RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 NOA1Q8NC60 698 aaKnown RBP19.17■□□□□ 0.66
UPF1-209ENST00000600310 SAP25Q8TEE9 199 aa19.17■□□□□ 0.66
UPF1-209ENST00000600310 PDXPQ96GD0 296 aa19.17■□□□□ 0.66
UPF1-209ENST00000600310 SIGLEC10Q96LC7 697 aa19.17■□□□□ 0.66
UPF1-209ENST00000600310 CARD6Q9BX69 1037 aa19.17■□□□□ 0.66
UPF1-209ENST00000600310 DPH5Q9H2P9 285 aa19.17■□□□□ 0.66
UPF1-209ENST00000600310 SUDS3Q9H7L9 328 aaPredicted RBP19.17■□□□□ 0.66
UPF1-209ENST00000600310 CAAP1Q9H8G2 361 aa19.17■□□□□ 0.66
UPF1-209ENST00000600310 L2HGDHQ9H9P8 463 aa19.17■□□□□ 0.66
UPF1-209ENST00000600310 MRPL40Q9NQ50 206 aaKnown RBP19.17■□□□□ 0.66
UPF1-209ENST00000600310 TREX1Q9NSU2 369 aa19.17■□□□□ 0.66
UPF1-209ENST00000600310 VPS18Q9P253 973 aa19.17■□□□□ 0.66
UPF1-209ENST00000600310 SLC30A1Q9Y6M5 507 aa19.17■□□□□ 0.66
UPF1-209ENST00000600310 DCHS1Q96JQ0 3298 aa19.17■□□□□ 0.66
UPF1-209ENST00000600310 ADAMTS9Q9P2N4 1935 aa19.16■□□□□ 0.66
UPF1-209ENST00000600310 CCDC162PA2VCL2 907 aa19.16■□□□□ 0.66
UPF1-209ENST00000600310 GPR39O43194 453 aa19.16■□□□□ 0.66
UPF1-209ENST00000600310 ASMTLO95671 621 aa19.16■□□□□ 0.66
UPF1-209ENST00000600310 FUCA1P04066 466 aa19.16■□□□□ 0.66
UPF1-209ENST00000600310 NMBRP28336 390 aa19.16■□□□□ 0.66
UPF1-209ENST00000600310 POLD2P49005 469 aa19.16■□□□□ 0.66
UPF1-209ENST00000600310 DRG2P55039 364 aaKnown RBP19.16■□□□□ 0.66
UPF1-209ENST00000600310 BNIP3Q12983 259 aa19.16■□□□□ 0.66
UPF1-209ENST00000600310 SUZ12Q15022 739 aaKnown RBP19.16■□□□□ 0.66
UPF1-209ENST00000600310 UAP1L1Q3KQV9 507 aa19.16■□□□□ 0.66
UPF1-209ENST00000600310 GPR33Q49SQ1 333 aa19.16■□□□□ 0.66
UPF1-209ENST00000600310 DNTTIP2Q5QJE6 756 aaKnown RBP19.16■□□□□ 0.66
UPF1-209ENST00000600310 DOK6Q6PKX4 331 aa19.16■□□□□ 0.66
UPF1-209ENST00000600310 KANSL1Q7Z3B3 1105 aa19.16■□□□□ 0.66
UPF1-209ENST00000600310 RD3Q7Z3Z2 195 aa19.16■□□□□ 0.66
UPF1-209ENST00000600310 RBFAQ8N0V3 343 aa19.16■□□□□ 0.66
UPF1-209ENST00000600310 AGGF1Q8N302 714 aaeCLIP19.16■□□□□ 0.66
UPF1-209ENST00000600310 DDHD1Q8NEL9 900 aa19.16■□□□□ 0.66
UPF1-209ENST00000600310 HDAC10Q969S8 669 aa19.16■□□□□ 0.66
UPF1-209ENST00000600310 ULK4Q96C45 1275 aa19.16■□□□□ 0.66
UPF1-209ENST00000600310 SGSM3Q96HU1 749 aa19.16■□□□□ 0.66
UPF1-209ENST00000600310 SLC13A1Q9BZW2 595 aa19.16■□□□□ 0.66
UPF1-209ENST00000600310 TCEAL2Q9H3H9 227 aaPredicted RBP19.16■□□□□ 0.66
UPF1-209ENST00000600310 CYP4F12Q9HCS2 524 aa19.16■□□□□ 0.66
UPF1-209ENST00000600310 SPASTQ9UBP0 616 aa19.16■□□□□ 0.66
UPF1-209ENST00000600310 APOBEC3BQ9UH17 382 aaKnown RBP19.16■□□□□ 0.66
UPF1-209ENST00000600310 FAM237BA0A1B0GVD1 139 aa19.15■□□□□ 0.66
UPF1-209ENST00000600310 VEGFDO43915 354 aa19.15■□□□□ 0.66
UPF1-209ENST00000600310 SDC3O75056 442 aa19.15■□□□□ 0.66
UPF1-209ENST00000600310 CD59P13987 128 aa19.15■□□□□ 0.66
UPF1-209ENST00000600310 DGKAP23743 735 aa19.15■□□□□ 0.66
UPF1-209ENST00000600310 SLC7A5Q01650 507 aa19.15■□□□□ 0.66
UPF1-209ENST00000600310 CACNG1Q06432 222 aa19.15■□□□□ 0.66
UPF1-209ENST00000600310 CALCOCO2Q13137 446 aa19.15■□□□□ 0.66
UPF1-209ENST00000600310 KHDC1Q4VXA5 237 aaKnown RBP19.15■□□□□ 0.66
UPF1-209ENST00000600310 DNAJC21Q5F1R6 531 aaKnown RBP19.15■□□□□ 0.66
UPF1-209ENST00000600310 LDLRAP1Q5SW96 308 aa19.15■□□□□ 0.66
UPF1-209ENST00000600310 FNBP1LQ5T0N5 605 aa19.15■□□□□ 0.66
UPF1-209ENST00000600310 GPRC6AQ5T6X5 926 aa19.15■□□□□ 0.66
UPF1-209ENST00000600310 CASC4Q6P4E1 433 aa19.15■□□□□ 0.66
UPF1-209ENST00000600310 AFTPHQ6ULP2 937 aa19.15■□□□□ 0.66
UPF1-209ENST00000600310 ADGRG6Q86SQ4 1221 aa19.15■□□□□ 0.66
UPF1-209ENST00000600310 GATAD2AQ86YP4 633 aa19.15■□□□□ 0.66
UPF1-209ENST00000600310 MFSD3Q96ES6 412 aa19.15■□□□□ 0.66
UPF1-209ENST00000600310 LRRC61Q9BV99 259 aa19.15■□□□□ 0.66
UPF1-209ENST00000600310 RMI1Q9H9A7 625 aa19.15■□□□□ 0.66
UPF1-209ENST00000600310 ARFGAP3Q9NP61 516 aa19.15■□□□□ 0.66
UPF1-209ENST00000600310 GRHL1Q9NZI5 618 aa19.15■□□□□ 0.66
UPF1-209ENST00000600310 SAMD15Q9P1V8 674 aa19.15■□□□□ 0.66
UPF1-209ENST00000600310 ATXN10Q9UBB4 475 aa19.15■□□□□ 0.66
UPF1-209ENST00000600310 MOSPD1Q9UJG1 213 aa19.15■□□□□ 0.66
UPF1-209ENST00000600310 SUFUQ9UMX1 484 aa19.15■□□□□ 0.66
UPF1-209ENST00000600310 ZNF292O60281 2723 aa19.14■□□□□ 0.65
UPF1-209ENST00000600310 TRBV5-4A0A0C4DH59 114 aa19.14■□□□□ 0.65
UPF1-209ENST00000600310 GPR89AB7ZAQ6 455 aa19.14■□□□□ 0.65
UPF1-209ENST00000600310 DNAJC6O75061 913 aa19.14■□□□□ 0.65
UPF1-209ENST00000600310 MTX2O75431 263 aa19.14■□□□□ 0.65
UPF1-209ENST00000600310 GPR89BP0CG08 455 aa19.14■□□□□ 0.65
UPF1-209ENST00000600310 FOXN2P32314 431 aa19.14■□□□□ 0.65
UPF1-209ENST00000600310 PRAMEP78395 509 aa19.14■□□□□ 0.65
UPF1-209ENST00000600310 CBLBQ13191 982 aa19.14■□□□□ 0.65
UPF1-209ENST00000600310 GLE1Q53GS7 698 aaKnown RBP19.14■□□□□ 0.65
UPF1-209ENST00000600310 ZRANB3Q5FWF4 1079 aa19.14■□□□□ 0.65
UPF1-209ENST00000600310 ZNF648Q5T619 568 aaPredicted RBP19.14■□□□□ 0.65
UPF1-209ENST00000600310 MICALCLQ6ZW33 695 aa19.14■□□□□ 0.65
UPF1-209ENST00000600310 TMEM135Q86UB9 458 aa19.14■□□□□ 0.65
UPF1-209ENST00000600310 PDIK1LQ8N165 341 aa19.14■□□□□ 0.65
UPF1-209ENST00000600310 SLC25A45Q8N413 288 aa19.14■□□□□ 0.65
UPF1-209ENST00000600310 ZNF548Q8NEK5 533 aaPredicted RBP19.14■□□□□ 0.65
UPF1-209ENST00000600310 GDAP1Q8TB36 358 aa19.14■□□□□ 0.65
UPF1-209ENST00000600310 FAM96AQ9H5X1 160 aa19.14■□□□□ 0.65
UPF1-209ENST00000600310 CARS2Q9HA77 564 aaKnown RBP19.14■□□□□ 0.65
UPF1-209ENST00000600310 UCKL1Q9NWZ5 548 aa19.14■□□□□ 0.65
UPF1-209ENST00000600310 CRLS1Q9UJA2 301 aa19.14■□□□□ 0.65
UPF1-209ENST00000600310 CSNK1G3Q9Y6M4 447 aa19.14■□□□□ 0.65
UPF1-209ENST00000600310 FRYLO94915 3013 aa19.14■□□□□ 0.65
UPF1-209ENST00000600310 MYLKQ15746 1914 aa19.13■□□□□ 0.65
UPF1-209ENST00000600310 OR51F1A6NGY5 319 aa19.13■□□□□ 0.65
UPF1-209ENST00000600310 SLC30A4O14863 429 aa19.13■□□□□ 0.65
UPF1-209ENST00000600310 NUAK1O60285 661 aa19.13■□□□□ 0.65
UPF1-209ENST00000600310 GOT2P00505 430 aaKnown RBP19.13■□□□□ 0.65
UPF1-209ENST00000600310 CTSEP14091 401 aa19.13■□□□□ 0.65
UPF1-209ENST00000600310 ZNF8P17098 575 aaPredicted RBP19.13■□□□□ 0.65
UPF1-209ENST00000600310 GNPDA1P46926 289 aa19.13■□□□□ 0.65
UPF1-209ENST00000600310 ID4P47928 161 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms