RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 ATP6V1B1P15313 513 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 CKMT2P17540 419 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 PSMC3P17980 439 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 GRIA3P42263 894 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 STX1BP61266 288 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 SMAD3P84022 425 aaKnown RBP13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 PLIN5Q00G26 463 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 RARS2Q5T160 578 aaKnown RBP13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 SLC8B1Q6J4K2 584 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 HMBOX1Q6NT76 420 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 AFTPHQ6ULP2 937 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 LYSMD3Q7Z3D4 306 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 RAB44Q7Z6P3 723 aaPredicted RBP13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 HERC6Q8IVU3 1022 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 CLDN19Q8N6F1 224 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 ZNF599Q96NL3 588 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 CIB1Q99828 191 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 VCX3BQ9H321 246 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 TFB2MQ9H5Q4 396 aaKnown RBP13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 COQ10BQ9H8M1 238 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 MTRRQ9UBK8 725 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 GBF1Q92538 1859 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 STX7O15400 261 aaKnown RBP13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 BAIAP3O94812 1187 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 MBL2P11226 248 aaPredicted RBP13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 LPOP22079 712 aaPredicted RBP13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 RPL10P27635 214 aaKnown RBP13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 RAD51Q06609 339 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 GALNT1Q10472 559 aaPredicted RBP13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 RBBP7Q16576 425 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 FUT11Q495W5 492 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 ADGRF1Q5T601 910 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 FAM151BQ6UXP7 276 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 TMEM150AQ86TG1 271 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 TICAM1Q8IUC6 712 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 APCDD1Q8J025 514 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 ARL14EPQ8N8R7 260 aaPredicted RBP13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 CDYL2Q8N8U2 506 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 STAG3L4Q8TBR4 150 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 CD200R1Q8TD46 325 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 SLC25A23Q9BV35 468 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 NOL11Q9H8H0 719 aaKnown RBP13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 TRPM5Q9NZQ8 1165 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 CD300AQ9UGN4 299 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 PHF24Q9UPV7 400 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 YIPF1Q9Y548 306 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 AP4S1Q9Y587 144 aa13.98□□□□□ -0.17
PCDHGA3-202ENST00000612467 A0A1B0GVM2 712 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 BNIP3LO60238 219 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 OR4F21O95013 312 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 PKMP14618 531 aaKnown RBP13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 GJA1P17302 382 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 SLC26A3P40879 764 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 CSKP41240 450 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 PIK3CGP48736 1102 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 HTR6P50406 440 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 HTRA3P83110 453 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 CREB5Q02930 508 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 USP41Q3LFD5 358 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 RABL3Q5HYI8 236 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 DNAJB14Q8TBM8 379 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 PIP4K2CQ8TBX8 421 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 LKAAEAR1Q8TD35 194 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 CANT1Q8WVQ1 401 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 EME1Q96AY2 570 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 TRMOQ9BU70 441 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 ZNF334Q9HCZ1 680 aaPredicted RBP13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 TMEM181Q9P2C4 612 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 PDP2Q9P2J9 529 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 LHX3Q9UBR4 397 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 V9GYQ6 96 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 MYOFQ9NZM1 2061 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 PLXNA4Q9HCM2 1894 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 ANAPC1Q9H1A4 1944 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 ILVBLA1L0T0 632 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 FXYD1O00168 92 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 KATNA1O75449 491 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 SMIM18P0DKX4 95 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 NCK1P16333 377 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 KPNA1P52294 538 aaPredicted RBP13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 CHN2P52757 468 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 UFM1P61960 85 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 MYBPC1Q00872 1141 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 LCP2Q13094 533 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 NOGQ13253 232 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 SPPL2CQ8IUH8 684 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 TTC30BQ8N4P2 665 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 GRIN3AQ8TCU5 1115 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 TMEM74Q96NL1 305 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 HGH1Q9BTY7 390 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 KLF16Q9BXK1 252 aaPredicted RBP13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 DERL2Q9GZP9 239 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 CD274Q9NZQ7 290 aa13.97□□□□□ -0.17
PCDHGA3-202ENST00000612467 LCHNA4D1U4 455 aa13.96□□□□□ -0.17
PCDHGA3-202ENST00000612467 GUCA1CO95843 209 aa13.96□□□□□ -0.17
PCDHGA3-202ENST00000612467 MT-ND1P03886 318 aa13.96□□□□□ -0.17
PCDHGA3-202ENST00000612467 MTHFD1P11586 935 aaKnown RBP13.96□□□□□ -0.17
PCDHGA3-202ENST00000612467 UGT1A1P22309 533 aa13.96□□□□□ -0.17
PCDHGA3-202ENST00000612467 UGT1A4P22310 534 aa13.96□□□□□ -0.17
PCDHGA3-202ENST00000612467 CA8P35219 290 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms