 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 CLCA1A8K7I4 914 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 PITPNM1O00562 1244 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 PRODHO43272 600 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 ODC1P11926 461 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 CPB1P15086 417 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 FMO4P31512 558 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 FAM20CQ8IXL6 584 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 SACM1LQ9NTJ5 587 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 STK32BQ9NY57 414 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 DNAJB9Q9UBS3 223 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 SMCO3A2RU48 225 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 F5H5T6 163 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 TNFRSF11BO00300 401 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 SNAP29O95721 258 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 CD40LGP29965 261 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 ILDR2Q71H61 639 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 DET1Q7L5Y6 550 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 RALGPS2Q86X27 583 aaPredicted RBP13.68□□□□□ -0.22
CHD1-212ENST00000614616 BTRCQ9Y297 605 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 IFNGP01579 166 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 ANXA3P12429 323 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 FASTKD3Q14CZ7 662 aaKnown RBP13.68□□□□□ -0.22
CHD1-212ENST00000614616 C4orf46Q504U0 113 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 LINGO2Q7L985 606 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 SYNPOQ8N3V7 929 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 OR4A15Q8NGL6 344 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 ZNF668Q96K58 619 aaPredicted RBP13.68□□□□□ -0.22
CHD1-212ENST00000614616 WDR55Q9H6Y2 383 aaPredicted RBP13.68□□□□□ -0.22
CHD1-212ENST00000614616 TARBP1Q13395 1621 aaKnown RBP13.68□□□□□ -0.22
CHD1-212ENST00000614616 IPO13O94829 963 aaKnown RBP13.68□□□□□ -0.22
CHD1-212ENST00000614616 HLA-DQA2P01906 255 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 ZNF182P17025 639 aaPredicted RBP13.68□□□□□ -0.22
CHD1-212ENST00000614616 EPORP19235 508 aa13.68□□□□□ -0.22
CHD1-212ENST00000614616 RPL35P42766 123 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms