RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 MYRFLQ96LU7 910 aa20.28■□□□□ 0.84
SSBP3-216ENST00000610401 HGH1Q9BTY7 390 aa20.28■□□□□ 0.84
SSBP3-216ENST00000610401 FAM124BQ9H5Z6 455 aaPredicted RBP20.28■□□□□ 0.84
SSBP3-216ENST00000610401 SUN2Q9UH99 717 aa20.28■□□□□ 0.84
SSBP3-216ENST00000610401 INVSQ9Y283 1065 aa20.28■□□□□ 0.84
SSBP3-216ENST00000610401 SLC27A5Q9Y2P5 690 aa20.28■□□□□ 0.84
SSBP3-216ENST00000610401 SQORQ9Y6N5 450 aa20.28■□□□□ 0.84
SSBP3-216ENST00000610401 KANSL1LA0AUZ9 987 aa20.28■□□□□ 0.84
SSBP3-216ENST00000610401 CYBBP04839 570 aa20.28■□□□□ 0.84
SSBP3-216ENST00000610401 MYF6P23409 242 aa20.28■□□□□ 0.84
SSBP3-216ENST00000610401 CAPGP40121 348 aa20.28■□□□□ 0.84
SSBP3-216ENST00000610401 MLLT10P55197 1068 aa20.28■□□□□ 0.84
SSBP3-216ENST00000610401 SCD5Q86SK9 330 aa20.28■□□□□ 0.84
SSBP3-216ENST00000610401 SIDT2Q8NBJ9 832 aaKnown RBP20.28■□□□□ 0.84
SSBP3-216ENST00000610401 OR2T11Q8NH01 316 aa20.28■□□□□ 0.84
SSBP3-216ENST00000610401 TBC1D15Q8TC07 691 aa20.28■□□□□ 0.84
SSBP3-216ENST00000610401 IGSF8Q969P0 613 aa20.28■□□□□ 0.84
SSBP3-216ENST00000610401 CDH9Q9ULB4 789 aa20.28■□□□□ 0.84
SSBP3-216ENST00000610401 PADI4Q9UM07 663 aa20.28■□□□□ 0.84
SSBP3-216ENST00000610401 MOXD2PA6NHM9 499 aa20.27■□□□□ 0.84
SSBP3-216ENST00000610401 AP3B1O00203 1094 aa20.27■□□□□ 0.84
SSBP3-216ENST00000610401 NIPSNAP2O75323 286 aa20.27■□□□□ 0.84
SSBP3-216ENST00000610401 FUCA1P04066 466 aa20.27■□□□□ 0.84
SSBP3-216ENST00000610401 CYP4B1P13584 511 aa20.27■□□□□ 0.84
SSBP3-216ENST00000610401 AGXTP21549 392 aa20.27■□□□□ 0.84
SSBP3-216ENST00000610401 GSSP48637 474 aa20.27■□□□□ 0.84
SSBP3-216ENST00000610401 ATP6V0D1P61421 351 aa20.27■□□□□ 0.84
SSBP3-216ENST00000610401 EGFLAMQ63HQ2 1017 aa20.27■□□□□ 0.84
SSBP3-216ENST00000610401 CXCL17Q6UXB2 119 aa20.27■□□□□ 0.84
SSBP3-216ENST00000610401 CENPSQ8N2Z9 138 aa20.27■□□□□ 0.84
SSBP3-216ENST00000610401 GABPB2Q8TAK5 448 aaPredicted RBP20.27■□□□□ 0.84
SSBP3-216ENST00000610401 TANKQ92844 425 aa20.27■□□□□ 0.84
SSBP3-216ENST00000610401 TMEM125Q96AQ2 219 aa20.27■□□□□ 0.84
SSBP3-216ENST00000610401 MTFMTQ96DP5 389 aaKnown RBP20.27■□□□□ 0.84
SSBP3-216ENST00000610401 SLC25A51Q9H1U9 297 aa20.27■□□□□ 0.84
SSBP3-216ENST00000610401 ADARB2Q9NS39 739 aaKnown RBP20.27■□□□□ 0.84
SSBP3-216ENST00000610401 ARMC1Q9NVT9 282 aa20.27■□□□□ 0.84
SSBP3-216ENST00000610401 CD274Q9NZQ7 290 aa20.27■□□□□ 0.84
SSBP3-216ENST00000610401 ACTR3BQ9P1U1 418 aa20.27■□□□□ 0.84
SSBP3-216ENST00000610401 ECI2O75521 394 aa20.27■□□□□ 0.84
SSBP3-216ENST00000610401 ZNF37AP17032 561 aaPredicted RBP20.27■□□□□ 0.84
SSBP3-216ENST00000610401 IL12AP29459 219 aa20.27■□□□□ 0.84
SSBP3-216ENST00000610401 RENBPP51606 427 aa20.27■□□□□ 0.84
SSBP3-216ENST00000610401 AIF1P55008 147 aa20.27■□□□□ 0.84
SSBP3-216ENST00000610401 DGCR6Q14129 220 aa20.27■□□□□ 0.84
SSBP3-216ENST00000610401 AGMOQ6ZNB7 445 aa20.27■□□□□ 0.84
SSBP3-216ENST00000610401 RTL3Q8N8U3 475 aaKnown RBP20.27■□□□□ 0.84
SSBP3-216ENST00000610401 THUMPD3Q9BV44 507 aaKnown RBP20.27■□□□□ 0.84
SSBP3-216ENST00000610401 PRKD2Q9BZL6 878 aa20.27■□□□□ 0.84
SSBP3-216ENST00000610401 ZFP14Q9HCL3 533 aa20.27■□□□□ 0.84
SSBP3-216ENST00000610401 FLRT1Q9NZU1 646 aa20.27■□□□□ 0.84
SSBP3-216ENST00000610401 COQ6Q9Y2Z9 468 aa20.27■□□□□ 0.84
SSBP3-216ENST00000610401 OAS3Q9Y6K5 1087 aaKnown RBP20.27■□□□□ 0.84
SSBP3-216ENST00000610401 SNX2O60749 519 aa20.26■□□□□ 0.83
SSBP3-216ENST00000610401 HTR6P50406 440 aa20.26■□□□□ 0.83
SSBP3-216ENST00000610401 TGFBIQ15582 683 aa20.26■□□□□ 0.83
SSBP3-216ENST00000610401 SYVN1Q86TM6 617 aa20.26■□□□□ 0.83
SSBP3-216ENST00000610401 METTL23Q86XA0 190 aa20.26■□□□□ 0.83
SSBP3-216ENST00000610401 GLT1D1Q96MS3 346 aa20.26■□□□□ 0.83
SSBP3-216ENST00000610401 SARDHQ9UL12 918 aa20.26■□□□□ 0.83
SSBP3-216ENST00000610401 DOCK3Q8IZD9 2030 aa20.26■□□□□ 0.83
SSBP3-216ENST00000610401 A0A0D9SEW6 157 aa20.26■□□□□ 0.83
SSBP3-216ENST00000610401 C17orf102A2RUQ5 167 aa20.26■□□□□ 0.83
SSBP3-216ENST00000610401 OR1E1P30953 314 aa20.26■□□□□ 0.83
SSBP3-216ENST00000610401 RFC2P35250 354 aa20.26■□□□□ 0.83
SSBP3-216ENST00000610401 PTPRNQ16849 979 aa20.26■□□□□ 0.83
SSBP3-216ENST00000610401 GALNT5Q7Z7M9 940 aa20.26■□□□□ 0.83
SSBP3-216ENST00000610401 TMCO5AQ8N6Q1 288 aa20.26■□□□□ 0.83
SSBP3-216ENST00000610401 TNIP2Q8NFZ5 429 aa20.26■□□□□ 0.83
SSBP3-216ENST00000610401 OR4K2Q8NGD2 314 aa20.26■□□□□ 0.83
SSBP3-216ENST00000610401 TMBIM1Q969X1 311 aa20.26■□□□□ 0.83
SSBP3-216ENST00000610401 ROPN1LQ96C74 230 aa20.26■□□□□ 0.83
SSBP3-216ENST00000610401 TSGA13Q96PP4 275 aa20.26■□□□□ 0.83
SSBP3-216ENST00000610401 HOPXQ9BPY8 73 aaPredicted RBP20.26■□□□□ 0.83
SSBP3-216ENST00000610401 GPATCH1Q9BRR8 931 aaKnown RBP20.26■□□□□ 0.83
SSBP3-216ENST00000610401 C17orf80Q9BSJ5 609 aa20.26■□□□□ 0.83
SSBP3-216ENST00000610401 VPS45Q9NRW7 570 aa20.26■□□□□ 0.83
SSBP3-216ENST00000610401 MYLKQ15746 1914 aa20.26■□□□□ 0.83
SSBP3-216ENST00000610401 A8MX80 341 aa20.26■□□□□ 0.83
SSBP3-216ENST00000610401 LDB2O43679 373 aa20.26■□□□□ 0.83
SSBP3-216ENST00000610401 SLC22A3O75751 556 aa20.26■□□□□ 0.83
SSBP3-216ENST00000610401 CAPNS1P04632 268 aa20.26■□□□□ 0.83
SSBP3-216ENST00000610401 TUBA4AP68366 448 aa20.26■□□□□ 0.83
SSBP3-216ENST00000610401 ZNF235Q14590 738 aa20.26■□□□□ 0.83
SSBP3-216ENST00000610401 ATP6AP1Q15904 470 aa20.26■□□□□ 0.83
SSBP3-216ENST00000610401 TMTC4Q5T4D3 741 aa20.26■□□□□ 0.83
SSBP3-216ENST00000610401 CCDC81Q6ZN84 652 aa20.26■□□□□ 0.83
SSBP3-216ENST00000610401 DCP1BQ8IZD4 617 aaKnown RBP20.26■□□□□ 0.83
SSBP3-216ENST00000610401 ATAD1Q8NBU5 361 aa20.26■□□□□ 0.83
SSBP3-216ENST00000610401 BEGAINQ9BUH8 593 aa20.26■□□□□ 0.83
SSBP3-216ENST00000610401 SEZ6LQ9BYH1 1024 aa20.26■□□□□ 0.83
SSBP3-216ENST00000610401 LHPPQ9H008 270 aa20.26■□□□□ 0.83
SSBP3-216ENST00000610401 SH3GLB1Q9Y371 365 aa20.26■□□□□ 0.83
SSBP3-216ENST00000610401 MYADML2A6NDP7 307 aa20.25■□□□□ 0.83
SSBP3-216ENST00000610401 AXIN1O15169 862 aa20.25■□□□□ 0.83
SSBP3-216ENST00000610401 BCL10O95999 233 aa20.25■□□□□ 0.83
SSBP3-216ENST00000610401 F2P00734 622 aa20.25■□□□□ 0.83
SSBP3-216ENST00000610401 MMP2P08253 660 aa20.25■□□□□ 0.83
SSBP3-216ENST00000610401 CD52P31358 61 aa20.25■□□□□ 0.83
SSBP3-216ENST00000610401 ANKRD26P1Q6NSI1 321 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms