RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, human

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-223	ENST00000611614	TPGS1	Q6ZTW0	290 aa		13.82	□□□□□ -0.2
COPS7B-223	ENST00000611614	TICAM1	Q8IUC6	712 aa		13.82	□□□□□ -0.2
COPS7B-223	ENST00000611614	SLC22A9	Q8IVM8	553 aa		13.82	□□□□□ -0.2
COPS7B-223	ENST00000611614	AFAP1L2	Q8N4X5	818 aa		13.82	□□□□□ -0.2
COPS7B-223	ENST00000611614	CEP70	Q8NHQ1	597 aa		13.82	□□□□□ -0.2
COPS7B-223	ENST00000611614	MPP4	Q96JB8	637 aa		13.82	□□□□□ -0.2
COPS7B-223	ENST00000611614	SEMA3C	Q99985	751 aa		13.82	□□□□□ -0.2
COPS7B-223	ENST00000611614	CINP	Q9BW66	212 aa	Predicted RBP	13.82	□□□□□ -0.2
COPS7B-223	ENST00000611614	CYP4F12	Q9HCS2	524 aa		13.82	□□□□□ -0.2
COPS7B-223	ENST00000611614	TBC1D14	Q9P2M4	693 aa		13.82	□□□□□ -0.2
COPS7B-223	ENST00000611614	COPG1	Q9Y678	874 aa	Known RBP	13.82	□□□□□ -0.2
COPS7B-223	ENST00000611614	WISP3	O95389	354 aa	Predicted RBP	13.82	□□□□□ -0.2
COPS7B-223	ENST00000611614	KCNA5	P22460	613 aa		13.82	□□□□□ -0.2
COPS7B-223	ENST00000611614	SULT2A1	Q06520	285 aa		13.82	□□□□□ -0.2
COPS7B-223	ENST00000611614	ZNF707	Q96C28	371 aa	Predicted RBP	13.82	□□□□□ -0.2
COPS7B-223	ENST00000611614	RCN3	Q96D15	328 aa		13.82	□□□□□ -0.2
COPS7B-223	ENST00000611614	FEM1C	Q96JP0	617 aa		13.82	□□□□□ -0.2
COPS7B-223	ENST00000611614	DZANK1	Q9NVP4	752 aa		13.82	□□□□□ -0.2
COPS7B-223	ENST00000611614	MARCH4	Q9P2E8	410 aa	Predicted RBP	13.82	□□□□□ -0.2
COPS7B-223	ENST00000611614	CNOT11	Q9UKZ1	510 aa	Known RBP	13.82	□□□□□ -0.2
COPS7B-223	ENST00000611614	KCTD3	Q9Y597	815 aa		13.82	□□□□□ -0.2
COPS7B-223	ENST00000611614	CCL22	O00626	93 aa		13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	VILL	O15195	856 aa		13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	MOSPD3	O75425	235 aa		13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	CRTAM	O95727	393 aa		13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	TFAP2A	P05549	437 aa		13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	HLA-DPA1	P20036	260 aa		13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	HOXD9	P28356	352 aa	Predicted RBP	13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	CDKN2D	P55273	166 aa		13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	ACVR1	Q04771	509 aa		13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	FLOT2	Q14254	428 aa		13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	PRSS36	Q5K4E3	855 aa		13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	CXorf57	Q6NSI4	855 aa	Known RBP	13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	FAM45BP	Q6NSW5	357 aa		13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	RBM44	Q6ZP01	1051 aa	Known RBP	13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	LDB1	Q86U70	411 aa	Predicted RBP	13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	PGAM4	Q8N0Y7	254 aa		13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	OR52K2	Q8NGK3	314 aa		13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	FAM45A	Q8TCE6	357 aa		13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	ANKRD49	Q8WVL7	239 aa		13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	ING5	Q8WYH8	240 aa		13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	PEX13	Q92968	403 aa		13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	USP13	Q92995	863 aa	Predicted RBP	13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	MARK4	Q96L34	752 aa		13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	IGFLR1	Q9H665	355 aa		13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	EFCAB1	Q9HAE3	211 aa		13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	TIMMDC1	Q9NPL8	285 aa		13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	RIMS3	Q9UJD0	308 aa		13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	CCL26	Q9Y258	94 aa		13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	OR51F1	A6NGY5	319 aa		13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614		H0YJX3	145 aa		13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	NRG2	O14511	850 aa	Predicted RBP	13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	FGF1	P05230	155 aa		13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	PIGG	Q5H8A4	983 aa		13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	SPNS2	Q8IVW8	549 aa		13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	PELI3	Q8N2H9	469 aa		13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	C12orf76	Q8N812	135 aa	Predicted RBP	13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	PNPLA1	Q8N8W4	532 aa		13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	TIFA	Q96CG3	184 aa		13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	NMD3	Q96D46	503 aa	Known RBP	13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	CDRT15	Q96T59	188 aa		13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	GMEB1	Q9Y692	573 aa		13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	AP4B1	Q9Y6B7	739 aa		13.81	□□□□□ -0.2
COPS7B-223	ENST00000611614	PDE4DIP	Q5VU43	2346 aa		13.8	□□□□□ -0.2
COPS7B-223	ENST00000611614	MUSK	O15146	869 aa		13.8	□□□□□ -0.2
COPS7B-223	ENST00000611614	EPO	P01588	193 aa		13.8	□□□□□ -0.2
COPS7B-223	ENST00000611614	GALNT1	Q10472	559 aa	Predicted RBP	13.8	□□□□□ -0.2
COPS7B-223	ENST00000611614	ZNF423	Q2M1K9	1284 aa		13.8	□□□□□ -0.2
COPS7B-223	ENST00000611614	TMEM207	Q6UWW9	146 aa		13.8	□□□□□ -0.2
COPS7B-223	ENST00000611614	CUZD1	Q86UP6	607 aa		13.8	□□□□□ -0.2
COPS7B-223	ENST00000611614	GPR150	Q8NGU9	434 aa		13.8	□□□□□ -0.2
COPS7B-223	ENST00000611614	MRPL38	Q96DV4	380 aa	Known RBP	13.8	□□□□□ -0.2
COPS7B-223	ENST00000611614	TBATA	Q96M53	351 aa		13.8	□□□□□ -0.2
COPS7B-223	ENST00000611614	FEM1A	Q9BSK4	669 aa		13.8	□□□□□ -0.2
COPS7B-223	ENST00000611614	C2orf49	Q9BVC5	232 aa	Predicted RBP	13.8	□□□□□ -0.2
COPS7B-223	ENST00000611614	RBM38	Q9H0Z9	239 aa	Known RBP	13.8	□□□□□ -0.2
COPS7B-223	ENST00000611614	MEAF6	Q9HAF1	191 aa		13.8	□□□□□ -0.2
COPS7B-223	ENST00000611614	PDF	Q9HBH1	243 aa		13.8	□□□□□ -0.2
COPS7B-223	ENST00000611614	MRGBP	Q9NV56	204 aa		13.8	□□□□□ -0.2
COPS7B-223	ENST00000611614	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
COPS7B-223	ENST00000611614	KIAA1522	Q9P206	1035 aa	Predicted RBP	13.8	□□□□□ -0.2
COPS7B-223	ENST00000611614	GBF1	Q92538	1859 aa		13.8	□□□□□ -0.2
COPS7B-223	ENST00000611614	SLC9A3R1	O14745	358 aa	Predicted RBP	13.8	□□□□□ -0.2
COPS7B-223	ENST00000611614	GJB3	O75712	270 aa		13.8	□□□□□ -0.2
COPS7B-223	ENST00000611614	OR6B1	O95007	311 aa		13.8	□□□□□ -0.2
COPS7B-223	ENST00000611614	PGM3	O95394	542 aa		13.8	□□□□□ -0.2
COPS7B-223	ENST00000611614	GLP2R	O95838	553 aa		13.8	□□□□□ -0.2
COPS7B-223	ENST00000611614	FAM58BP	P0C7Q3	252 aa		13.8	□□□□□ -0.2
COPS7B-223	ENST00000611614	CEBPB	P17676	345 aa		13.8	□□□□□ -0.2
COPS7B-223	ENST00000611614	IMPDH1	P20839	514 aa		13.8	□□□□□ -0.2
COPS7B-223	ENST00000611614	ART3	Q13508	389 aa		13.8	□□□□□ -0.2
COPS7B-223	ENST00000611614	APOF	Q13790	326 aa		13.8	□□□□□ -0.2
COPS7B-223	ENST00000611614	CBX2	Q14781	532 aa	Predicted RBP	13.8	□□□□□ -0.2
COPS7B-223	ENST00000611614	CHSY3	Q70JA7	882 aa		13.8	□□□□□ -0.2
COPS7B-223	ENST00000611614	TDH	Q8IZJ6	230 aa		13.8	□□□□□ -0.2
COPS7B-223	ENST00000611614	BLOC1S5	Q8TDH9	187 aa		13.8	□□□□□ -0.2
COPS7B-223	ENST00000611614	GFM2	Q969S9	779 aa	Known RBP	13.8	□□□□□ -0.2
COPS7B-223	ENST00000611614	WDR41	Q9HAD4	459 aa		13.8	□□□□□ -0.2
COPS7B-223	ENST00000611614	MRPL40	Q9NQ50	206 aa	Known RBP	13.8	□□□□□ -0.2
COPS7B-223	ENST00000611614	RIMKLB	Q9ULI2	386 aa		13.8	□□□□□ -0.2

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