RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 SEMA5AQ13591 1074 aa8.7□□□□□ -1.02
SSBP4-208ENST00000600628 NR0B2Q15466 257 aa8.7□□□□□ -1.02
SSBP4-208ENST00000600628 TAF1AQ15573 450 aaPredicted RBP8.7□□□□□ -1.02
SSBP4-208ENST00000600628 CYP1B1Q16678 543 aa8.7□□□□□ -1.02
SSBP4-208ENST00000600628 ZNF658BQ4V348 819 aaPredicted RBP8.7□□□□□ -1.02
SSBP4-208ENST00000600628 SEL1L2Q5TEA6 688 aa8.7□□□□□ -1.02
SSBP4-208ENST00000600628 CCDC181Q5TID7 509 aa8.7□□□□□ -1.02
SSBP4-208ENST00000600628 IGF2-ASQ6U949 168 aa8.7□□□□□ -1.02
SSBP4-208ENST00000600628 RD3Q7Z3Z2 195 aa8.7□□□□□ -1.02
SSBP4-208ENST00000600628 ADGRG6Q86SQ4 1221 aa8.7□□□□□ -1.02
SSBP4-208ENST00000600628 PROSER1Q86XN7 944 aa8.7□□□□□ -1.02
SSBP4-208ENST00000600628 DDHD1Q8NEL9 900 aa8.7□□□□□ -1.02
SSBP4-208ENST00000600628 WDR48Q8TAF3 677 aa8.7□□□□□ -1.02
SSBP4-208ENST00000600628 IFI44Q8TCB0 444 aa8.7□□□□□ -1.02
SSBP4-208ENST00000600628 GRAMD1AQ96CP6 724 aa8.7□□□□□ -1.02
SSBP4-208ENST00000600628 ALS2CR12Q96Q35 445 aa8.7□□□□□ -1.02
SSBP4-208ENST00000600628 FERMT1Q9BQL6 677 aa8.7□□□□□ -1.02
SSBP4-208ENST00000600628 FICDQ9BVA6 458 aa8.7□□□□□ -1.02
SSBP4-208ENST00000600628 GPR63Q9BZJ6 419 aa8.7□□□□□ -1.02
SSBP4-208ENST00000600628 NRSN2Q9GZP1 204 aa8.7□□□□□ -1.02
SSBP4-208ENST00000600628 TAAR2Q9P1P5 351 aa8.7□□□□□ -1.02
SSBP4-208ENST00000600628 ATXN10Q9UBB4 475 aa8.7□□□□□ -1.02
SSBP4-208ENST00000600628 GULP1Q9UBP9 304 aa8.7□□□□□ -1.02
SSBP4-208ENST00000600628 RIMKLBQ9ULI2 386 aa8.7□□□□□ -1.02
SSBP4-208ENST00000600628 GPR34Q9UPC5 381 aa8.7□□□□□ -1.02
SSBP4-208ENST00000600628 CLCA2Q9UQC9 943 aa8.7□□□□□ -1.02
SSBP4-208ENST00000600628 TMEM98Q9Y2Y6 226 aa8.7□□□□□ -1.02
SSBP4-208ENST00000600628 NEU2Q9Y3R4 380 aa8.7□□□□□ -1.02
SSBP4-208ENST00000600628 JRKLQ9Y4A0 524 aa8.7□□□□□ -1.02
SSBP4-208ENST00000600628 PLEKHM1Q9Y4G2 1056 aa8.7□□□□□ -1.02
SSBP4-208ENST00000600628 ARL5AQ9Y689 179 aa8.7□□□□□ -1.02
SSBP4-208ENST00000600628 IGSF10Q6WRI0 2623 aa8.7□□□□□ -1.02
SSBP4-208ENST00000600628 BSNQ9UPA5 3926 aa8.69□□□□□ -1.02
SSBP4-208ENST00000600628 IGLV3-16A0A075B6K0 115 aa8.69□□□□□ -1.02
SSBP4-208ENST00000600628 A0A1W2PQM1 296 aa8.69□□□□□ -1.02
SSBP4-208ENST00000600628 CPED1A4D0V7 1026 aa8.69□□□□□ -1.02
SSBP4-208ENST00000600628 SRRM3A6NNA2 597 aaPredicted RBP8.69□□□□□ -1.02
SSBP4-208ENST00000600628 ERI2A8K979 691 aaKnown RBP8.69□□□□□ -1.02
SSBP4-208ENST00000600628 CES2O00748 559 aa8.69□□□□□ -1.02
SSBP4-208ENST00000600628 SGTAO43765 313 aa8.69□□□□□ -1.02
SSBP4-208ENST00000600628 VEGFDO43915 354 aa8.69□□□□□ -1.02
SSBP4-208ENST00000600628 DXOO77932 396 aaKnown RBP8.69□□□□□ -1.02
SSBP4-208ENST00000600628 EML2O95834 649 aa8.69□□□□□ -1.02
SSBP4-208ENST00000600628 MT-CO3P00414 261 aa8.69□□□□□ -1.02
SSBP4-208ENST00000600628 ATP1A1P05023 1023 aaKnown RBP8.69□□□□□ -1.02
SSBP4-208ENST00000600628 GLB1P16278 677 aa8.69□□□□□ -1.02
SSBP4-208ENST00000600628 ZNF8P17098 575 aaPredicted RBP8.69□□□□□ -1.02
SSBP4-208ENST00000600628 LPOP22079 712 aaPredicted RBP8.69□□□□□ -1.02
SSBP4-208ENST00000600628 AK4P27144 223 aaPredicted RBP8.69□□□□□ -1.02
SSBP4-208ENST00000600628 MAGEA6P43360 314 aa8.69□□□□□ -1.02
SSBP4-208ENST00000600628 GNPDA1P46926 289 aa8.69□□□□□ -1.02
SSBP4-208ENST00000600628 RPIAP49247 311 aa8.69□□□□□ -1.02
SSBP4-208ENST00000600628 B4GALNT1Q00973 533 aa8.69□□□□□ -1.02
SSBP4-208ENST00000600628 ACVR1Q04771 509 aa8.69□□□□□ -1.02
SSBP4-208ENST00000600628 CYP4F3Q08477 520 aa8.69□□□□□ -1.02
SSBP4-208ENST00000600628 DMPKQ09013 629 aa8.69□□□□□ -1.02
SSBP4-208ENST00000600628 PEX6Q13608 980 aa8.69□□□□□ -1.02
SSBP4-208ENST00000600628 C14orf28Q4W4Y0 310 aa8.69□□□□□ -1.02
SSBP4-208ENST00000600628 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.69□□□□□ -1.02
SSBP4-208ENST00000600628 CCDC70Q6NSX1 233 aa8.69□□□□□ -1.02
SSBP4-208ENST00000600628 WASH2PQ6VEQ5 465 aa8.69□□□□□ -1.02
SSBP4-208ENST00000600628 EFL1Q7Z2Z2 1120 aaKnown RBP8.69□□□□□ -1.02
SSBP4-208ENST00000600628 GLT6D1Q7Z4J2 308 aa8.69□□□□□ -1.02
SSBP4-208ENST00000600628 SPRED1Q7Z699 444 aa8.69□□□□□ -1.02
SSBP4-208ENST00000600628 TAF8Q7Z7C8 310 aa8.69□□□□□ -1.02
SSBP4-208ENST00000600628 SFRP1Q8N474 314 aa8.69□□□□□ -1.02
SSBP4-208ENST00000600628 SLC25A41Q8N5S1 370 aa8.69□□□□□ -1.02
SSBP4-208ENST00000600628 PRELID2Q8N945 189 aa8.69□□□□□ -1.02
SSBP4-208ENST00000600628 FAM46DQ8NEK8 389 aa8.69□□□□□ -1.02
SSBP4-208ENST00000600628 MDM1Q8TC05 714 aa8.69□□□□□ -1.02
SSBP4-208ENST00000600628 SCG3Q8WXD2 468 aaKnown RBP8.69□□□□□ -1.02
SSBP4-208ENST00000600628 GLMNQ92990 594 aa8.69□□□□□ -1.02
SSBP4-208ENST00000600628 PRR11Q96HE9 360 aaPredicted RBP8.69□□□□□ -1.02
SSBP4-208ENST00000600628 OR2M4Q96R27 311 aa8.69□□□□□ -1.02
SSBP4-208ENST00000600628 TBL1YQ9BQ87 522 aa8.69□□□□□ -1.02
SSBP4-208ENST00000600628 SPATA16Q9BXB7 569 aa8.69□□□□□ -1.02
SSBP4-208ENST00000600628 FSD1LQ9BXM9 530 aa8.69□□□□□ -1.02
SSBP4-208ENST00000600628 GSDMCQ9BYG8 508 aa8.69□□□□□ -1.02
SSBP4-208ENST00000600628 LRRC40Q9H9A6 602 aa8.69□□□□□ -1.02
SSBP4-208ENST00000600628 WASH6PQ9NQA3 447 aa8.69□□□□□ -1.02
SSBP4-208ENST00000600628 KCND1Q9NSA2 647 aa8.69□□□□□ -1.02
SSBP4-208ENST00000600628 DOLKQ9UPQ8 538 aa8.69□□□□□ -1.02
SSBP4-208ENST00000600628 KCTD3Q9Y597 815 aa8.69□□□□□ -1.02
SSBP4-208ENST00000600628 FAM208BQ5VWN6 2430 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 F5H423 210 aaPredicted RBP8.68□□□□□ -1.02
SSBP4-208ENST00000600628 FANCGO15287 622 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 INPP4BO15327 924 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 GPR39O43194 453 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 PSMD3O43242 534 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 GRID2O43424 1007 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 B4GAT1O43505 415 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 USP12O75317 370 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 STK10O94804 968 aaKnown RBP8.68□□□□□ -1.02
SSBP4-208ENST00000600628 SLC25A14O95258 325 aaPredicted RBP8.68□□□□□ -1.02
SSBP4-208ENST00000600628 FGGP02679 453 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 SPAM1P38567 509 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 GPR3P46089 330 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 PDE1BQ01064 536 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 ZFP36L1Q07352 338 aaKnown RBP8.68□□□□□ -1.02
SSBP4-208ENST00000600628 ILF3Q12906 894 aaKnown RBP eCLIP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms