RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 RGS2P41220 211 aa4.2□□□□□ -1.74
HDDC2-207ENST00000608532 UBA7P41226 1012 aa4.2□□□□□ -1.74
HDDC2-207ENST00000608532 APOBEC1P41238 236 aaKnown RBP4.2□□□□□ -1.74
HDDC2-207ENST00000608532 CCR9P51686 369 aa4.2□□□□□ -1.74
HDDC2-207ENST00000608532 GOLGA8DPQ0D2H9 430 aa4.2□□□□□ -1.74
HDDC2-207ENST00000608532 PDE1CQ14123 709 aaPredicted RBP4.2□□□□□ -1.74
HDDC2-207ENST00000608532 ZNF704Q6ZNC4 412 aaPredicted RBP4.2□□□□□ -1.74
HDDC2-207ENST00000608532 DGLUCYQ7Z3D6 616 aa4.2□□□□□ -1.74
HDDC2-207ENST00000608532 CPLX4Q7Z7G2 160 aa4.2□□□□□ -1.74
HDDC2-207ENST00000608532 THAP6Q8TBB0 222 aa4.2□□□□□ -1.74
HDDC2-207ENST00000608532 UTP15Q8TED0 518 aaKnown RBP4.2□□□□□ -1.74
HDDC2-207ENST00000608532 TMEM255BQ8WV15 326 aa4.2□□□□□ -1.74
HDDC2-207ENST00000608532 DNAAF4Q8WXU2 420 aa4.2□□□□□ -1.74
HDDC2-207ENST00000608532 ST6GAL2Q96JF0 529 aa4.2□□□□□ -1.74
HDDC2-207ENST00000608532 STRA6Q9BX79 667 aa4.2□□□□□ -1.74
HDDC2-207ENST00000608532 LTB4R2Q9NPC1 389 aa4.2□□□□□ -1.74
HDDC2-207ENST00000608532 TCP11L1Q9NUJ3 509 aa4.2□□□□□ -1.74
HDDC2-207ENST00000608532 DDX43Q9NXZ2 648 aaKnown RBP4.2□□□□□ -1.74
HDDC2-207ENST00000608532 MARCH4Q9P2E8 410 aaPredicted RBP4.2□□□□□ -1.74
HDDC2-207ENST00000608532 COPG2Q9UBF2 871 aa4.2□□□□□ -1.74
HDDC2-207ENST00000608532 STK39Q9UEW8 545 aa4.2□□□□□ -1.74
HDDC2-207ENST00000608532 POLG2Q9UHN1 485 aa4.2□□□□□ -1.74
HDDC2-207ENST00000608532 IGLV5-45A0A087WSX0 123 aa4.19□□□□□ -1.74
HDDC2-207ENST00000608532 ZCWPW2A0A1B0GU75 182 aa4.19□□□□□ -1.74
HDDC2-207ENST00000608532 EIF4E1BA6NMX2 242 aaKnown RBP4.19□□□□□ -1.74
HDDC2-207ENST00000608532 FAM90A26D6RGX4 464 aa4.19□□□□□ -1.74
HDDC2-207ENST00000608532 KCNN4O15554 427 aa4.19□□□□□ -1.74
HDDC2-207ENST00000608532 NR2F2P24468 414 aa4.19□□□□□ -1.74
HDDC2-207ENST00000608532 ATP12AP54707 1039 aa4.19□□□□□ -1.74
HDDC2-207ENST00000608532 CSTF3Q12996 717 aaKnown RBP4.19□□□□□ -1.74
HDDC2-207ENST00000608532 G3BP1Q13283 466 aaKnown RBP eCLIP4.19□□□□□ -1.74
HDDC2-207ENST00000608532 TBCEQ15813 527 aaPredicted RBP4.19□□□□□ -1.74
HDDC2-207ENST00000608532 PNLIPRP3Q17RR3 467 aa4.19□□□□□ -1.74
HDDC2-207ENST00000608532 SDCCAG8Q86SQ7 713 aaPredicted RBP4.19□□□□□ -1.74
HDDC2-207ENST00000608532 CNBD1Q8NA66 436 aa4.19□□□□□ -1.74
HDDC2-207ENST00000608532 TMEM116Q8NCL8 245 aa4.19□□□□□ -1.74
HDDC2-207ENST00000608532 OR1J2Q8NGS2 313 aa4.19□□□□□ -1.74
HDDC2-207ENST00000608532 ETNPPLQ8TBG4 499 aa4.19□□□□□ -1.74
HDDC2-207ENST00000608532 ARHGEF26Q96DR7 871 aa4.19□□□□□ -1.74
HDDC2-207ENST00000608532 STAMBPL1Q96FJ0 436 aa4.19□□□□□ -1.74
HDDC2-207ENST00000608532 WDFY2Q96P53 400 aa4.19□□□□□ -1.74
HDDC2-207ENST00000608532 PIGMQ9H3S5 423 aa4.19□□□□□ -1.74
HDDC2-207ENST00000608532 POLR1BQ9H9Y6 1135 aa4.19□□□□□ -1.74
HDDC2-207ENST00000608532 HCFC1R1Q9NWW0 138 aa4.19□□□□□ -1.74
HDDC2-207ENST00000608532 LIMA1Q9UHB6 759 aaKnown RBP4.19□□□□□ -1.74
HDDC2-207ENST00000608532 CLIC4Q9Y696 253 aa4.19□□□□□ -1.74
HDDC2-207ENST00000608532 FAM237BA0A1B0GVD1 139 aa4.18□□□□□ -1.74
HDDC2-207ENST00000608532 OR5K3A6NET4 321 aa4.18□□□□□ -1.74
HDDC2-207ENST00000608532 PMS2P5A8MQ11 134 aa4.18□□□□□ -1.74
HDDC2-207ENST00000608532 TMEM178BH3BS89 294 aa4.18□□□□□ -1.74
HDDC2-207ENST00000608532 ATP2A1O14983 1001 aa4.18□□□□□ -1.74
HDDC2-207ENST00000608532 SYNGR3O43761 229 aa4.18□□□□□ -1.74
HDDC2-207ENST00000608532 CAVIN2O95810 425 aa4.18□□□□□ -1.74
HDDC2-207ENST00000608532 IGHV4-39P01824 125 aa4.18□□□□□ -1.74
HDDC2-207ENST00000608532 PRCPP42785 496 aa4.18□□□□□ -1.74
HDDC2-207ENST00000608532 ARCN1P48444 511 aaKnown RBP4.18□□□□□ -1.74
HDDC2-207ENST00000608532 MMP14P50281 582 aa4.18□□□□□ -1.74
HDDC2-207ENST00000608532 RPL24P83731 157 aaKnown RBP4.18□□□□□ -1.74
HDDC2-207ENST00000608532 TSTQ16762 297 aaKnown RBP4.18□□□□□ -1.74
HDDC2-207ENST00000608532 KRTCAP3Q53RY4 240 aa4.18□□□□□ -1.74
HDDC2-207ENST00000608532 PAPD4Q6PIY7 484 aaKnown RBP4.18□□□□□ -1.74
HDDC2-207ENST00000608532 CYP20A1Q6UW02 462 aa4.18□□□□□ -1.74
HDDC2-207ENST00000608532 CEACAM20Q6UY09 585 aa4.18□□□□□ -1.74
HDDC2-207ENST00000608532 FRMD1Q8N878 549 aa4.18□□□□□ -1.74
HDDC2-207ENST00000608532 OR10V1Q8NGI7 309 aa4.18□□□□□ -1.74
HDDC2-207ENST00000608532 HM13Q8TCT9 377 aa4.18□□□□□ -1.74
HDDC2-207ENST00000608532 ZKSCAN4Q969J2 545 aaPredicted RBP4.18□□□□□ -1.74
HDDC2-207ENST00000608532 PHF21AQ96BD5 680 aa4.18□□□□□ -1.74
HDDC2-207ENST00000608532 ZNF501Q96CX3 271 aaPredicted RBP4.18□□□□□ -1.74
HDDC2-207ENST00000608532 PERPQ96FX8 193 aa4.18□□□□□ -1.74
HDDC2-207ENST00000608532 MAP7D2Q96T17 732 aa4.18□□□□□ -1.74
HDDC2-207ENST00000608532 SEMA3CQ99985 751 aa4.18□□□□□ -1.74
HDDC2-207ENST00000608532 SLC26A6Q9BXS9 759 aa4.18□□□□□ -1.74
HDDC2-207ENST00000608532 SIL1Q9H173 461 aa4.18□□□□□ -1.74
HDDC2-207ENST00000608532 TFB2MQ9H5Q4 396 aaKnown RBP4.18□□□□□ -1.74
HDDC2-207ENST00000608532 ZNF696Q9H7X3 374 aa4.18□□□□□ -1.74
HDDC2-207ENST00000608532 IRAK4Q9NWZ3 460 aa4.18□□□□□ -1.74
HDDC2-207ENST00000608532 KCNE2Q9Y6J6 123 aa4.18□□□□□ -1.74
HDDC2-207ENST00000608532 GREB1LQ9C091 1923 aaPredicted RBP4.18□□□□□ -1.74
HDDC2-207ENST00000608532 A0A1B0GVC2 190 aa4.17□□□□□ -1.74
HDDC2-207ENST00000608532 RTN3O95197 1032 aaPredicted RBP4.17□□□□□ -1.74
HDDC2-207ENST00000608532 APOHP02749 345 aaPredicted RBP4.17□□□□□ -1.74
HDDC2-207ENST00000608532 KRT19P08727 400 aa4.17□□□□□ -1.74
HDDC2-207ENST00000608532 NR1D1P20393 614 aa4.17□□□□□ -1.74
HDDC2-207ENST00000608532 UGT1A1P22309 533 aa4.17□□□□□ -1.74
HDDC2-207ENST00000608532 KRT9P35527 623 aa4.17□□□□□ -1.74
HDDC2-207ENST00000608532 AHRP35869 848 aa4.17□□□□□ -1.74
HDDC2-207ENST00000608532 RPS3AP61247 264 aaKnown RBP4.17□□□□□ -1.74
HDDC2-207ENST00000608532 RUNX1T1Q06455 604 aa4.17□□□□□ -1.74
HDDC2-207ENST00000608532 GAGE5Q13069 117 aa4.17□□□□□ -1.74
HDDC2-207ENST00000608532 GAGE6Q13070 117 aa4.17□□□□□ -1.74
HDDC2-207ENST00000608532 NAB2Q15742 525 aa4.17□□□□□ -1.74
HDDC2-207ENST00000608532 ZNF805Q5CZA5 627 aa4.17□□□□□ -1.74
HDDC2-207ENST00000608532 KRTAP5-11Q6L8G4 156 aa4.17□□□□□ -1.74
HDDC2-207ENST00000608532 FBXL22Q6P050 247 aa4.17□□□□□ -1.74
HDDC2-207ENST00000608532 MMS22LQ6ZRQ5 1243 aa4.17□□□□□ -1.74
HDDC2-207ENST00000608532 PLEKHM3Q6ZWE6 761 aa4.17□□□□□ -1.74
HDDC2-207ENST00000608532 KLHDC9Q8NEP7 349 aa4.17□□□□□ -1.74
HDDC2-207ENST00000608532 WBP2Q969T9 261 aa4.17□□□□□ -1.74
HDDC2-207ENST00000608532 OXNAD1Q96HP4 312 aaPredicted RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms