RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 ZNF677Q86XU0 584 aa11.63□□□□□ -0.55
PDLIM1P1-201ENST00000604187 C3orf20Q8ND61 904 aa11.63□□□□□ -0.55
PDLIM1P1-201ENST00000604187 MCEEQ96PE7 176 aa11.63□□□□□ -0.55
PDLIM1P1-201ENST00000604187 SMIM14Q96QK8 99 aa11.63□□□□□ -0.55
PDLIM1P1-201ENST00000604187 RIOK2Q9BVS4 552 aaKnown RBP11.63□□□□□ -0.55
PDLIM1P1-201ENST00000604187 STK33Q9BYT3 514 aa11.63□□□□□ -0.55
PDLIM1P1-201ENST00000604187 ADAM22Q9P0K1 906 aa11.63□□□□□ -0.55
PDLIM1P1-201ENST00000604187 PHTF1Q9UMS5 762 aa11.63□□□□□ -0.55
PDLIM1P1-201ENST00000604187 HIVEP1P15822 2718 aa11.63□□□□□ -0.55
PDLIM1P1-201ENST00000604187 CCDC168Q8NDH2 2452 aa11.63□□□□□ -0.55
PDLIM1P1-201ENST00000604187 ANKRD36A6QL64 1941 aa11.62□□□□□ -0.55
PDLIM1P1-201ENST00000604187 ARHGAP10A1A4S6 786 aa11.62□□□□□ -0.55
PDLIM1P1-201ENST00000604187 ANKRD62A6NC57 917 aa11.62□□□□□ -0.55
PDLIM1P1-201ENST00000604187 DAPK3O43293 454 aa11.62□□□□□ -0.55
PDLIM1P1-201ENST00000604187 DNAJC6O75061 913 aa11.62□□□□□ -0.55
PDLIM1P1-201ENST00000604187 UBXN7O94888 489 aa11.62□□□□□ -0.55
PDLIM1P1-201ENST00000604187 PGLSO95336 258 aa11.62□□□□□ -0.55
PDLIM1P1-201ENST00000604187 PRKCSHP14314 528 aaPredicted RBP11.62□□□□□ -0.55
PDLIM1P1-201ENST00000604187 GRNP28799 593 aaKnown RBP11.62□□□□□ -0.55
PDLIM1P1-201ENST00000604187 PTPN4P29074 926 aa11.62□□□□□ -0.55
PDLIM1P1-201ENST00000604187 PTGIRP43119 386 aa11.62□□□□□ -0.55
PDLIM1P1-201ENST00000604187 GSCP56915 257 aaPredicted RBP11.62□□□□□ -0.55
PDLIM1P1-201ENST00000604187 NAA30Q147X3 362 aaPredicted RBP11.62□□□□□ -0.55
PDLIM1P1-201ENST00000604187 CA9Q16790 459 aa11.62□□□□□ -0.55
PDLIM1P1-201ENST00000604187 VWA3BQ502W6 1294 aa11.62□□□□□ -0.55
PDLIM1P1-201ENST00000604187 ZRANB3Q5FWF4 1079 aa11.62□□□□□ -0.55
PDLIM1P1-201ENST00000604187 MIIPQ5JXC2 388 aa11.62□□□□□ -0.55
PDLIM1P1-201ENST00000604187 DNAJC24Q6P3W2 148 aa11.62□□□□□ -0.55
PDLIM1P1-201ENST00000604187 FAM199XQ6PEV8 388 aaPredicted RBP11.62□□□□□ -0.55
PDLIM1P1-201ENST00000604187 RFX8Q6ZV50 586 aa11.62□□□□□ -0.55
PDLIM1P1-201ENST00000604187 ZNF765Q7L2R6 523 aa11.62□□□□□ -0.55
PDLIM1P1-201ENST00000604187 PRSS42Q7Z5A4 293 aa11.62□□□□□ -0.55
PDLIM1P1-201ENST00000604187 SYVN1Q86TM6 617 aa11.62□□□□□ -0.55
PDLIM1P1-201ENST00000604187 PHYKPLQ8IUZ5 450 aa11.62□□□□□ -0.55
PDLIM1P1-201ENST00000604187 PGBD5Q8N414 524 aa11.62□□□□□ -0.55
PDLIM1P1-201ENST00000604187 AVL9Q8NBF6 648 aa11.62□□□□□ -0.55
PDLIM1P1-201ENST00000604187 EXD1Q8NHP7 514 aa11.62□□□□□ -0.55
PDLIM1P1-201ENST00000604187 MARVELD3Q96A59 401 aa11.62□□□□□ -0.55
PDLIM1P1-201ENST00000604187 PNPLA2Q96AD5 504 aa11.62□□□□□ -0.55
PDLIM1P1-201ENST00000604187 COX14Q96I36 57 aa11.62□□□□□ -0.55
PDLIM1P1-201ENST00000604187 PLEKHG4BQ96PX9 1271 aa11.62□□□□□ -0.55
PDLIM1P1-201ENST00000604187 NUDCD1Q96RS6 583 aa11.62□□□□□ -0.55
PDLIM1P1-201ENST00000604187 CNPY3Q9BT09 278 aa11.62□□□□□ -0.55
PDLIM1P1-201ENST00000604187 GPR87Q9BY21 358 aa11.62□□□□□ -0.55
PDLIM1P1-201ENST00000604187 DHX35Q9H5Z1 703 aaKnown RBP11.62□□□□□ -0.55
PDLIM1P1-201ENST00000604187 AKIRIN1Q9H9L7 192 aaPredicted RBP11.62□□□□□ -0.55
PDLIM1P1-201ENST00000604187 VPS18Q9P253 973 aa11.62□□□□□ -0.55
PDLIM1P1-201ENST00000604187 AP4E1Q9UPM8 1137 aa11.62□□□□□ -0.55
PDLIM1P1-201ENST00000604187 SLC30A1Q9Y6M5 507 aa11.62□□□□□ -0.55
PDLIM1P1-201ENST00000604187 ESPL1Q14674 2120 aa11.62□□□□□ -0.55
PDLIM1P1-201ENST00000604187 ARHGEF17Q96PE2 2063 aaPredicted RBP11.61□□□□□ -0.55
PDLIM1P1-201ENST00000604187 SIGLEC16A6NMB1 481 aa11.61□□□□□ -0.55
PDLIM1P1-201ENST00000604187 OR5K4A6NMS3 321 aa11.61□□□□□ -0.55
PDLIM1P1-201ENST00000604187 PES1O00541 588 aaKnown RBP11.61□□□□□ -0.55
PDLIM1P1-201ENST00000604187 CEACAM4O75871 244 aa11.61□□□□□ -0.55
PDLIM1P1-201ENST00000604187 CBX6O95503 412 aa11.61□□□□□ -0.55
PDLIM1P1-201ENST00000604187 PYGLP06737 847 aa11.61□□□□□ -0.55
PDLIM1P1-201ENST00000604187 AMD1P17707 334 aa11.61□□□□□ -0.55
PDLIM1P1-201ENST00000604187 ERCC2P18074 760 aa11.61□□□□□ -0.55
PDLIM1P1-201ENST00000604187 HSPA9P38646 679 aaKnown RBP11.61□□□□□ -0.55
PDLIM1P1-201ENST00000604187 CAPZBP47756 277 aa11.61□□□□□ -0.55
PDLIM1P1-201ENST00000604187 MAXP61244 160 aa11.61□□□□□ -0.55
PDLIM1P1-201ENST00000604187 RPS15P62841 145 aaKnown RBP11.61□□□□□ -0.55
PDLIM1P1-201ENST00000604187 TUBB3Q13509 450 aa11.61□□□□□ -0.55
PDLIM1P1-201ENST00000604187 TPD52L1Q16890 204 aaPredicted RBP11.61□□□□□ -0.55
PDLIM1P1-201ENST00000604187 ARMC12Q5T9G4 340 aa11.61□□□□□ -0.55
PDLIM1P1-201ENST00000604187 CACHD1Q5VU97 1274 aa11.61□□□□□ -0.55
PDLIM1P1-201ENST00000604187 PWWP2BQ6NUJ5 590 aa11.61□□□□□ -0.55
PDLIM1P1-201ENST00000604187 TRIM72Q6ZMU5 477 aa11.61□□□□□ -0.55
PDLIM1P1-201ENST00000604187 FAM92BQ6ZTR7 304 aa11.61□□□□□ -0.55
PDLIM1P1-201ENST00000604187 TRIM48Q8IWZ4 208 aa11.61□□□□□ -0.55
PDLIM1P1-201ENST00000604187 RHOT1Q8IXI2 618 aa11.61□□□□□ -0.55
PDLIM1P1-201ENST00000604187 SLC34A3Q8N130 599 aa11.61□□□□□ -0.55
PDLIM1P1-201ENST00000604187 RBMXL3Q8N7X1 1067 aaKnown RBP11.61□□□□□ -0.55
PDLIM1P1-201ENST00000604187 TTC13Q8NBP0 860 aa11.61□□□□□ -0.55
PDLIM1P1-201ENST00000604187 RSC1A1Q92681 617 aa11.61□□□□□ -0.55
PDLIM1P1-201ENST00000604187 SNRNP40Q96DI7 357 aaKnown RBP11.61□□□□□ -0.55
PDLIM1P1-201ENST00000604187 ZNF599Q96NL3 588 aa11.61□□□□□ -0.55
PDLIM1P1-201ENST00000604187 PCDHB18PQ96TA0 734 aa11.61□□□□□ -0.55
PDLIM1P1-201ENST00000604187 NUDT9Q9BW91 350 aa11.61□□□□□ -0.55
PDLIM1P1-201ENST00000604187 VPS16Q9H269 839 aa11.61□□□□□ -0.55
PDLIM1P1-201ENST00000604187 OSGEPL1Q9H4B0 414 aa11.61□□□□□ -0.55
PDLIM1P1-201ENST00000604187 UCK1Q9HA47 277 aa11.61□□□□□ -0.55
PDLIM1P1-201ENST00000604187 PDE7BQ9NP56 450 aa11.61□□□□□ -0.55
PDLIM1P1-201ENST00000604187 ASF1BQ9NVP2 202 aa11.61□□□□□ -0.55
PDLIM1P1-201ENST00000604187 SCHIP1Q9P0W5 487 aaPredicted RBP11.61□□□□□ -0.55
PDLIM1P1-201ENST00000604187 G3BP2Q9UN86 482 aaKnown RBP11.61□□□□□ -0.55
PDLIM1P1-201ENST00000604187 PCDHGB7Q9Y5F8 929 aa11.61□□□□□ -0.55
PDLIM1P1-201ENST00000604187 ANKUB1A6NFN9 424 aa11.6□□□□□ -0.55
PDLIM1P1-201ENST00000604187 A6NL46 340 aa11.6□□□□□ -0.55
PDLIM1P1-201ENST00000604187 HNRNPRO43390 633 aaKnown RBP11.6□□□□□ -0.55
PDLIM1P1-201ENST00000604187 CALB1P05937 261 aa11.6□□□□□ -0.55
PDLIM1P1-201ENST00000604187 UNGP13051 313 aaPredicted RBP11.6□□□□□ -0.55
PDLIM1P1-201ENST00000604187 RPL7AP62424 266 aaKnown RBP11.6□□□□□ -0.55
PDLIM1P1-201ENST00000604187 PTSQ03393 145 aa11.6□□□□□ -0.55
PDLIM1P1-201ENST00000604187 LAMB3Q13751 1172 aa11.6□□□□□ -0.55
PDLIM1P1-201ENST00000604187 KCNAB1Q14722 419 aa11.6□□□□□ -0.55
PDLIM1P1-201ENST00000604187 CLEC16AQ2KHT3 1053 aa11.6□□□□□ -0.55
PDLIM1P1-201ENST00000604187 HSP90AA4PQ58FG1 418 aa11.6□□□□□ -0.55
PDLIM1P1-201ENST00000604187 CYB5D1Q6P9G0 228 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms