RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 KLK8O60259 260 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ACSL4O60488 711 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 NBNO60934 754 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 HOXD9P28356 352 aaPredicted RBP10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 PIGFQ07326 219 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 EFEMP1Q12805 493 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ZNF423Q2M1K9 1284 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 CCDC92Q53HC0 331 aaPredicted RBP10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 OGFRL1Q5TC84 451 aaPredicted RBP10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 TMEM53Q6P2H8 277 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ISCA2Q86U28 154 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 HEATR4Q86WZ0 1026 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 GPR65Q8IYL9 337 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 LPGAT1Q92604 370 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 DLG3Q92796 817 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 SEPHS2Q99611 448 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 DGCR6LQ9BY27 220 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 C6orf203Q9P0P8 240 aaPredicted RBP10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 TSR3Q9UJK0 312 aaKnown RBP10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 DNMT3LQ9UJW3 386 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 COMMD10Q9Y6G5 202 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 CARNS1A5YM72 827 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 A8MT66 165 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 H7C0S8 307 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ATE1O95260 518 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 DSC2Q02487 901 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 SULT2A1Q06520 285 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 MAPRE2Q15555 327 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 PGS1Q32NB8 556 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 MGAT5BQ3V5L5 792 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 FAM171A1Q5VUB5 890 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 GALNT18Q6P9A2 607 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ARMCX6Q7L4S7 300 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 FAM126BQ8IXS8 530 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 CBR4Q8N4T8 237 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ATXN3LQ9H3M9 355 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 GSTO2Q9H4Y5 243 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 CNOT11Q9UKZ1 510 aaKnown RBP10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 E7ENX8 843 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 GFRA2O00451 464 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 AP1G1O43747 822 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 NDST3O95803 873 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 GALTP07902 379 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 SLC11A1P49279 550 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 TUFMP49411 452 aaKnown RBP10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ZNF140P52738 457 aaPredicted RBP10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 SLC12A2P55011 1212 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 SPIDRQ14159 915 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 SQLEQ14534 574 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 TRIM16LQ309B1 348 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 RNF19BQ6ZMZ0 732 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 SLAIN1Q8ND83 568 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 HPS1Q92902 700 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 GPATCH1Q9BRR8 931 aaKnown RBP10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 MIR1-1HGQ9H1L0 117 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 CEP350Q5VT06 3117 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 TTC3P53804 2025 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 CLDN11O75508 207 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 F11P03951 625 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 CD1DP15813 335 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 EEF1DP29692 281 aaKnown RBP10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 SFSWAPQ12872 951 aaKnown RBP10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 CAPRIN1Q14444 709 aaKnown RBP10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 KIF19Q2TAC6 998 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ZNF678Q5SXM1 525 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 RBM20Q5T481 1227 aaKnown RBP10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 MRNIPQ6NTE8 343 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 RSPO2Q6UXX9 243 aaPredicted RBP10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 BBS5Q8N3I7 341 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 MARVELD2Q8N4S9 558 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 TMCO5AQ8N6Q1 288 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 BTBD9Q96Q07 612 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 TTPALQ9BTX7 342 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 CRISPLD1Q9H336 500 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 POMKQ9H5K3 350 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 EFCAB1Q9HAE3 211 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 POLR3BQ9NW08 1133 aaPredicted RBP10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 UXTQ9UBK9 157 aaPredicted RBP10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 SEPT3Q9UH03 358 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 TCAF2A6NFQ2 919 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 H0YJX3 145 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ABLIM3O94929 683 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ELNP15502 786 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 GRIK2Q13002 908 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 TAF1AQ15573 450 aaPredicted RBP10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 UGT3A2Q3SY77 523 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 RAP1GAP2Q684P5 730 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 TMEM207Q6UWW9 146 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 Q8N9G6 341 aaPredicted RBP10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ATAD1Q8NBU5 361 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 DDI1Q8WTU0 396 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 SEPT8Q92599 483 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 OSBPL6Q9BZF3 934 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 NDEL1Q9GZM8 345 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 CXorf21Q9HAI6 301 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 PLGRKTQ9HBL7 147 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 PRM3Q9NNZ6 103 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 DAPK2Q9UIK4 370 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 VPS9D1Q9Y2B5 631 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 TMEM247A6NEH6 219 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms