RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 HMGN3Q15651 99 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 RALGPS1Q5JS13 557 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 ADGRD1Q6QNK2 874 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 SLFN11Q7Z7L1 901 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 SLC34A3Q8N130 599 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 PIH1D2Q8WWB5 315 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 CPA5Q8WXQ8 436 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 IP6K1Q92551 441 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 CORO2AQ92828 525 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 C8orf37Q96NL8 207 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 RAVER2Q9HCJ3 691 aaKnown RBP4.93□□□□□ -1.62
VPS13D-213ENST00000613099 E9PAM4 449 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 CERS1P27544 350 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 IDH3AP50213 366 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 EXOC3L2Q2M3D2 409 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 ZNF283Q8N7M2 679 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 C9orf43Q8TAL5 461 aaPredicted RBP4.93□□□□□ -1.62
VPS13D-213ENST00000613099 TM9SF3Q9HD45 589 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 ACAD8Q9UKU7 415 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 FARSAQ9Y285 508 aaKnown RBP4.93□□□□□ -1.62
VPS13D-213ENST00000613099 ADAP00813 363 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 FAM163BP0C2L3 166 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 BMP2P12643 396 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 PRKAR2AP13861 404 aaKnown RBP4.93□□□□□ -1.62
VPS13D-213ENST00000613099 GRIA1P42261 906 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 IDH2P48735 452 aaKnown RBP4.93□□□□□ -1.62
VPS13D-213ENST00000613099 APLP1P51693 650 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 TWF1Q12792 350 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 SF3B4Q15427 424 aaKnown RBP eCLIP4.93□□□□□ -1.625e-7■■■■■ 34.4
VPS13D-213ENST00000613099 SETMARQ53H47 684 aaPredicted RBP4.93□□□□□ -1.62
VPS13D-213ENST00000613099 IDNKQ5T6J7 187 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 LACC1Q8IV20 430 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 PLD5Q8N7P1 536 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 ZNF781Q8N8C0 355 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 TTLQ8NG68 377 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 OR13J1Q8NGT2 312 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 TNFAIP8L1Q8WVP5 186 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 SLC44A1Q8WWI5 657 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 LRRC4CQ9HCJ2 640 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 PRELID3BQ9Y3B1 194 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 SAMHD1Q9Y3Z3 626 aaKnown RBP4.93□□□□□ -1.62
VPS13D-213ENST00000613099 PCDHGB6Q9Y5F9 930 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 A8MV72 311 aaPredicted RBP4.93□□□□□ -1.62
VPS13D-213ENST00000613099 SLC30A4O14863 429 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 TXNL1O43396 289 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 SNAPINO95295 136 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 GNAO1P09471 354 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 HLA-EP13747 358 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 MAGEA12P43365 314 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 TSTA3Q13630 321 aaPredicted RBP4.93□□□□□ -1.62
VPS13D-213ENST00000613099 LRIF1Q5T3J3 769 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 KANK2Q63ZY3 851 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 ZNF34Q8IZ26 560 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 EFCAB3Q8N7B9 438 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 NRG4Q8WWG1 115 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 LENG8Q96PV6 779 aaPredicted RBP4.93□□□□□ -1.62
VPS13D-213ENST00000613099 AGXT2Q9BYV1 514 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 WWOXQ9NZC7 414 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 IKZF3Q9UKT9 509 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 INMT-MINDY4F8WBC2 141 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 HNRNPDLO14979 420 aaKnown RBP4.92□□□□□ -1.62
VPS13D-213ENST00000613099 LSM8O95777 96 aaKnown RBP4.92□□□□□ -1.62
VPS13D-213ENST00000613099 IL2RBP14784 551 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 DDOSTP39656 456 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 CASP3P42574 277 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 OR5T3Q8NGG3 340 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 BTBD2Q9BX70 525 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 FSD1LQ9BXM9 530 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 ZNF350Q9GZX5 532 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 TMEM216Q9P0N5 145 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 UGT2A1Q9Y4X1 527 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 KANTRA0A1W2PQU2 76 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 ULK1O75385 1050 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 SULT1C4O75897 302 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 ATP5F1P24539 256 aaPredicted RBP4.92□□□□□ -1.62
VPS13D-213ENST00000613099 HTRA4P83105 476 aaPredicted RBP4.92□□□□□ -1.62
VPS13D-213ENST00000613099 AVPI1Q5T686 147 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 FAM205BPQ63HN1 556 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 OLFML2AQ68BL7 652 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 NIM1KQ8IY84 436 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 ZNF655Q8N720 491 aaPredicted RBP4.92□□□□□ -1.62
VPS13D-213ENST00000613099 PSD4Q8NDX1 1056 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 AGAP2Q99490 1192 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 PKP2Q99959 881 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 TRMOQ9BU70 441 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 NPLQ9BXD5 320 aaPredicted RBP4.92□□□□□ -1.62
VPS13D-213ENST00000613099 ATXN3LQ9H3M9 355 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 ERVK-10P10266 1014 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 IGFBP5P24593 272 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 POU6F2P78424 691 aaPredicted RBP4.92□□□□□ -1.62
VPS13D-213ENST00000613099 KCTD19Q17RG1 926 aaPredicted RBP4.92□□□□□ -1.62
VPS13D-213ENST00000613099 DESI1Q6ICB0 168 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 TATDN1Q6P1N9 297 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 ZNF613Q6PF04 617 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 MOXD1Q6UVY6 613 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 LAPTM4BQ86VI4 370 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 ACOT12Q8WYK0 555 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 FAM120BQ96EK7 910 aaKnown RBP4.92□□□□□ -1.62
VPS13D-213ENST00000613099 FAM20AQ96MK3 541 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 RERGLQ9H628 205 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms