RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 FASNP49327 2511 aaKnown RBP14.02□□□□□ -0.17
LIG1-218ENST00000599322 OR5K4A6NMS3 321 aa14.01□□□□□ -0.17
LIG1-218ENST00000599322 VEGFDO43915 354 aa14.01□□□□□ -0.17
LIG1-218ENST00000599322 CRTAMO95727 393 aa14.01□□□□□ -0.17
LIG1-218ENST00000599322 GAS8O95995 478 aa14.01□□□□□ -0.17
LIG1-218ENST00000599322 AK4P27144 223 aaPredicted RBP14.01□□□□□ -0.17
LIG1-218ENST00000599322 ALDH4A1P30038 563 aa14.01□□□□□ -0.17
LIG1-218ENST00000599322 SPAM1P38567 509 aa14.01□□□□□ -0.17
LIG1-218ENST00000599322 LSSP48449 732 aa14.01□□□□□ -0.17
LIG1-218ENST00000599322 INHBCP55103 352 aa14.01□□□□□ -0.17
LIG1-218ENST00000599322 GABREP78334 506 aa14.01□□□□□ -0.17
LIG1-218ENST00000599322 CCL7P80098 99 aa14.01□□□□□ -0.17
LIG1-218ENST00000599322 EIF3IQ13347 325 aaKnown RBP14.01□□□□□ -0.17
LIG1-218ENST00000599322 ITGA9Q13797 1035 aa14.01□□□□□ -0.17
LIG1-218ENST00000599322 HLTFQ14527 1009 aaKnown RBP eCLIP14.01□□□□□ -0.17
LIG1-218ENST00000599322 P3H1Q32P28 736 aa14.01□□□□□ -0.17
LIG1-218ENST00000599322 FOXR1Q6PIV2 292 aa14.01□□□□□ -0.17
LIG1-218ENST00000599322 ARL14Q8N4G2 192 aa14.01□□□□□ -0.17
LIG1-218ENST00000599322 GPR26Q8NDV2 337 aa14.01□□□□□ -0.17
LIG1-218ENST00000599322 WDR36Q8NI36 951 aaKnown RBP14.01□□□□□ -0.17
LIG1-218ENST00000599322 FGF11Q92914 225 aa14.01□□□□□ -0.17
LIG1-218ENST00000599322 SH3KBP1Q96B97 665 aa14.01□□□□□ -0.17
LIG1-218ENST00000599322 OXNAD1Q96HP4 312 aaPredicted RBP14.01□□□□□ -0.17
LIG1-218ENST00000599322 HES6Q96HZ4 224 aa14.01□□□□□ -0.17
LIG1-218ENST00000599322 MRGPRX2Q96LB1 330 aa14.01□□□□□ -0.17
LIG1-218ENST00000599322 DCBLD2Q96PD2 775 aa14.01□□□□□ -0.17
LIG1-218ENST00000599322 BPIFA1Q9NP55 256 aa14.01□□□□□ -0.17
LIG1-218ENST00000599322 THSD1Q9NS62 852 aa14.01□□□□□ -0.17
LIG1-218ENST00000599322 BPTFQ12830 3046 aa14□□□□□ -0.17
LIG1-218ENST00000599322 CCDC187A0A096LP49 1063 aa14□□□□□ -0.17
LIG1-218ENST00000599322 C5orf60A6NFR6 353 aa14□□□□□ -0.17
LIG1-218ENST00000599322 FADS2P1A8MWK0 482 aa14□□□□□ -0.17
LIG1-218ENST00000599322 KMOO15229 486 aa14□□□□□ -0.17
LIG1-218ENST00000599322 NUAK1O60285 661 aa14□□□□□ -0.17
LIG1-218ENST00000599322 NOBOXO60393 691 aa14□□□□□ -0.17
LIG1-218ENST00000599322 CDK14O94921 469 aa14□□□□□ -0.17
LIG1-218ENST00000599322 ECEL1O95672 775 aa14□□□□□ -0.17
LIG1-218ENST00000599322 BPIP17213 487 aa14□□□□□ -0.17
LIG1-218ENST00000599322 LPOP22079 712 aaPredicted RBP14□□□□□ -0.17
LIG1-218ENST00000599322 STIP1P31948 543 aaKnown RBP14□□□□□ -0.17
LIG1-218ENST00000599322 GPR3P46089 330 aa14□□□□□ -0.17
LIG1-218ENST00000599322 CLPPQ16740 277 aaPredicted RBP14□□□□□ -0.17
LIG1-218ENST00000599322 INSCQ1MX18 579 aa14□□□□□ -0.17
LIG1-218ENST00000599322 PARP6Q2NL67 630 aa14□□□□□ -0.17
LIG1-218ENST00000599322 MAP9Q49MG5 647 aa14□□□□□ -0.17
LIG1-218ENST00000599322 SOWAHCQ53LP3 525 aaPredicted RBP14□□□□□ -0.17
LIG1-218ENST00000599322 C3orf38Q5JPI3 329 aa14□□□□□ -0.17
LIG1-218ENST00000599322 KCTD16Q68DU8 428 aa14□□□□□ -0.17
LIG1-218ENST00000599322 NYAP1Q6ZVC0 841 aa14□□□□□ -0.17
LIG1-218ENST00000599322 PIM3Q86V86 326 aa14□□□□□ -0.17
LIG1-218ENST00000599322 LRRC8AQ8IWT6 810 aa14□□□□□ -0.17
LIG1-218ENST00000599322 CCDC110Q8TBZ0 833 aa14□□□□□ -0.17
LIG1-218ENST00000599322 HNRNPLLQ8WVV9 542 aaKnown RBP14□□□□□ -0.17
LIG1-218ENST00000599322 MAIP1Q8WWC4 291 aa14□□□□□ -0.17
LIG1-218ENST00000599322 AHCYL2Q96HN2 611 aaKnown RBP14□□□□□ -0.17
LIG1-218ENST00000599322 ZNF578Q96N58 590 aaPredicted RBP14□□□□□ -0.17
LIG1-218ENST00000599322 VPS35Q96QK1 796 aa14□□□□□ -0.17
LIG1-218ENST00000599322 DPYSL5Q9BPU6 564 aa14□□□□□ -0.17
LIG1-218ENST00000599322 FAM118BQ9BPY3 351 aa14□□□□□ -0.17
LIG1-218ENST00000599322 HERPUD2Q9BSE4 406 aa14□□□□□ -0.17
LIG1-218ENST00000599322 OR2AG1Q9H205 316 aa14□□□□□ -0.17
LIG1-218ENST00000599322 C10orf88Q9H8K7 445 aa14□□□□□ -0.17
LIG1-218ENST00000599322 EPB41L5Q9HCM4 733 aa14□□□□□ -0.17
LIG1-218ENST00000599322 LZTFL1Q9NQ48 299 aa14□□□□□ -0.17
LIG1-218ENST00000599322 PCDHB1Q9Y5F3 818 aa14□□□□□ -0.17
LIG1-218ENST00000599322 SPO11Q9Y5K1 396 aa14□□□□□ -0.17
LIG1-218ENST00000599322 RNF215Q9Y6U7 377 aa14□□□□□ -0.17
LIG1-218ENST00000599322 GLYATL1P3A0A0U1RQE8 302 aa13.99□□□□□ -0.17
LIG1-218ENST00000599322 DDX3YO15523 660 aaKnown RBP13.99□□□□□ -0.17
LIG1-218ENST00000599322 BRINP1O60477 761 aa13.99□□□□□ -0.17
LIG1-218ENST00000599322 SNX2O60749 519 aa13.99□□□□□ -0.17
LIG1-218ENST00000599322 AGTP01019 485 aa13.99□□□□□ -0.17
LIG1-218ENST00000599322 FUCA1P04066 466 aa13.99□□□□□ -0.17
LIG1-218ENST00000599322 MPOP05164 745 aa13.99□□□□□ -0.17
LIG1-218ENST00000599322 ACP5P13686 325 aa13.99□□□□□ -0.17
LIG1-218ENST00000599322 PSMB4P28070 264 aa13.99□□□□□ -0.17
LIG1-218ENST00000599322 MLLT3P42568 568 aaPredicted RBP13.99□□□□□ -0.17
LIG1-218ENST00000599322 CHRNA4P43681 627 aa13.99□□□□□ -0.17
LIG1-218ENST00000599322 LMAN1P49257 510 aa13.99□□□□□ -0.17
LIG1-218ENST00000599322 MAZP56270 477 aaKnown RBP13.99□□□□□ -0.17
LIG1-218ENST00000599322 AMZ1Q400G9 498 aa13.99□□□□□ -0.17
LIG1-218ENST00000599322 LDLRAP1Q5SW96 308 aa13.99□□□□□ -0.17
LIG1-218ENST00000599322 FAM182AQ5T1J6 154 aa13.99□□□□□ -0.17
LIG1-218ENST00000599322 AADACL2Q6P093 401 aa13.99□□□□□ -0.17
LIG1-218ENST00000599322 SLC9B2Q86UD5 537 aa13.99□□□□□ -0.17
LIG1-218ENST00000599322 LRRTM4Q86VH4 590 aa13.99□□□□□ -0.17
LIG1-218ENST00000599322 NRROSQ86YC3 692 aa13.99□□□□□ -0.17
LIG1-218ENST00000599322 FAM71DQ8N9W8 422 aa13.99□□□□□ -0.17
LIG1-218ENST00000599322 TRIM58Q8NG06 486 aa13.99□□□□□ -0.17
LIG1-218ENST00000599322 DTX3LQ8TDB6 740 aa13.99□□□□□ -0.17
LIG1-218ENST00000599322 TMEM159Q96B96 161 aa13.99□□□□□ -0.17
LIG1-218ENST00000599322 CCDC97Q96F63 343 aaPredicted RBP13.99□□□□□ -0.17
LIG1-218ENST00000599322 ATXN7L3BQ96GX2 97 aa13.99□□□□□ -0.17
LIG1-218ENST00000599322 WDR24Q96S15 920 aa13.99□□□□□ -0.17
LIG1-218ENST00000599322 SLC38A3Q99624 504 aa13.99□□□□□ -0.17
LIG1-218ENST00000599322 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.99□□□□□ -0.17
LIG1-218ENST00000599322 OSGEPL1Q9H4B0 414 aa13.99□□□□□ -0.17
LIG1-218ENST00000599322 ATXN10Q9UBB4 475 aa13.99□□□□□ -0.17
LIG1-218ENST00000599322 CNOT6Q9ULM6 557 aaKnown RBP13.99□□□□□ -0.17
LIG1-218ENST00000599322 ZNF148Q9UQR1 794 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms