RNA–Protein interactions for RNA: ENST00000610488.4

PPHLN1-223, Transcript of periphilin 1, human

TSL 5 BASIC

Gene PPHLN1, Length 1,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPHLN1-223	ENST00000610488	MYOC	Q99972	504 aa		13.52	□□□□□ -0.25
PPHLN1-223	ENST00000610488	KDM4C	Q9H3R0	1056 aa		13.52	□□□□□ -0.25
PPHLN1-223	ENST00000610488	TRABD	Q9H4I3	376 aa		13.52	□□□□□ -0.25
PPHLN1-223	ENST00000610488	MRM3	Q9HC36	420 aa	Known RBP	13.52	□□□□□ -0.25
PPHLN1-223	ENST00000610488	KCNK9	Q9NPC2	374 aa		13.52	□□□□□ -0.25
PPHLN1-223	ENST00000610488	DYRK4	Q9NR20	520 aa		13.52	□□□□□ -0.25
PPHLN1-223	ENST00000610488	SENP1	Q9P0U3	644 aa		13.52	□□□□□ -0.25
PPHLN1-223	ENST00000610488	ZNF180	Q9UJW8	692 aa		13.52	□□□□□ -0.25
PPHLN1-223	ENST00000610488	ACTL7B	Q9Y614	415 aa		13.52	□□□□□ -0.25
PPHLN1-223	ENST00000610488	TRPM6	Q9BX84	2022 aa		13.51	□□□□□ -0.25
PPHLN1-223	ENST00000610488		A0A1W2PPM1	405 aa		13.51	□□□□□ -0.25
PPHLN1-223	ENST00000610488	HEATR9	A2RTY3	570 aa		13.51	□□□□□ -0.25
PPHLN1-223	ENST00000610488	YKT6	O15498	198 aa		13.51	□□□□□ -0.25
PPHLN1-223	ENST00000610488	LAT	O43561	262 aa		13.51	□□□□□ -0.25
PPHLN1-223	ENST00000610488	LDOC1	O95751	146 aa	Predicted RBP	13.51	□□□□□ -0.25
PPHLN1-223	ENST00000610488	EPO	P01588	193 aa		13.51	□□□□□ -0.25
PPHLN1-223	ENST00000610488	FGF1	P05230	155 aa		13.51	□□□□□ -0.25
PPHLN1-223	ENST00000610488	EPHA8	P29322	1005 aa	Predicted RBP	13.51	□□□□□ -0.25
PPHLN1-223	ENST00000610488	MDH1	P40925	334 aa	Known RBP	13.51	□□□□□ -0.25
PPHLN1-223	ENST00000610488	VASP	P50552	380 aa	Predicted RBP	13.51	□□□□□ -0.25
PPHLN1-223	ENST00000610488	GUCY1A3	Q02108	690 aa		13.51	□□□□□ -0.25
PPHLN1-223	ENST00000610488	NSUN2	Q08J23	767 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
PPHLN1-223	ENST00000610488	DNAJC3	Q13217	504 aa		13.51	□□□□□ -0.25
PPHLN1-223	ENST00000610488	SETMAR	Q53H47	684 aa	Predicted RBP	13.51	□□□□□ -0.25
PPHLN1-223	ENST00000610488	LGSN	Q5TDP6	509 aa		13.51	□□□□□ -0.25
PPHLN1-223	ENST00000610488	ZNF449	Q6P9G9	518 aa		13.51	□□□□□ -0.25
PPHLN1-223	ENST00000610488	OXR1	Q8N573	874 aa		13.51	□□□□□ -0.25
PPHLN1-223	ENST00000610488	GRIN3A	Q8TCU5	1115 aa		13.51	□□□□□ -0.25
PPHLN1-223	ENST00000610488	SAP25	Q8TEE9	199 aa		13.51	□□□□□ -0.25
PPHLN1-223	ENST00000610488	MZB1	Q8WU39	189 aa		13.51	□□□□□ -0.25
PPHLN1-223	ENST00000610488	KLK6	Q92876	244 aa		13.51	□□□□□ -0.25
PPHLN1-223	ENST00000610488	RANBP9	Q96S59	729 aa		13.51	□□□□□ -0.25
PPHLN1-223	ENST00000610488	TNKS2	Q9H2K2	1166 aa		13.51	□□□□□ -0.25
PPHLN1-223	ENST00000610488	C20orf96	Q9NUD7	363 aa	Predicted RBP	13.51	□□□□□ -0.25
PPHLN1-223	ENST00000610488	ZFAT	Q9P243	1243 aa		13.51	□□□□□ -0.25
PPHLN1-223	ENST00000610488	SLC17A6	Q9P2U8	582 aa		13.51	□□□□□ -0.25
PPHLN1-223	ENST00000610488	PPM1H	Q9ULR3	514 aa		13.51	□□□□□ -0.25
PPHLN1-223	ENST00000610488	CHKB	Q9Y259	395 aa		13.51	□□□□□ -0.25
PPHLN1-223	ENST00000610488	CA5B	Q9Y2D0	317 aa		13.51	□□□□□ -0.25
PPHLN1-223	ENST00000610488	ITPR1	Q14643	2758 aa		13.51	□□□□□ -0.25
PPHLN1-223	ENST00000610488	TMEM120B	A0PK00	339 aa		13.5	□□□□□ -0.25
PPHLN1-223	ENST00000610488	SMAD6	O43541	496 aa	Known RBP	13.5	□□□□□ -0.25
PPHLN1-223	ENST00000610488	RNGTT	O60942	597 aa	Known RBP	13.5	□□□□□ -0.25
PPHLN1-223	ENST00000610488	DKK1	O94907	266 aa		13.5	□□□□□ -0.25
PPHLN1-223	ENST00000610488	NDST3	O95803	873 aa		13.5	□□□□□ -0.25
PPHLN1-223	ENST00000610488	CAPNS1	P04632	268 aa		13.5	□□□□□ -0.25
PPHLN1-223	ENST00000610488	CTSL	P07711	333 aa		13.5	□□□□□ -0.25
PPHLN1-223	ENST00000610488	CHN1	P15882	459 aa		13.5	□□□□□ -0.25
PPHLN1-223	ENST00000610488	SERPINB9	P50453	376 aa		13.5	□□□□□ -0.25
PPHLN1-223	ENST00000610488	CLDN6	P56747	220 aa		13.5	□□□□□ -0.25
PPHLN1-223	ENST00000610488	GNGT1	P63211	74 aa		13.5	□□□□□ -0.25
PPHLN1-223	ENST00000610488	SLC20A2	Q08357	652 aa		13.5	□□□□□ -0.25
PPHLN1-223	ENST00000610488	BNIP3	Q12983	259 aa		13.5	□□□□□ -0.25
PPHLN1-223	ENST00000610488	TERF2	Q15554	542 aa		13.5	□□□□□ -0.25
PPHLN1-223	ENST00000610488	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	13.5	□□□□□ -0.25
PPHLN1-223	ENST00000610488	ARMC3	Q5W041	872 aa		13.5	□□□□□ -0.25
PPHLN1-223	ENST00000610488	ESRP1	Q6NXG1	681 aa	Known RBP	13.5	□□□□□ -0.25
PPHLN1-223	ENST00000610488	SRL	Q86TD4	932 aa		13.5	□□□□□ -0.25
PPHLN1-223	ENST00000610488	KCNMB4	Q86W47	210 aa		13.5	□□□□□ -0.25
PPHLN1-223	ENST00000610488	TRIM69	Q86WT6	500 aa		13.5	□□□□□ -0.25
PPHLN1-223	ENST00000610488	C4orf33	Q8N1A6	199 aa		13.5	□□□□□ -0.25
PPHLN1-223	ENST00000610488	MFSD2A	Q8NA29	543 aa		13.5	□□□□□ -0.25
PPHLN1-223	ENST00000610488	TRIB3	Q96RU7	358 aa		13.5	□□□□□ -0.25
PPHLN1-223	ENST00000610488	SMC6	Q96SB8	1091 aa		13.5	□□□□□ -0.25
PPHLN1-223	ENST00000610488	TDRD1	Q9BXT4	1180 aa	Known RBP	13.5	□□□□□ -0.25
PPHLN1-223	ENST00000610488	TM6SF2	Q9BZW4	377 aa		13.5	□□□□□ -0.25
PPHLN1-223	ENST00000610488	PREB	Q9HCU5	417 aa		13.5	□□□□□ -0.25
PPHLN1-223	ENST00000610488	PSD3	Q9NYI0	1048 aa		13.5	□□□□□ -0.25
PPHLN1-223	ENST00000610488	DMTF1	Q9Y222	760 aa		13.5	□□□□□ -0.25
PPHLN1-223	ENST00000610488	HS3ST2	Q9Y278	367 aa		13.5	□□□□□ -0.25
PPHLN1-223	ENST00000610488	RAX	Q9Y2V3	346 aa		13.5	□□□□□ -0.25
PPHLN1-223	ENST00000610488	RAI2	Q9Y5P3	530 aa		13.5	□□□□□ -0.25
PPHLN1-223	ENST00000610488	C10orf142	B7Z368	130 aa		13.49	□□□□□ -0.25
PPHLN1-223	ENST00000610488	TRIM49D1	C9J1S8	452 aa		13.49	□□□□□ -0.25
PPHLN1-223	ENST00000610488	SDC3	O75056	442 aa		13.49	□□□□□ -0.25
PPHLN1-223	ENST00000610488	SPAG7	O75391	227 aa		13.49	□□□□□ -0.25
PPHLN1-223	ENST00000610488	RFPL3	O75679	317 aa		13.49	□□□□□ -0.25
PPHLN1-223	ENST00000610488	KRT38	O76015	456 aa		13.49	□□□□□ -0.25
PPHLN1-223	ENST00000610488	MT-ND3	P03897	115 aa		13.49	□□□□□ -0.25
PPHLN1-223	ENST00000610488	SNRPA	P09012	282 aa	Known RBP	13.49	□□□□□ -0.25
PPHLN1-223	ENST00000610488	PAM	P19021	973 aa		13.49	□□□□□ -0.25
PPHLN1-223	ENST00000610488	RECQL	P46063	649 aa	Predicted RBP	13.49	□□□□□ -0.25
PPHLN1-223	ENST00000610488	MSLN	Q13421	630 aa	Predicted RBP	13.49	□□□□□ -0.25
PPHLN1-223	ENST00000610488	HSP90AA5P	Q58FG0	334 aa		13.49	□□□□□ -0.25
PPHLN1-223	ENST00000610488	RALGPS1	Q5JS13	557 aa		13.49	□□□□□ -0.25
PPHLN1-223	ENST00000610488	PIP5KL1	Q5T9C9	394 aa		13.49	□□□□□ -0.25
PPHLN1-223	ENST00000610488	PDPK2P	Q6A1A2	396 aa		13.49	□□□□□ -0.25
PPHLN1-223	ENST00000610488	C22orf39	Q6P5X5	142 aa		13.49	□□□□□ -0.25
PPHLN1-223	ENST00000610488	PACS1	Q6VY07	963 aa		13.49	□□□□□ -0.25
PPHLN1-223	ENST00000610488	SPATS2	Q86XZ4	545 aa	Known RBP	13.49	□□□□□ -0.25
PPHLN1-223	ENST00000610488	ANKRD42	Q8N9B4	389 aa		13.49	□□□□□ -0.25
PPHLN1-223	ENST00000610488	CHST14	Q8NCH0	376 aa		13.49	□□□□□ -0.25
PPHLN1-223	ENST00000610488	FAM131C	Q96AQ9	280 aa		13.49	□□□□□ -0.25
PPHLN1-223	ENST00000610488	ARRDC3	Q96B67	414 aa		13.49	□□□□□ -0.25
PPHLN1-223	ENST00000610488	FZD3	Q9NPG1	666 aa		13.49	□□□□□ -0.25
PPHLN1-223	ENST00000610488	IARS2	Q9NSE4	1012 aa	Known RBP	13.49	□□□□□ -0.25
PPHLN1-223	ENST00000610488	TXNDC16	Q9P2K2	825 aa		13.49	□□□□□ -0.25
PPHLN1-223	ENST00000610488	SLC2A6	Q9UGQ3	507 aa		13.49	□□□□□ -0.25
PPHLN1-223	ENST00000610488	IL36A	Q9UHA7	158 aa		13.49	□□□□□ -0.25
PPHLN1-223	ENST00000610488	PCDHGC4	Q9Y5F7	938 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 58 ms