RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 DDX39BQ13838 428 aaKnown RBP11.71□□□□□ -0.53
CDH5-208ENST00000614547 GRIK4Q16099 956 aa11.71□□□□□ -0.53
CDH5-208ENST00000614547 FSCN1Q16658 493 aaKnown RBP11.71□□□□□ -0.53
CDH5-208ENST00000614547 ANKRD34AQ69YU3 496 aa11.71□□□□□ -0.53
CDH5-208ENST00000614547 ITIH5Q86UX2 942 aa11.71□□□□□ -0.53
CDH5-208ENST00000614547 UTP15Q8TED0 518 aaKnown RBP11.71□□□□□ -0.53
CDH5-208ENST00000614547 CDCA5Q96FF9 252 aa11.71□□□□□ -0.53
CDH5-208ENST00000614547 DUSP16Q9BY84 665 aa11.71□□□□□ -0.53
CDH5-208ENST00000614547 PRRG3Q9BZD7 231 aa11.71□□□□□ -0.53
CDH5-208ENST00000614547 CATSPERBQ9H7T0 1116 aa11.71□□□□□ -0.53
CDH5-208ENST00000614547 LATS2Q9NRM7 1088 aa11.71□□□□□ -0.53
CDH5-208ENST00000614547 MRGBPQ9NV56 204 aa11.71□□□□□ -0.53
CDH5-208ENST00000614547 PCDH10Q9P2E7 1040 aa11.71□□□□□ -0.53
CDH5-208ENST00000614547 PCDHB3Q9Y5E6 796 aa11.71□□□□□ -0.53
CDH5-208ENST00000614547 NRAPQ86VF7 1730 aa11.71□□□□□ -0.53
CDH5-208ENST00000614547 AQP12BA6NM10 295 aa11.71□□□□□ -0.53
CDH5-208ENST00000614547 PDZK1P1A8MUH7 402 aa11.71□□□□□ -0.53
CDH5-208ENST00000614547 OR4F21O95013 312 aa11.71□□□□□ -0.53
CDH5-208ENST00000614547 LRATO95237 230 aa11.71□□□□□ -0.53
CDH5-208ENST00000614547 C8BP07358 591 aa11.71□□□□□ -0.53
CDH5-208ENST00000614547 MYF6P23409 242 aa11.71□□□□□ -0.53
CDH5-208ENST00000614547 POU1F1P28069 291 aa11.71□□□□□ -0.53
CDH5-208ENST00000614547 POLR2IP36954 125 aaKnown RBP11.71□□□□□ -0.53
CDH5-208ENST00000614547 HPCAL1P37235 193 aa11.71□□□□□ -0.53
CDH5-208ENST00000614547 PLA2G16P53816 162 aa11.71□□□□□ -0.53
CDH5-208ENST00000614547 RPL38P63173 70 aaKnown RBP11.71□□□□□ -0.53
CDH5-208ENST00000614547 DAG1Q14118 895 aa11.71□□□□□ -0.53
CDH5-208ENST00000614547 RFTN1Q14699 578 aaPredicted RBP11.71□□□□□ -0.53
CDH5-208ENST00000614547 THOC7Q6I9Y2 204 aaKnown RBP11.71□□□□□ -0.53
CDH5-208ENST00000614547 SLC27A1Q6PCB7 646 aa11.71□□□□□ -0.53
CDH5-208ENST00000614547 ZNF773Q6PK81 442 aa11.71□□□□□ -0.53
CDH5-208ENST00000614547 AQP12AQ8IXF9 295 aa11.71□□□□□ -0.53
CDH5-208ENST00000614547 ANKFN1Q8N957 763 aa11.71□□□□□ -0.53
CDH5-208ENST00000614547 FAR1Q8WVX9 515 aa11.71□□□□□ -0.53
CDH5-208ENST00000614547 ACTR3BQ9P1U1 418 aa11.71□□□□□ -0.53
CDH5-208ENST00000614547 ABT1Q9ULW3 272 aaKnown RBP11.71□□□□□ -0.53
CDH5-208ENST00000614547 ERGIC3Q9Y282 383 aa11.71□□□□□ -0.53
CDH5-208ENST00000614547 NPEPPSL1A6NEC2 478 aa11.71□□□□□ -0.54
CDH5-208ENST00000614547 TSC22D2O75157 780 aa11.71□□□□□ -0.54
CDH5-208ENST00000614547 GABBR2O75899 941 aa11.71□□□□□ -0.54
CDH5-208ENST00000614547 CNTN5O94779 1100 aa11.71□□□□□ -0.54
CDH5-208ENST00000614547 GPIP06744 558 aa11.71□□□□□ -0.54
CDH5-208ENST00000614547 CNPP09543 421 aaKnown RBP11.71□□□□□ -0.54
CDH5-208ENST00000614547 CCDC159P0C7I6 412 aa11.71□□□□□ -0.54
CDH5-208ENST00000614547 SHMT2P34897 504 aa11.71□□□□□ -0.54
CDH5-208ENST00000614547 NCS1P62166 190 aa11.71□□□□□ -0.54
CDH5-208ENST00000614547 SH3BP2P78314 561 aa11.71□□□□□ -0.54
CDH5-208ENST00000614547 GSTM4Q03013 218 aa11.71□□□□□ -0.54
CDH5-208ENST00000614547 RAD51Q06609 339 aa11.71□□□□□ -0.54
CDH5-208ENST00000614547 PRKG2Q13237 762 aa11.71□□□□□ -0.54
CDH5-208ENST00000614547 C11orf74Q86VG3 221 aa11.71□□□□□ -0.54
CDH5-208ENST00000614547 UNC93AQ86WB7 457 aa11.71□□□□□ -0.54
CDH5-208ENST00000614547 METTL23Q86XA0 190 aa11.71□□□□□ -0.54
CDH5-208ENST00000614547 APOBEC3FQ8IUX4 373 aaKnown RBP11.71□□□□□ -0.54
CDH5-208ENST00000614547 TPD52L3Q96J77 140 aa11.71□□□□□ -0.54
CDH5-208ENST00000614547 TEPSINQ96N21 525 aa11.71□□□□□ -0.54
CDH5-208ENST00000614547 CITED4Q96RK1 184 aa11.71□□□□□ -0.54
CDH5-208ENST00000614547 ABI2Q9NYB9 513 aaPredicted RBP11.71□□□□□ -0.54
CDH5-208ENST00000614547 GALPQ9UBC7 116 aa11.71□□□□□ -0.54
CDH5-208ENST00000614547 PKP3Q9Y446 797 aa11.71□□□□□ -0.54
CDH5-208ENST00000614547 SMIM28A0A1B0GU29 152 aa11.7□□□□□ -0.54
CDH5-208ENST00000614547 BCAS1O75363 584 aaPredicted RBP11.7□□□□□ -0.54
CDH5-208ENST00000614547 MYL3P08590 195 aa11.7□□□□□ -0.54
CDH5-208ENST00000614547 ALDOCP09972 364 aaKnown RBP11.7□□□□□ -0.54
CDH5-208ENST00000614547 CLCN5P51795 746 aa11.7□□□□□ -0.54
CDH5-208ENST00000614547 ARSFP54793 590 aa11.7□□□□□ -0.54
CDH5-208ENST00000614547 C1QTNF12Q5T7M4 302 aa11.7□□□□□ -0.54
CDH5-208ENST00000614547 LZTR1Q8N653 840 aa11.7□□□□□ -0.54
CDH5-208ENST00000614547 OR2T12Q8NG77 320 aa11.7□□□□□ -0.54
CDH5-208ENST00000614547 OR6J1Q8NGC5 347 aa11.7□□□□□ -0.54
CDH5-208ENST00000614547 KLRG1Q96E93 195 aa11.7□□□□□ -0.54
CDH5-208ENST00000614547 FCRL2Q96LA5 508 aaPredicted RBP11.7□□□□□ -0.54
CDH5-208ENST00000614547 SENP8Q96LD8 212 aa11.7□□□□□ -0.54
CDH5-208ENST00000614547 RPRD1AQ96P16 312 aaPredicted RBP11.7□□□□□ -0.54
CDH5-208ENST00000614547 ACTR8Q9H981 624 aa11.7□□□□□ -0.54
CDH5-208ENST00000614547 TRMT6Q9UJA5 497 aaKnown RBP11.7□□□□□ -0.54
CDH5-208ENST00000614547 ZNF112Q9UJU3 913 aa11.7□□□□□ -0.54
CDH5-208ENST00000614547 GMPPBQ9Y5P6 360 aa11.7□□□□□ -0.54
CDH5-208ENST00000614547 DNAJC15Q9Y5T4 150 aa11.7□□□□□ -0.54
CDH5-208ENST00000614547 TCRBV3S1A0A5B6 114 aa11.7□□□□□ -0.54
CDH5-208ENST00000614547 CYBBP04839 570 aa11.7□□□□□ -0.54
CDH5-208ENST00000614547 HLA-DQB2P05538 268 aa11.7□□□□□ -0.54
CDH5-208ENST00000614547 PRSS56P0CW18 603 aa11.7□□□□□ -0.54
CDH5-208ENST00000614547 BMP2P12643 396 aa11.7□□□□□ -0.54
CDH5-208ENST00000614547 IDO1P14902 403 aa11.7□□□□□ -0.54
CDH5-208ENST00000614547 SLC6A2P23975 617 aa11.7□□□□□ -0.54
CDH5-208ENST00000614547 AGTR2P50052 363 aa11.7□□□□□ -0.54
CDH5-208ENST00000614547 CTBSQ01459 385 aa11.7□□□□□ -0.54
CDH5-208ENST00000614547 PAGE3Q5JUK9 113 aa11.7□□□□□ -0.54
CDH5-208ENST00000614547 TBPL2Q6SJ96 375 aa11.7□□□□□ -0.54
CDH5-208ENST00000614547 GPR152Q8TDT2 470 aa11.7□□□□□ -0.54
CDH5-208ENST00000614547 UBASH3BQ8TF42 649 aa11.7□□□□□ -0.54
CDH5-208ENST00000614547 LPPQ93052 612 aa11.7□□□□□ -0.54
CDH5-208ENST00000614547 ROPN1LQ96C74 230 aa11.7□□□□□ -0.54
CDH5-208ENST00000614547 DEPDC7Q96QD5 511 aa11.7□□□□□ -0.54
CDH5-208ENST00000614547 GAD1Q99259 594 aa11.7□□□□□ -0.54
CDH5-208ENST00000614547 VAT1Q99536 393 aa11.7□□□□□ -0.54
CDH5-208ENST00000614547 SEZ6LQ9BYH1 1024 aa11.7□□□□□ -0.54
CDH5-208ENST00000614547 SLC39A8Q9C0K1 460 aa11.7□□□□□ -0.54
CDH5-208ENST00000614547 WDR12Q9GZL7 423 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms