RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 VPS9D1Q9Y2B5 631 aa14.58□□□□□ -0.08
CD48-203ENST00000613788 EML5Q05BV3 1969 aa14.58□□□□□ -0.08
CD48-203ENST00000613788 FAM159BA6NKW6 160 aa14.57□□□□□ -0.08
CD48-203ENST00000613788 PRR5-ARHGAP8B1AHC4 643 aa14.57□□□□□ -0.08
CD48-203ENST00000613788 MAGEC1O60732 1142 aa14.57□□□□□ -0.08
CD48-203ENST00000613788 NDUFS3O75489 264 aa14.57□□□□□ -0.08
CD48-203ENST00000613788 RALBP11234 206 aa14.57□□□□□ -0.08
CD48-203ENST00000613788 GNSP15586 552 aa14.57□□□□□ -0.08
CD48-203ENST00000613788 ITPKAP23677 461 aa14.57□□□□□ -0.08
CD48-203ENST00000613788 CD38P28907 300 aa14.57□□□□□ -0.08
CD48-203ENST00000613788 CDKN1CP49918 316 aaPredicted RBP14.57□□□□□ -0.08
CD48-203ENST00000613788 PFN3P60673 137 aa14.57□□□□□ -0.08
CD48-203ENST00000613788 CDK3Q00526 305 aa14.57□□□□□ -0.08
CD48-203ENST00000613788 OVGP1Q12889 678 aa14.57□□□□□ -0.08
CD48-203ENST00000613788 ITIH4Q14624 930 aa14.57□□□□□ -0.08
CD48-203ENST00000613788 SMAD1Q15797 465 aaKnown RBP14.57□□□□□ -0.08
CD48-203ENST00000613788 KLHL38Q2WGJ6 581 aa14.57□□□□□ -0.08
CD48-203ENST00000613788 GPRC6AQ5T6X5 926 aa14.57□□□□□ -0.08
CD48-203ENST00000613788 RNF187Q5TA31 235 aaPredicted RBP14.57□□□□□ -0.08
CD48-203ENST00000613788 ZNF470Q6ECI4 717 aa14.57□□□□□ -0.08
CD48-203ENST00000613788 IQCHQ86VS3 1027 aa14.57□□□□□ -0.08
CD48-203ENST00000613788 SLC26A11Q86WA9 606 aa14.57□□□□□ -0.08
CD48-203ENST00000613788 DCP2Q8IU60 420 aaKnown RBP14.57□□□□□ -0.08
CD48-203ENST00000613788 CILP2Q8IUL8 1156 aa14.57□□□□□ -0.08
CD48-203ENST00000613788 CTAGE3PQ8IX95 158 aa14.57□□□□□ -0.08
CD48-203ENST00000613788 DDHD1Q8NEL9 900 aa14.57□□□□□ -0.08
CD48-203ENST00000613788 FUBP1Q96AE4 644 aaKnown RBP14.57□□□□□ -0.08
CD48-203ENST00000613788 KLHDC7BQ96G42 594 aa14.57□□□□□ -0.08
CD48-203ENST00000613788 DCUN1D1Q96GG9 259 aa14.57□□□□□ -0.08
CD48-203ENST00000613788 COX14Q96I36 57 aa14.57□□□□□ -0.08
CD48-203ENST00000613788 SLC6A18Q96N87 628 aa14.57□□□□□ -0.08
CD48-203ENST00000613788 COPS8Q99627 209 aa14.57□□□□□ -0.08
CD48-203ENST00000613788 CCDC77Q9BR77 488 aa14.57□□□□□ -0.08
CD48-203ENST00000613788 ACSS3Q9H6R3 686 aa14.57□□□□□ -0.08
CD48-203ENST00000613788 TRIM39Q9HCM9 518 aa14.57□□□□□ -0.08
CD48-203ENST00000613788 TM9SF3Q9HD45 589 aa14.57□□□□□ -0.08
CD48-203ENST00000613788 ZDHHC3Q9NYG2 299 aa14.57□□□□□ -0.08
CD48-203ENST00000613788 SUSD2Q9UGT4 822 aa14.57□□□□□ -0.08
CD48-203ENST00000613788 FBXO5Q9UKT4 447 aa14.57□□□□□ -0.08
CD48-203ENST00000613788 TMPRSS11EQ9UL52 423 aa14.57□□□□□ -0.08
CD48-203ENST00000613788 RAB23Q9ULC3 237 aa14.57□□□□□ -0.08
CD48-203ENST00000613788 CA5BQ9Y2D0 317 aa14.57□□□□□ -0.08
CD48-203ENST00000613788 OR1A2Q9Y585 309 aa14.57□□□□□ -0.08
CD48-203ENST00000613788 LRRK1Q38SD2 2015 aa14.57□□□□□ -0.08
CD48-203ENST00000613788 CFAP99D6REC4 459 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 BCAT2O15382 392 aaPredicted RBP14.56□□□□□ -0.08
CD48-203ENST00000613788 GPR39O43194 453 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 PRSS56P0CW18 603 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 MYCLP1P12525 358 aaPredicted RBP14.56□□□□□ -0.08
CD48-203ENST00000613788 ZNF7P17097 686 aaPredicted RBP14.56□□□□□ -0.08
CD48-203ENST00000613788 MSH3P20585 1137 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 KELP23276 732 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 HTR1BP28222 390 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 HSD17B3P37058 310 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 THOP1P52888 689 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 KIAA1024LP59773 190 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 ILF2Q12905 390 aaKnown RBP14.56□□□□□ -0.08
CD48-203ENST00000613788 CTBP1Q13363 440 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 NAB1Q13506 487 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 PTK2BQ14289 1009 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 TYSND1Q2T9J0 566 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 KBTBD12Q3ZCT8 623 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 Q6ZSR6 202 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 LRRC6Q86X45 466 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 DENND6AQ8IWF6 608 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 RBFAQ8N0V3 343 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 C1orf216Q8TAB5 229 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 ZCCHC2Q9C0B9 1178 aaKnown RBP14.56□□□□□ -0.08
CD48-203ENST00000613788 KCNH6Q9H252 994 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 ARFGAP3Q9NP61 516 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 INTS10Q9NVR2 710 aaKnown RBP14.56□□□□□ -0.08
CD48-203ENST00000613788 TXNDC16Q9P2K2 825 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 SCN8AQ9UQD0 1980 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 A0A1B0GTW7 788 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 H0Y8X5 98 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 VEGFDO43915 354 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 ASMTLO95671 621 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 THEGLP0DJG4 465 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 AKT1P31749 480 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 NSG1P42857 185 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 SLC1A2P43004 574 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 AFF3P51826 1226 aaKnown RBP14.56□□□□□ -0.08
CD48-203ENST00000613788 TMEM115Q12893 351 aaPredicted RBP14.56□□□□□ -0.08
CD48-203ENST00000613788 SEMA3AQ14563 771 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 TEAD4Q15561 434 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 DBN1Q16643 649 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 BEND6Q5SZJ8 279 aaPredicted RBP14.56□□□□□ -0.08
CD48-203ENST00000613788 UBAP2Q5T6F2 1119 aaKnown RBP14.56□□□□□ -0.08
CD48-203ENST00000613788 GALNT7Q86SF2 657 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 LDB1Q86U70 411 aaPredicted RBP14.56□□□□□ -0.08
CD48-203ENST00000613788 SYT12Q8IV01 421 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 PPM1NQ8N819 430 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 C2CD4AQ8NCU7 369 aaPredicted RBP14.56□□□□□ -0.08
CD48-203ENST00000613788 UHMK1Q8TAS1 419 aaKnown RBP14.56□□□□□ -0.08
CD48-203ENST00000613788 LOXL4Q96JB6 756 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 LGR4Q9BXB1 951 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 EPB41L4BQ9H329 900 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 PILRBQ9UKJ0 227 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 R4GN57 208 aa14.56□□□□□ -0.08
CD48-203ENST00000613788 PLXNA2O75051 1894 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms