RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 FAM96AQ9H5X1 160 aa12.54□□□□□ -0.4
CHMP2A-206ENST00000600118 AASDHPPTQ9NRN7 309 aa12.54□□□□□ -0.4
CHMP2A-206ENST00000600118 PHPT1Q9NRX4 125 aaPredicted RBP12.54□□□□□ -0.4
CHMP2A-206ENST00000600118 CATSPERZQ9NTU4 200 aa12.54□□□□□ -0.4
CHMP2A-206ENST00000600118 IL1RAPL1Q9NZN1 696 aa12.54□□□□□ -0.4
CHMP2A-206ENST00000600118 SUSD2Q9UGT4 822 aa12.54□□□□□ -0.4
CHMP2A-206ENST00000600118 CRLS1Q9UJA2 301 aa12.54□□□□□ -0.4
CHMP2A-206ENST00000600118 PCDHGA5Q9Y5G8 931 aa12.54□□□□□ -0.4
CHMP2A-206ENST00000600118 OAS3Q9Y6K5 1087 aaKnown RBP12.54□□□□□ -0.4
CHMP2A-206ENST00000600118 PLXNA2O75051 1894 aa12.54□□□□□ -0.4
CHMP2A-206ENST00000600118 MUC6Q6W4X9 2439 aa12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 TLR4O00206 839 aa12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 CACNB4O00305 520 aaPredicted RBP12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 INPP4BO15327 924 aa12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 ERVK-10P10266 1014 aa12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 GNSP15586 552 aa12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 OGNP20774 298 aaKnown RBP12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 ACRV1P26436 265 aa12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 AFF3P51826 1226 aaKnown RBP12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 NXPH1P58417 271 aa12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 MGAT5Q09328 741 aa12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 NFATC4Q14934 902 aa12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 SMAD1Q15797 465 aaKnown RBP12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 LPAL2Q16609 132 aa12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 TYSND1Q2T9J0 566 aa12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 FASTKD1Q53R41 847 aaKnown RBP12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 HSP90AA5PQ58FG0 334 aa12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 AARS2Q5JTZ9 985 aaKnown RBP12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 LDLRAP1Q5SW96 308 aa12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 LAIR1Q6GTX8 287 aa12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 MRNIPQ6NTE8 343 aa12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 EMBQ6PCB8 327 aa12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 LAYNQ6UX15 382 aa12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 CERS6Q6ZMG9 384 aa12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 MACC1Q6ZN28 852 aa12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 TRMT10CQ7L0Y3 403 aaKnown RBP12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 TRIM74Q86UV6 250 aa12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 DCP2Q8IU60 420 aaKnown RBP12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 PHYKPLQ8IUZ5 450 aa12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 PNPLA1Q8N8W4 532 aa12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 PIGKQ92643 395 aa12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 CAVIN3Q969G5 261 aa12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 KLHDC7BQ96G42 594 aa12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 FAM167BQ9BTA0 163 aa12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 EPB41L4BQ9H329 900 aa12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 TRIM39Q9HCM9 518 aa12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 ZDHHC3Q9NYG2 299 aa12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 RAB23Q9ULC3 237 aa12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 SLC17A4Q9Y2C5 497 aa12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 GPR179Q6PRD1 2367 aa12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 ZNF106Q9H2Y7 1883 aaKnown RBP12.53□□□□□ -0.4
CHMP2A-206ENST00000600118 SPTY2D1-AS1A0A0U1RR47 76 aa12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 TMEM202A6NGA9 273 aa12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 FAM159BA6NKW6 160 aa12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 TNFRSF10CO14798 259 aa12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 SLC25A14O95258 325 aaPredicted RBP12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 CEACAM5P06731 702 aa12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 ABHD2P08910 425 aa12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 CSNK1EP49674 416 aaKnown RBP12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 PMS2P54278 862 aa12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 B4GALNT1Q00973 533 aa12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 BNC1Q01954 994 aa12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 THOC5Q13769 683 aaKnown RBP12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 PDE1CQ14123 709 aaPredicted RBP12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 FZD2Q14332 565 aa12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 ITIH4Q14624 930 aa12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 PLA2G2CQ5R387 149 aa12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 TEDDM1Q5T9Z0 273 aa12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 LYPLAL1Q5VWZ2 237 aa12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 ZNF470Q6ECI4 717 aa12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 PACS1Q6VY07 963 aa12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 CAPN12Q6ZSI9 719 aa12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 TAS2R42Q7RTR8 314 aa12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 RABEPKQ7Z6M1 372 aa12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 ADGRG6Q86SQ4 1221 aa12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 LDB1Q86U70 411 aaPredicted RBP12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 SPATS2Q86XZ4 545 aaKnown RBP12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 CILP2Q8IUL8 1156 aa12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 DENND6AQ8IWF6 608 aa12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 C2CD4AQ8NCU7 369 aaPredicted RBP12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 CEP76Q8TAP6 659 aa12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 CALML6Q8TD86 181 aa12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 HEXDCQ8WVB3 486 aa12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 CCDC97Q96F63 343 aaPredicted RBP12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 SCARF2Q96GP6 870 aaPredicted RBP12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 WDR92Q96MX6 357 aa12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 TCF12Q99081 682 aa12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 COPS8Q99627 209 aa12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 VPS37BQ9H9H4 285 aa12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 CAPN10Q9HC96 672 aa12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 ARFGAP3Q9NP61 516 aa12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 SMYD2Q9NRG4 433 aa12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 FAM86C1Q9NVL1 165 aa12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 VPS18Q9P253 973 aa12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 FBXO5Q9UKT4 447 aa12.52□□□□□ -0.41
CHMP2A-206ENST00000600118 TNRC6BQ9UPQ9 1833 aaKnown RBP12.51□□□□□ -0.41
CHMP2A-206ENST00000600118 A0A1B0GVT2 93 aa12.51□□□□□ -0.41
CHMP2A-206ENST00000600118 GPR89AB7ZAQ6 455 aa12.51□□□□□ -0.41
CHMP2A-206ENST00000600118 RIPK2O43353 540 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms