RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 HTRA2O43464 458 aaPredicted RBP15.89■□□□□ 0.13
RTN1-209ENST00000611068 CNPP09543 421 aaKnown RBP15.89■□□□□ 0.13
RTN1-209ENST00000611068 CCNA2P20248 432 aa15.89■□□□□ 0.13
RTN1-209ENST00000611068 SEMA5AQ13591 1074 aa15.89■□□□□ 0.13
RTN1-209ENST00000611068 CEACAM7Q14002 265 aa15.89■□□□□ 0.13
RTN1-209ENST00000611068 NEDD8Q15843 81 aa15.89■□□□□ 0.13
RTN1-209ENST00000611068 PRR23CQ6ZRP0 262 aa15.89■□□□□ 0.13
RTN1-209ENST00000611068 BEND5Q7L4P6 421 aa15.89■□□□□ 0.13
RTN1-209ENST00000611068 CHST15Q7LFX5 561 aaPredicted RBP15.89■□□□□ 0.13
RTN1-209ENST00000611068 FAM156AQ8NDB6 213 aa15.89■□□□□ 0.13
RTN1-209ENST00000611068 LRTOMTQ8WZ04 291 aa15.89■□□□□ 0.13
RTN1-209ENST00000611068 PABPC5Q96DU9 382 aaKnown RBP15.89■□□□□ 0.13
RTN1-209ENST00000611068 HMCESQ96FZ2 354 aa15.89■□□□□ 0.13
RTN1-209ENST00000611068 CIB1Q99828 191 aa15.89■□□□□ 0.13
RTN1-209ENST00000611068 C2orf49Q9BVC5 232 aaPredicted RBP15.89■□□□□ 0.13
RTN1-209ENST00000611068 ANKRD60Q9BZ19 345 aa15.89■□□□□ 0.13
RTN1-209ENST00000611068 CATSPERBQ9H7T0 1116 aa15.89■□□□□ 0.13
RTN1-209ENST00000611068 FKBP14Q9NWM8 211 aa15.89■□□□□ 0.13
RTN1-209ENST00000611068 CFLARO15519 480 aa15.89■□□□□ 0.13
RTN1-209ENST00000611068 SCO2O43819 266 aa15.89■□□□□ 0.13
RTN1-209ENST00000611068 GJB3O75712 270 aa15.89■□□□□ 0.13
RTN1-209ENST00000611068 ABLIM3O94929 683 aa15.89■□□□□ 0.13
RTN1-209ENST00000611068 INHBAP08476 426 aa15.89■□□□□ 0.13
RTN1-209ENST00000611068 LAG3P18627 525 aa15.89■□□□□ 0.13
RTN1-209ENST00000611068 TCN1P20061 433 aaPredicted RBP15.89■□□□□ 0.13
RTN1-209ENST00000611068 ATP5C1P36542 298 aaKnown RBP15.89■□□□□ 0.13
RTN1-209ENST00000611068 ATP6V0D1P61421 351 aa15.89■□□□□ 0.13
RTN1-209ENST00000611068 ITKQ08881 620 aa15.89■□□□□ 0.13
RTN1-209ENST00000611068 TRIP4Q15650 581 aaPredicted RBP15.89■□□□□ 0.13
RTN1-209ENST00000611068 SMU1Q2TAY7 513 aa15.89■□□□□ 0.13
RTN1-209ENST00000611068 TJAP1Q5JTD0 557 aa15.89■□□□□ 0.13
RTN1-209ENST00000611068 MANEALQ5VSG8 457 aa15.89■□□□□ 0.13
RTN1-209ENST00000611068 MSANTD2Q6P1R3 559 aa15.89■□□□□ 0.13
RTN1-209ENST00000611068 UNC5AQ6ZN44 842 aa15.89■□□□□ 0.13
RTN1-209ENST00000611068 DNAJB7Q7Z6W7 309 aaPredicted RBP15.89■□□□□ 0.13
RTN1-209ENST00000611068 LGI2Q8N0V4 545 aa15.89■□□□□ 0.13
RTN1-209ENST00000611068 DTX3Q8N9I9 347 aa15.89■□□□□ 0.13
RTN1-209ENST00000611068 DNAAF3Q8N9W5 541 aa15.89■□□□□ 0.13
RTN1-209ENST00000611068 SIGLEC10Q96LC7 697 aa15.89■□□□□ 0.13
RTN1-209ENST00000611068 IL12RB2Q99665 862 aa15.89■□□□□ 0.13
RTN1-209ENST00000611068 SMYD2Q9NRG4 433 aa15.89■□□□□ 0.13
RTN1-209ENST00000611068 DUS2Q9NX74 493 aaKnown RBP15.89■□□□□ 0.13
RTN1-209ENST00000611068 IKBKGQ9Y6K9 419 aa15.89■□□□□ 0.13
RTN1-209ENST00000611068 MX2P20592 715 aa15.88■□□□□ 0.13
RTN1-209ENST00000611068 SLC6A4P31645 630 aa15.88■□□□□ 0.13
RTN1-209ENST00000611068 COPZ1P61923 177 aa15.88■□□□□ 0.13
RTN1-209ENST00000611068 RPS24P62847 133 aaKnown RBP15.88■□□□□ 0.13
RTN1-209ENST00000611068 TXNDC8Q6A555 127 aa15.88■□□□□ 0.13
RTN1-209ENST00000611068 PIWIL3Q7Z3Z3 882 aaKnown RBP15.88■□□□□ 0.13
RTN1-209ENST00000611068 AKAP14Q86UN6 197 aa15.88■□□□□ 0.13
RTN1-209ENST00000611068 PIWIL2Q8TC59 973 aaKnown RBP15.88■□□□□ 0.13
RTN1-209ENST00000611068 BRSK1Q8TDC3 778 aa15.88■□□□□ 0.13
RTN1-209ENST00000611068 PDCD6IPQ8WUM4 868 aaKnown RBP15.88■□□□□ 0.13
RTN1-209ENST00000611068 HDAC11Q96DB2 347 aa15.88■□□□□ 0.13
RTN1-209ENST00000611068 SH3YL1Q96HL8 342 aaPredicted RBP15.88■□□□□ 0.13
RTN1-209ENST00000611068 CDK5RAP1Q96SZ6 601 aaKnown RBP15.88■□□□□ 0.13
RTN1-209ENST00000611068 MLPHQ9BV36 600 aaPredicted RBP15.88■□□□□ 0.13
RTN1-209ENST00000611068 NEK6Q9HC98 313 aa15.88■□□□□ 0.13
RTN1-209ENST00000611068 PNPOQ9NVS9 261 aa15.88■□□□□ 0.13
RTN1-209ENST00000611068 SYBUQ9NX95 663 aa15.88■□□□□ 0.13
RTN1-209ENST00000611068 PCDHB12Q9Y5F1 795 aa15.88■□□□□ 0.13
RTN1-209ENST00000611068 NRG2O14511 850 aaPredicted RBP15.88■□□□□ 0.13
RTN1-209ENST00000611068 NUAK1O60285 661 aa15.88■□□□□ 0.13
RTN1-209ENST00000611068 MAFKO60675 156 aa15.88■□□□□ 0.13
RTN1-209ENST00000611068 CXCL14O95715 111 aa15.88■□□□□ 0.13
RTN1-209ENST00000611068 KLKB1P03952 638 aa15.88■□□□□ 0.13
RTN1-209ENST00000611068 ALOX5P09917 674 aa15.88■□□□□ 0.13
RTN1-209ENST00000611068 ACVRL1P37023 503 aa15.88■□□□□ 0.13
RTN1-209ENST00000611068 SGSHP51688 502 aa15.88■□□□□ 0.13
RTN1-209ENST00000611068 FOXD4Q12950 439 aaPredicted RBP15.88■□□□□ 0.13
RTN1-209ENST00000611068 MTX3Q5HYI7 312 aa15.88■□□□□ 0.13
RTN1-209ENST00000611068 CERCAMQ5T4B2 595 aa15.88■□□□□ 0.13
RTN1-209ENST00000611068 DDX53Q86TM3 631 aaKnown RBP15.88■□□□□ 0.13
RTN1-209ENST00000611068 RTL3Q8N8U3 475 aaKnown RBP15.88■□□□□ 0.13
RTN1-209ENST00000611068 SLC44A1Q8WWI5 657 aa15.88■□□□□ 0.13
RTN1-209ENST00000611068 BTN2A3PQ96KV6 586 aa15.88■□□□□ 0.13
RTN1-209ENST00000611068 ZNF347Q96SE7 839 aa15.88■□□□□ 0.13
RTN1-209ENST00000611068 FANCEQ9HB96 536 aa15.88■□□□□ 0.13
RTN1-209ENST00000611068 ZNF334Q9HCZ1 680 aaPredicted RBP15.88■□□□□ 0.13
RTN1-209ENST00000611068 SEPT3Q9UH03 358 aa15.88■□□□□ 0.13
RTN1-209ENST00000611068 DNMT3LQ9UJW3 386 aa15.88■□□□□ 0.13
RTN1-209ENST00000611068 DOCK6Q96HP0 2047 aa15.88■□□□□ 0.13
RTN1-209ENST00000611068 AP3B1O00203 1094 aa15.87■□□□□ 0.13
RTN1-209ENST00000611068 MTRF1O75570 445 aaKnown RBP15.87■□□□□ 0.13
RTN1-209ENST00000611068 ALX3O95076 343 aa15.87■□□□□ 0.13
RTN1-209ENST00000611068 OR1E1P30953 314 aa15.87■□□□□ 0.13
RTN1-209ENST00000611068 RACK1P63244 317 aaKnown RBP15.87■□□□□ 0.13
RTN1-209ENST00000611068 PPP2R2BQ00005 443 aa15.87■□□□□ 0.13
RTN1-209ENST00000611068 TNK2Q07912 1038 aa15.87■□□□□ 0.13
RTN1-209ENST00000611068 BMPR2Q13873 1038 aa15.87■□□□□ 0.13
RTN1-209ENST00000611068 SPCS2Q15005 226 aa15.87■□□□□ 0.13
RTN1-209ENST00000611068 HECTD3Q5T447 861 aa15.87■□□□□ 0.13
RTN1-209ENST00000611068 CMTR2Q8IYT2 770 aaKnown RBP15.87■□□□□ 0.13
RTN1-209ENST00000611068 HS6ST3Q8IZP7 471 aa15.87■□□□□ 0.13
RTN1-209ENST00000611068 ABHD11Q8NFV4 315 aa15.87■□□□□ 0.13
RTN1-209ENST00000611068 PSMG2Q969U7 264 aa15.87■□□□□ 0.13
RTN1-209ENST00000611068 ZYG11BQ9C0D3 744 aa15.87■□□□□ 0.13
RTN1-209ENST00000611068 MCOLN1Q9GZU1 580 aa15.87■□□□□ 0.13
RTN1-209ENST00000611068 RBM22Q9NW64 420 aaKnown RBP eCLIP15.87■□□□□ 0.13
RTN1-209ENST00000611068 DGKBQ9Y6T7 804 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms