RNA–Protein interactions for RNA: ENST00000600935.1

NUP62-222, Transcript of nucleoporin 62, human

TSL 4

Gene NUP62, Length 587 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-222	ENST00000600935	PAF1	Q8N7H5	531 aa		10.9	□□□□□ -0.66
NUP62-222	ENST00000600935	SEC14L1	Q92503	715 aa		10.9	□□□□□ -0.66
NUP62-222	ENST00000600935	RSC1A1	Q92681	617 aa		10.9	□□□□□ -0.66
NUP62-222	ENST00000600935	AP2M1	Q96CW1	435 aa		10.9	□□□□□ -0.66
NUP62-222	ENST00000600935	SCRN2	Q96FV2	425 aa		10.9	□□□□□ -0.66
NUP62-222	ENST00000600935	PLEKHG4B	Q96PX9	1271 aa		10.9	□□□□□ -0.66
NUP62-222	ENST00000600935	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	10.9	□□□□□ -0.66
NUP62-222	ENST00000600935	STN1	Q9H668	368 aa	Known RBP	10.9	□□□□□ -0.66
NUP62-222	ENST00000600935	UCK1	Q9HA47	277 aa		10.9	□□□□□ -0.66
NUP62-222	ENST00000600935	SCHIP1	Q9P0W5	487 aa	Predicted RBP	10.9	□□□□□ -0.66
NUP62-222	ENST00000600935	KIAA1468	Q9P260	1216 aa		10.9	□□□□□ -0.66
NUP62-222	ENST00000600935	CNOT8	Q9UFF9	292 aa	Known RBP	10.9	□□□□□ -0.66
NUP62-222	ENST00000600935	ZNHIT2	Q9UHR6	403 aa		10.9	□□□□□ -0.66
NUP62-222	ENST00000600935	PHTF1	Q9UMS5	762 aa		10.9	□□□□□ -0.66
NUP62-222	ENST00000600935	PPIL1	Q9Y3C6	166 aa		10.9	□□□□□ -0.66
NUP62-222	ENST00000600935	FBN3	Q75N90	2809 aa		10.9	□□□□□ -0.66
NUP62-222	ENST00000600935	PCNX1	Q96RV3	2341 aa		10.9	□□□□□ -0.67
NUP62-222	ENST00000600935	NAV3	Q8IVL0	2385 aa		10.89	□□□□□ -0.67
NUP62-222	ENST00000600935	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	10.89	□□□□□ -0.67
NUP62-222	ENST00000600935	TCRBV5S1A1T	A0A578	114 aa		10.89	□□□□□ -0.67
NUP62-222	ENST00000600935	SNX2	O60749	519 aa		10.89	□□□□□ -0.67
NUP62-222	ENST00000600935	UBXN7	O94888	489 aa		10.89	□□□□□ -0.67
NUP62-222	ENST00000600935	CYP2A6	P11509	494 aa	Predicted RBP	10.89	□□□□□ -0.67
NUP62-222	ENST00000600935	KRT3	P12035	628 aa		10.89	□□□□□ -0.67
NUP62-222	ENST00000600935	ACP5	P13686	325 aa		10.89	□□□□□ -0.67
NUP62-222	ENST00000600935	NELFE	P18615	380 aa	Known RBP	10.89	□□□□□ -0.67
NUP62-222	ENST00000600935	GPD1	P21695	349 aa		10.89	□□□□□ -0.67
NUP62-222	ENST00000600935	TPI1	P60174	286 aa		10.89	□□□□□ -0.67
NUP62-222	ENST00000600935	PTS	Q03393	145 aa		10.89	□□□□□ -0.67
NUP62-222	ENST00000600935	IL10RB	Q08334	325 aa		10.89	□□□□□ -0.67
NUP62-222	ENST00000600935	CA9	Q16790	459 aa		10.89	□□□□□ -0.67
NUP62-222	ENST00000600935	KLHDC7A	Q5VTJ3	777 aa		10.89	□□□□□ -0.67
NUP62-222	ENST00000600935	FAM69B	Q5VUD6	431 aa		10.89	□□□□□ -0.67
NUP62-222	ENST00000600935	LRRC66	Q68CR7	880 aa		10.89	□□□□□ -0.67
NUP62-222	ENST00000600935	SCYL2	Q6P3W7	929 aa		10.89	□□□□□ -0.67
NUP62-222	ENST00000600935	ZNF517	Q6ZMY9	492 aa	Predicted RBP	10.89	□□□□□ -0.67
NUP62-222	ENST00000600935	TMEM26	Q6ZUK4	368 aa		10.89	□□□□□ -0.67
NUP62-222	ENST00000600935	ZNF765	Q7L2R6	523 aa		10.89	□□□□□ -0.67
NUP62-222	ENST00000600935	NLRP8	Q86W28	1048 aa		10.89	□□□□□ -0.67
NUP62-222	ENST00000600935	HPS6	Q86YV9	775 aa		10.89	□□□□□ -0.67
NUP62-222	ENST00000600935	RHOT1	Q8IXI2	618 aa		10.89	□□□□□ -0.67
NUP62-222	ENST00000600935	CISD2	Q8N5K1	135 aa	Known RBP	10.89	□□□□□ -0.67
NUP62-222	ENST00000600935	LZTR1	Q8N653	840 aa		10.89	□□□□□ -0.67
NUP62-222	ENST00000600935	PIH1D2	Q8WWB5	315 aa		10.89	□□□□□ -0.67
NUP62-222	ENST00000600935	INPP5D	Q92835	1189 aa		10.89	□□□□□ -0.67
NUP62-222	ENST00000600935	WDR24	Q96S15	920 aa		10.89	□□□□□ -0.67
NUP62-222	ENST00000600935	SMAD5	Q99717	465 aa	Known RBP	10.89	□□□□□ -0.67
NUP62-222	ENST00000600935	NOD2	Q9HC29	1040 aa		10.89	□□□□□ -0.67
NUP62-222	ENST00000600935	GPATCH2L	Q9NWQ4	482 aa		10.89	□□□□□ -0.67
NUP62-222	ENST00000600935	VPS18	Q9P253	973 aa		10.89	□□□□□ -0.67
NUP62-222	ENST00000600935	NTNG1	Q9Y2I2	539 aa		10.89	□□□□□ -0.67
NUP62-222	ENST00000600935	PKDREJ	Q9NTG1	2253 aa		10.89	□□□□□ -0.67
NUP62-222	ENST00000600935	PIKFYVE	Q9Y2I7	2098 aa		10.88	□□□□□ -0.67
NUP62-222	ENST00000600935		A0A1W2PQ67	120 aa		10.88	□□□□□ -0.67
NUP62-222	ENST00000600935	SSU72P8	A0A1W2PR75	194 aa		10.88	□□□□□ -0.67
NUP62-222	ENST00000600935		F8VZ95	297 aa		10.88	□□□□□ -0.67
NUP62-222	ENST00000600935	RASSF9	O75901	435 aa		10.88	□□□□□ -0.67
NUP62-222	ENST00000600935	PGLS	O95336	258 aa		10.88	□□□□□ -0.67
NUP62-222	ENST00000600935	FGFR1OP	O95684	399 aa	Known RBP	10.88	□□□□□ -0.67
NUP62-222	ENST00000600935	UNG	P13051	313 aa	Predicted RBP	10.88	□□□□□ -0.67
NUP62-222	ENST00000600935	FOLR1	P15328	257 aa		10.88	□□□□□ -0.67
NUP62-222	ENST00000600935	CTPS1	P17812	591 aa		10.88	□□□□□ -0.67
NUP62-222	ENST00000600935	HNRNPH3	P31942	346 aa	Known RBP	10.88	□□□□□ -0.67
NUP62-222	ENST00000600935	HTR7	P34969	479 aa		10.88	□□□□□ -0.67
NUP62-222	ENST00000600935	SLC19A1	P41440	591 aa		10.88	□□□□□ -0.67
NUP62-222	ENST00000600935	CAPZB	P47756	277 aa		10.88	□□□□□ -0.67
NUP62-222	ENST00000600935	PPP1CA	P62136	330 aa		10.88	□□□□□ -0.67
NUP62-222	ENST00000600935	KCNAB1	Q14722	419 aa		10.88	□□□□□ -0.67
NUP62-222	ENST00000600935	LBR	Q14739	615 aa	Known RBP	10.88	□□□□□ -0.67
NUP62-222	ENST00000600935	MIIP	Q5JXC2	388 aa		10.88	□□□□□ -0.67
NUP62-222	ENST00000600935	TMCO4	Q5TGY1	634 aa		10.88	□□□□□ -0.67
NUP62-222	ENST00000600935	CREBRF	Q8IUR6	639 aa		10.88	□□□□□ -0.67
NUP62-222	ENST00000600935	IQCK	Q8N0W5	287 aa		10.88	□□□□□ -0.67
NUP62-222	ENST00000600935	GLIS1	Q8NBF1	620 aa		10.88	□□□□□ -0.67
NUP62-222	ENST00000600935	EXD1	Q8NHP7	514 aa		10.88	□□□□□ -0.67
NUP62-222	ENST00000600935	NUDCD1	Q96RS6	583 aa		10.88	□□□□□ -0.67
NUP62-222	ENST00000600935	PCDHB18P	Q96TA0	734 aa		10.88	□□□□□ -0.67
NUP62-222	ENST00000600935	RIOK2	Q9BVS4	552 aa	Known RBP	10.88	□□□□□ -0.67
NUP62-222	ENST00000600935	SP110	Q9HB58	689 aa		10.88	□□□□□ -0.67
NUP62-222	ENST00000600935	SEMA5B	Q9P283	1151 aa		10.88	□□□□□ -0.67
NUP62-222	ENST00000600935	ZNF624	Q9P2J8	865 aa	Predicted RBP	10.88	□□□□□ -0.67
NUP62-222	ENST00000600935	HOOK1	Q9UJC3	728 aa	Known RBP	10.88	□□□□□ -0.67
NUP62-222	ENST00000600935	FARSA	Q9Y285	508 aa	Known RBP	10.88	□□□□□ -0.67
NUP62-222	ENST00000600935	ADGRG1	Q9Y653	693 aa		10.88	□□□□□ -0.67
NUP62-222	ENST00000600935	SPTB	P11277	2137 aa		10.88	□□□□□ -0.67
NUP62-222	ENST00000600935	MAP1A	P78559	2803 aa	Predicted RBP	10.87	□□□□□ -0.67
NUP62-222	ENST00000600935	ZGRF1	Q86YA3	2104 aa		10.87	□□□□□ -0.67
NUP62-222	ENST00000600935	IGHV5-51	A0A0C4DH38	117 aa		10.87	□□□□□ -0.67
NUP62-222	ENST00000600935		A6NL46	340 aa		10.87	□□□□□ -0.67
NUP62-222	ENST00000600935	OR5K4	A6NMS3	321 aa		10.87	□□□□□ -0.67
NUP62-222	ENST00000600935	DFFA	O00273	331 aa		10.87	□□□□□ -0.67
NUP62-222	ENST00000600935	ZNF185	O15231	689 aa		10.87	□□□□□ -0.67
NUP62-222	ENST00000600935	FZD6	O60353	706 aa		10.87	□□□□□ -0.67
NUP62-222	ENST00000600935	ASMTL	O95671	621 aa		10.87	□□□□□ -0.67
NUP62-222	ENST00000600935	PDHA1	P08559	390 aa		10.87	□□□□□ -0.67
NUP62-222	ENST00000600935	SLC2A4	P14672	509 aa		10.87	□□□□□ -0.67
NUP62-222	ENST00000600935	UCHL3	P15374	230 aa		10.87	□□□□□ -0.67
NUP62-222	ENST00000600935	XRCC1	P18887	633 aa	Predicted RBP	10.87	□□□□□ -0.67
NUP62-222	ENST00000600935	RENBP	P51606	427 aa		10.87	□□□□□ -0.67
NUP62-222	ENST00000600935	CLCNKA	P51800	687 aa		10.87	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms