RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 LILRB5O75023 590 aa20.28■□□□□ 0.84
PNKP-215ENST00000600910 SLC25A14O95258 325 aaPredicted RBP20.28■□□□□ 0.84
PNKP-215ENST00000600910 OGNP20774 298 aaKnown RBP20.28■□□□□ 0.84
PNKP-215ENST00000600910 ACRV1P26436 265 aa20.28■□□□□ 0.84
PNKP-215ENST00000600910 PMLP29590 882 aa20.28■□□□□ 0.84
PNKP-215ENST00000600910 DHPSP49366 369 aaPredicted RBP20.28■□□□□ 0.84
PNKP-215ENST00000600910 CDK3Q00526 305 aa20.28■□□□□ 0.84
PNKP-215ENST00000600910 GPRC6AQ5T6X5 926 aa20.28■□□□□ 0.84
PNKP-215ENST00000600910 PHYKPLQ8IUZ5 450 aa20.28■□□□□ 0.84
PNKP-215ENST00000600910 CTAGE3PQ8IX95 158 aa20.28■□□□□ 0.84
PNKP-215ENST00000600910 RGL4Q8IZJ4 473 aa20.28■□□□□ 0.84
PNKP-215ENST00000600910 GDAP1Q8TB36 358 aa20.28■□□□□ 0.84
PNKP-215ENST00000600910 HIC2Q96JB3 615 aa20.28■□□□□ 0.84
PNKP-215ENST00000600910 SLC6A18Q96N87 628 aa20.28■□□□□ 0.84
PNKP-215ENST00000600910 TEX101Q9BY14 249 aa20.28■□□□□ 0.84
PNKP-215ENST00000600910 MIR1-1HGQ9H1L0 117 aa20.28■□□□□ 0.84
PNKP-215ENST00000600910 ARFGAP3Q9NP61 516 aa20.28■□□□□ 0.84
PNKP-215ENST00000600910 FBXO5Q9UKT4 447 aa20.28■□□□□ 0.84
PNKP-215ENST00000600910 HS3ST3A1Q9Y663 406 aa20.28■□□□□ 0.84
PNKP-215ENST00000600910 TTPAP49638 278 aa20.27■□□□□ 0.84
PNKP-215ENST00000600910 STAT4Q14765 748 aa20.27■□□□□ 0.84
PNKP-215ENST00000600910 DBN1Q16643 649 aa20.27■□□□□ 0.84
PNKP-215ENST00000600910 TYSND1Q2T9J0 566 aa20.27■□□□□ 0.84
PNKP-215ENST00000600910 WDR45BQ5MNZ6 344 aa20.27■□□□□ 0.84
PNKP-215ENST00000600910 CERS6Q6ZMG9 384 aa20.27■□□□□ 0.84
PNKP-215ENST00000600910 TRIM74Q86UV6 250 aa20.27■□□□□ 0.84
PNKP-215ENST00000600910 PPM1NQ8N819 430 aa20.27■□□□□ 0.84
PNKP-215ENST00000600910 C2CD4AQ8NCU7 369 aaPredicted RBP20.27■□□□□ 0.84
PNKP-215ENST00000600910 DNASE2BQ8WZ79 361 aa20.27■□□□□ 0.84
PNKP-215ENST00000600910 FUBP1Q96AE4 644 aaKnown RBP20.27■□□□□ 0.84
PNKP-215ENST00000600910 ZC3H10Q96K80 434 aaKnown RBP20.27■□□□□ 0.84
PNKP-215ENST00000600910 APOOQ9BUR5 198 aa20.27■□□□□ 0.84
PNKP-215ENST00000600910 LGR4Q9BXB1 951 aa20.27■□□□□ 0.84
PNKP-215ENST00000600910 PSAT1Q9Y617 370 aa20.27■□□□□ 0.84
PNKP-215ENST00000600910 MTX2O75431 263 aa20.27■□□□□ 0.83
PNKP-215ENST00000600910 ITPKAP23677 461 aa20.27■□□□□ 0.83
PNKP-215ENST00000600910 PFN3P60673 137 aa20.27■□□□□ 0.83
PNKP-215ENST00000600910 MPP1Q00013 466 aa20.27■□□□□ 0.83
PNKP-215ENST00000600910 SIM2Q14190 667 aaPredicted RBP20.27■□□□□ 0.83
PNKP-215ENST00000600910 LYPLAL1Q5VWZ2 237 aa20.27■□□□□ 0.83
PNKP-215ENST00000600910 LYSMD4Q5XG99 296 aa20.27■□□□□ 0.83
PNKP-215ENST00000600910 KYAT3Q6YP21 454 aaKnown RBP20.27■□□□□ 0.83
PNKP-215ENST00000600910 ABI3BPQ7Z7G0 1075 aa20.27■□□□□ 0.83
PNKP-215ENST00000600910 DDHD1Q8NEL9 900 aa20.27■□□□□ 0.83
PNKP-215ENST00000600910 COX14Q96I36 57 aa20.27■□□□□ 0.83
PNKP-215ENST00000600910 TTC1Q99614 292 aa20.27■□□□□ 0.83
PNKP-215ENST00000600910 FBXO6Q9NRD1 293 aaPredicted RBP20.27■□□□□ 0.83
PNKP-215ENST00000600910 AASDHPPTQ9NRN7 309 aa20.27■□□□□ 0.83
PNKP-215ENST00000600910 PHPT1Q9NRX4 125 aaPredicted RBP20.27■□□□□ 0.83
PNKP-215ENST00000600910 ZDHHC3Q9NYG2 299 aa20.27■□□□□ 0.83
PNKP-215ENST00000600910 A6NNZ2 444 aa20.26■□□□□ 0.83
PNKP-215ENST00000600910 RHOBTB1O94844 696 aa20.26■□□□□ 0.83
PNKP-215ENST00000600910 SHBGP04278 402 aa20.26■□□□□ 0.83
PNKP-215ENST00000600910 PPARGP37231 505 aaPredicted RBP20.26■□□□□ 0.83
PNKP-215ENST00000600910 KLHL38Q2WGJ6 581 aa20.26■□□□□ 0.83
PNKP-215ENST00000600910 KHDC1Q4VXA5 237 aaKnown RBP20.26■□□□□ 0.83
PNKP-215ENST00000600910 ZNF789Q5FWF6 425 aa20.26■□□□□ 0.83
PNKP-215ENST00000600910 LDLRAP1Q5SW96 308 aa20.26■□□□□ 0.83
PNKP-215ENST00000600910 ZNF648Q5T619 568 aaPredicted RBP20.26■□□□□ 0.83
PNKP-215ENST00000600910 KIAA0408Q6ZU52 694 aa20.26■□□□□ 0.83
PNKP-215ENST00000600910 MARK2Q7KZI7 788 aaKnown RBP20.26■□□□□ 0.83
PNKP-215ENST00000600910 SLC26A11Q86WA9 606 aa20.26■□□□□ 0.83
PNKP-215ENST00000600910 LRRC6Q86X45 466 aa20.26■□□□□ 0.83
PNKP-215ENST00000600910 MRRFQ96E11 262 aaKnown RBP20.26■□□□□ 0.83
PNKP-215ENST00000600910 CCDC97Q96F63 343 aaPredicted RBP20.26■□□□□ 0.83
PNKP-215ENST00000600910 TCF12Q99081 682 aa20.26■□□□□ 0.83
PNKP-215ENST00000600910 COPS8Q99627 209 aa20.26■□□□□ 0.83
PNKP-215ENST00000600910 BOCQ9BWV1 1114 aa20.26■□□□□ 0.83
PNKP-215ENST00000600910 NSMCE4AQ9NXX6 385 aa20.26■□□□□ 0.83
PNKP-215ENST00000600910 VPS18Q9P253 973 aa20.26■□□□□ 0.83
PNKP-215ENST00000600910 OAS3Q9Y6K5 1087 aaKnown RBP20.26■□□□□ 0.83
PNKP-215ENST00000600910 EXOC1LA0A1B0GW35 172 aa20.25■□□□□ 0.83
PNKP-215ENST00000600910 OR1I1O60431 355 aa20.25■□□□□ 0.83
PNKP-215ENST00000600910 NDUFS3O75489 264 aa20.25■□□□□ 0.83
PNKP-215ENST00000600910 S1PR4O95977 384 aa20.25■□□□□ 0.83
PNKP-215ENST00000600910 MYCLP1P12525 358 aaPredicted RBP20.25■□□□□ 0.83
PNKP-215ENST00000600910 AKT1P31749 480 aa20.25■□□□□ 0.83
PNKP-215ENST00000600910 RACK1P63244 317 aaKnown RBP20.25■□□□□ 0.83
PNKP-215ENST00000600910 NAB1Q13506 487 aa20.25■□□□□ 0.83
PNKP-215ENST00000600910 PRR23BQ6ZRT6 265 aa20.25■□□□□ 0.83
PNKP-215ENST00000600910 STRA8Q7Z7C7 330 aa20.25■□□□□ 0.83
PNKP-215ENST00000600910 OR13H1Q8NG92 308 aa20.25■□□□□ 0.83
PNKP-215ENST00000600910 C1orf216Q8TAB5 229 aa20.25■□□□□ 0.83
PNKP-215ENST00000600910 SCG3Q8WXD2 468 aaKnown RBP20.25■□□□□ 0.83
PNKP-215ENST00000600910 TM9SF3Q9HD45 589 aa20.25■□□□□ 0.83
PNKP-215ENST00000600910 INTS10Q9NVR2 710 aaKnown RBP20.25■□□□□ 0.83
PNKP-215ENST00000600910 R4GN57 208 aa20.25■□□□□ 0.83
PNKP-215ENST00000600910 VPS13AQ96RL7 3174 aa20.25■□□□□ 0.83
PNKP-215ENST00000600910 ATXN2Q99700 1313 aaKnown RBP20.25■□□□□ 0.83
PNKP-215ENST00000600910 IGLV3-16A0A075B6K0 115 aa20.24■□□□□ 0.83
PNKP-215ENST00000600910 POC1B-GALNT4F8VUJ3 575 aa20.24■□□□□ 0.83
PNKP-215ENST00000600910 CACNB4O00305 520 aaPredicted RBP20.24■□□□□ 0.83
PNKP-215ENST00000600910 DLL1O00548 723 aa20.24■□□□□ 0.83
PNKP-215ENST00000600910 PFDN6O15212 129 aa20.24■□□□□ 0.83
PNKP-215ENST00000600910 HAUS5O94927 633 aa20.24■□□□□ 0.83
PNKP-215ENST00000600910 AHSGP02765 367 aa20.24■□□□□ 0.83
PNKP-215ENST00000600910 NUDT17P0C025 328 aa20.24■□□□□ 0.83
PNKP-215ENST00000600910 GABRB3P28472 473 aa20.24■□□□□ 0.83
PNKP-215ENST00000600910 RABIFP47224 123 aa20.24■□□□□ 0.83
PNKP-215ENST00000600910 LEPRP48357 1165 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms