RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 CYBBP04839 570 aa20.09■□□□□ 0.81
SHKBP1-225ENST00000600733 RPS17P08708 135 aaKnown RBP20.09■□□□□ 0.81
SHKBP1-225ENST00000600733 IL10P22301 178 aa20.09■□□□□ 0.81
SHKBP1-225ENST00000600733 SCNN1BP51168 640 aa20.09■□□□□ 0.81
SHKBP1-225ENST00000600733 BTG3Q14201 252 aaPredicted RBP20.09■□□□□ 0.81
SHKBP1-225ENST00000600733 PAGE3Q5JUK9 113 aa20.09■□□□□ 0.81
SHKBP1-225ENST00000600733 FAM171A1Q5VUB5 890 aa20.09■□□□□ 0.81
SHKBP1-225ENST00000600733 MFSD14CQ5VZR4 134 aa20.09■□□□□ 0.81
SHKBP1-225ENST00000600733 GLT6D1Q7Z4J2 308 aa20.09■□□□□ 0.81
SHKBP1-225ENST00000600733 SYVN1Q86TM6 617 aa20.09■□□□□ 0.81
SHKBP1-225ENST00000600733 IFNL1Q8IU54 200 aa20.09■□□□□ 0.81
SHKBP1-225ENST00000600733 DCBLD1Q8N8Z6 715 aa20.09■□□□□ 0.81
SHKBP1-225ENST00000600733 MDGA1Q8NFP4 955 aa20.09■□□□□ 0.81
SHKBP1-225ENST00000600733 LINC01599Q8WXQ3 324 aa20.09■□□□□ 0.81
SHKBP1-225ENST00000600733 TMEM125Q96AQ2 219 aa20.09■□□□□ 0.81
SHKBP1-225ENST00000600733 LIN28AQ9H9Z2 209 aaKnown RBP20.09■□□□□ 0.81
SHKBP1-225ENST00000600733 CLK4Q9HAZ1 481 aaKnown RBP20.09■□□□□ 0.81
SHKBP1-225ENST00000600733 FNDC3AQ9Y2H6 1198 aaKnown RBP20.09■□□□□ 0.81
SHKBP1-225ENST00000600733 MANSC4A6NHS7 340 aaPredicted RBP20.09■□□□□ 0.81
SHKBP1-225ENST00000600733 TLR5O60602 858 aa20.09■□□□□ 0.81
SHKBP1-225ENST00000600733 NDUFS3O75489 264 aa20.09■□□□□ 0.81
SHKBP1-225ENST00000600733 NCK1P16333 377 aa20.09■□□□□ 0.81
SHKBP1-225ENST00000600733 SLC6A4P31645 630 aa20.09■□□□□ 0.81
SHKBP1-225ENST00000600733 CRHR2Q13324 411 aa20.09■□□□□ 0.81
SHKBP1-225ENST00000600733 NFYCQ13952 458 aa20.09■□□□□ 0.81
SHKBP1-225ENST00000600733 PTPRNQ16849 979 aa20.09■□□□□ 0.81
SHKBP1-225ENST00000600733 FUT11Q495W5 492 aa20.09■□□□□ 0.81
SHKBP1-225ENST00000600733 CAMK1DQ8IU85 385 aa20.09■□□□□ 0.81
SHKBP1-225ENST00000600733 B4GALNT2Q8NHY0 566 aa20.09■□□□□ 0.81
SHKBP1-225ENST00000600733 ACOX2Q99424 681 aa20.09■□□□□ 0.81
SHKBP1-225ENST00000600733 MGME1Q9BQP7 344 aa20.09■□□□□ 0.81
SHKBP1-225ENST00000600733 SPON2Q9BUD6 331 aa20.09■□□□□ 0.81
SHKBP1-225ENST00000600733 C1orf50Q9BV19 199 aa20.09■□□□□ 0.81
SHKBP1-225ENST00000600733 SLAMF8Q9P0V8 285 aa20.09■□□□□ 0.81
SHKBP1-225ENST00000600733 RSL24D1Q9UHA3 163 aaKnown RBP20.09■□□□□ 0.81
SHKBP1-225ENST00000600733 OAZ3Q9UMX2 235 aa20.09■□□□□ 0.81
SHKBP1-225ENST00000600733 A0A1W2PP18 115 aa20.08■□□□□ 0.81
SHKBP1-225ENST00000600733 F5H5T6 163 aa20.08■□□□□ 0.81
SHKBP1-225ENST00000600733 TMEM189-UBE2V1I3L0A0 370 aa20.08■□□□□ 0.81
SHKBP1-225ENST00000600733 INPP4BO15327 924 aa20.08■□□□□ 0.81
SHKBP1-225ENST00000600733 FASP25445 335 aa20.08■□□□□ 0.81
SHKBP1-225ENST00000600733 CASP2P42575 452 aa20.08■□□□□ 0.81
SHKBP1-225ENST00000600733 ZFP36L2P47974 494 aaKnown RBP20.08■□□□□ 0.81
SHKBP1-225ENST00000600733 GSK3BP49841 420 aa20.08■□□□□ 0.81
SHKBP1-225ENST00000600733 UFM1P61960 85 aa20.08■□□□□ 0.81
SHKBP1-225ENST00000600733 CYP51A1Q16850 503 aa20.08■□□□□ 0.81
SHKBP1-225ENST00000600733 INTS11Q5TA45 600 aaKnown RBP20.08■□□□□ 0.81
SHKBP1-225ENST00000600733 ALG1LQ6GMV1 187 aa20.08■□□□□ 0.81
SHKBP1-225ENST00000600733 EZH1Q92800 747 aaPredicted RBP20.08■□□□□ 0.81
SHKBP1-225ENST00000600733 MYRFLQ96LU7 910 aa20.08■□□□□ 0.81
SHKBP1-225ENST00000600733 ZNF599Q96NL3 588 aa20.08■□□□□ 0.81
SHKBP1-225ENST00000600733 ALG2Q9H553 416 aa20.08■□□□□ 0.81
SHKBP1-225ENST00000600733 ZFYVE28Q9HCC9 887 aa20.08■□□□□ 0.81
SHKBP1-225ENST00000600733 THEGQ9P2T0 379 aa20.08■□□□□ 0.81
SHKBP1-225ENST00000600733 ASB1Q9Y576 335 aa20.08■□□□□ 0.81
SHKBP1-225ENST00000600733 OAS3Q9Y6K5 1087 aaKnown RBP20.08■□□□□ 0.81
SHKBP1-225ENST00000600733 CHD5Q8TDI0 1954 aa20.08■□□□□ 0.81
SHKBP1-225ENST00000600733 OR1I1O60431 355 aa20.07■□□□□ 0.8
SHKBP1-225ENST00000600733 PRR35P0CG20 571 aa20.07■□□□□ 0.8
SHKBP1-225ENST00000600733 KCNK10P57789 538 aa20.07■□□□□ 0.8
SHKBP1-225ENST00000600733 GNA12Q03113 381 aa20.07■□□□□ 0.8
SHKBP1-225ENST00000600733 ILF2Q12905 390 aaKnown RBP20.07■□□□□ 0.8
SHKBP1-225ENST00000600733 RCAN2Q14206 197 aa20.07■□□□□ 0.8
SHKBP1-225ENST00000600733 OGFOD2Q6N063 350 aa20.07■□□□□ 0.8
SHKBP1-225ENST00000600733 AFTPHQ6ULP2 937 aa20.07■□□□□ 0.8
SHKBP1-225ENST00000600733 SLC24A5Q71RS6 500 aa20.07■□□□□ 0.8
SHKBP1-225ENST00000600733 PIANPQ8IYJ0 282 aa20.07■□□□□ 0.8
SHKBP1-225ENST00000600733 MFSD2AQ8NA29 543 aa20.07■□□□□ 0.8
SHKBP1-225ENST00000600733 OR2T11Q8NH01 316 aa20.07■□□□□ 0.8
SHKBP1-225ENST00000600733 TMEM74Q96NL1 305 aa20.07■□□□□ 0.8
SHKBP1-225ENST00000600733 BIRC8Q96P09 236 aa20.07■□□□□ 0.8
SHKBP1-225ENST00000600733 ADI1Q9BV57 179 aa20.07■□□□□ 0.8
SHKBP1-225ENST00000600733 RIMKLBQ9ULI2 386 aa20.07■□□□□ 0.8
SHKBP1-225ENST00000600733 SQORQ9Y6N5 450 aa20.07■□□□□ 0.8
SHKBP1-225ENST00000600733 FRMPD3Q5JV73 1810 aa20.07■□□□□ 0.8
SHKBP1-225ENST00000600733 RNF103-CHMP3A0A140T963 221 aa20.07■□□□□ 0.8
SHKBP1-225ENST00000600733 NIPSNAP2O75323 286 aa20.07■□□□□ 0.8
SHKBP1-225ENST00000600733 CDK4P11802 303 aa20.07■□□□□ 0.8
SHKBP1-225ENST00000600733 CCT8P50990 548 aa20.07■□□□□ 0.8
SHKBP1-225ENST00000600733 RING1Q06587 406 aa20.07■□□□□ 0.8
SHKBP1-225ENST00000600733 PTPRRQ15256 657 aa20.07■□□□□ 0.8
SHKBP1-225ENST00000600733 PSAPL1Q6NUJ1 521 aa20.07■□□□□ 0.8
SHKBP1-225ENST00000600733 RSPO2Q6UXX9 243 aaPredicted RBP20.07■□□□□ 0.8
SHKBP1-225ENST00000600733 LPCAT2Q7L5N7 544 aa20.07■□□□□ 0.8
SHKBP1-225ENST00000600733 ZNF786Q8N393 782 aa20.07■□□□□ 0.8
SHKBP1-225ENST00000600733 SIDT2Q8NBJ9 832 aaKnown RBP20.07■□□□□ 0.8
SHKBP1-225ENST00000600733 GIPC2Q8TF65 315 aa20.07■□□□□ 0.8
SHKBP1-225ENST00000600733 FAM193BQ96PV7 902 aaPredicted RBP20.07■□□□□ 0.8
SHKBP1-225ENST00000600733 CYP2S1Q96SQ9 504 aa20.07■□□□□ 0.8
SHKBP1-225ENST00000600733 TRIM54Q9BYV2 358 aa20.07■□□□□ 0.8
SHKBP1-225ENST00000600733 GPR62Q9BZJ7 368 aa20.07■□□□□ 0.8
SHKBP1-225ENST00000600733 MUC3BQ9H195 1237 aa20.07■□□□□ 0.8
SHKBP1-225ENST00000600733 AIG1Q9NVV5 245 aa20.07■□□□□ 0.8
SHKBP1-225ENST00000600733 PCTPQ9UKL6 214 aa20.07■□□□□ 0.8
SHKBP1-225ENST00000600733 SLC8A2Q9UPR5 921 aa20.07■□□□□ 0.8
SHKBP1-225ENST00000600733 USP22Q9UPT9 525 aa20.07■□□□□ 0.8
SHKBP1-225ENST00000600733 A0A0U1RQS6 177 aa20.06■□□□□ 0.8
SHKBP1-225ENST00000600733 VPS4BO75351 444 aa20.06■□□□□ 0.8
SHKBP1-225ENST00000600733 SEC24DO94855 1032 aaPredicted RBP20.06■□□□□ 0.8
SHKBP1-225ENST00000600733 CLIC3O95833 236 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms