RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 UGT1A5P35504 534 aa13.64□□□□□ -0.23
SCAF1-203ENST00000598359 ETF1P62495 437 aaKnown RBP13.64□□□□□ -0.23
SCAF1-203ENST00000598359 CXADRP78310 365 aa13.64□□□□□ -0.23
SCAF1-203ENST00000598359 TFDP3Q5H9I0 405 aa13.64□□□□□ -0.23
SCAF1-203ENST00000598359 PHF19Q5T6S3 580 aa13.64□□□□□ -0.23
SCAF1-203ENST00000598359 NKAIN2Q5VXU1 208 aa13.64□□□□□ -0.23
SCAF1-203ENST00000598359 C11orf63Q6NUN7 778 aa13.64□□□□□ -0.23
SCAF1-203ENST00000598359 CHST15Q7LFX5 561 aaPredicted RBP13.64□□□□□ -0.23
SCAF1-203ENST00000598359 DAAM2Q86T65 1068 aa13.64□□□□□ -0.23
SCAF1-203ENST00000598359 JAMLQ86YT9 394 aa13.64□□□□□ -0.23
SCAF1-203ENST00000598359 ACRBPQ8NEB7 543 aa13.64□□□□□ -0.23
SCAF1-203ENST00000598359 KIF18AQ8NI77 898 aa13.64□□□□□ -0.23
SCAF1-203ENST00000598359 NUDT22Q9BRQ3 303 aa13.64□□□□□ -0.23
SCAF1-203ENST00000598359 SPATA16Q9BXB7 569 aa13.64□□□□□ -0.23
SCAF1-203ENST00000598359 STRADBQ9C0K7 418 aa13.64□□□□□ -0.23
SCAF1-203ENST00000598359 ZFYVE1Q9HBF4 777 aa13.64□□□□□ -0.23
SCAF1-203ENST00000598359 WDR70Q9NW82 654 aa13.64□□□□□ -0.23
SCAF1-203ENST00000598359 PISDQ9UG56 409 aa13.64□□□□□ -0.23
SCAF1-203ENST00000598359 KCNK6Q9Y257 313 aa13.64□□□□□ -0.23
SCAF1-203ENST00000598359 EPN1Q9Y6I3 576 aaPredicted RBP13.64□□□□□ -0.23
SCAF1-203ENST00000598359 ARHGEF17Q96PE2 2063 aaPredicted RBP13.63□□□□□ -0.23
SCAF1-203ENST00000598359 DYNC1I1O14576 645 aa13.63□□□□□ -0.23
SCAF1-203ENST00000598359 PYGLP06737 847 aa13.63□□□□□ -0.23
SCAF1-203ENST00000598359 ACP5P13686 325 aa13.63□□□□□ -0.23
SCAF1-203ENST00000598359 PNLIPP16233 465 aa13.63□□□□□ -0.23
SCAF1-203ENST00000598359 CCKBRP32239 447 aa13.63□□□□□ -0.23
SCAF1-203ENST00000598359 ETV5P41161 510 aa13.63□□□□□ -0.23
SCAF1-203ENST00000598359 CHRNA4P43681 627 aa13.63□□□□□ -0.23
SCAF1-203ENST00000598359 NR2C2P49116 596 aa13.63□□□□□ -0.23
SCAF1-203ENST00000598359 ZFP36L1Q07352 338 aaKnown RBP13.63□□□□□ -0.23
SCAF1-203ENST00000598359 BIRC2Q13490 618 aa13.63□□□□□ -0.23
SCAF1-203ENST00000598359 MAP9Q49MG5 647 aa13.63□□□□□ -0.23
SCAF1-203ENST00000598359 IGF2-ASQ6U949 168 aa13.63□□□□□ -0.23
SCAF1-203ENST00000598359 ZNF438Q7Z4V0 828 aa13.63□□□□□ -0.23
SCAF1-203ENST00000598359 ZNF605Q86T29 641 aa13.63□□□□□ -0.23
SCAF1-203ENST00000598359 SLITRK4Q8IW52 837 aa13.63□□□□□ -0.23
SCAF1-203ENST00000598359 RCOR2Q8IZ40 523 aa13.63□□□□□ -0.23
SCAF1-203ENST00000598359 ZNF567Q8N184 647 aa13.63□□□□□ -0.23
SCAF1-203ENST00000598359 SLC25A41Q8N5S1 370 aa13.63□□□□□ -0.23
SCAF1-203ENST00000598359 P3H4Q92791 437 aa13.63□□□□□ -0.23
SCAF1-203ENST00000598359 TMEM74Q96NL1 305 aa13.63□□□□□ -0.23
SCAF1-203ENST00000598359 FAM118BQ9BPY3 351 aa13.63□□□□□ -0.23
SCAF1-203ENST00000598359 GPR63Q9BZJ6 419 aa13.63□□□□□ -0.23
SCAF1-203ENST00000598359 LACRTQ9GZZ8 138 aa13.63□□□□□ -0.23
SCAF1-203ENST00000598359 OR2AG1Q9H205 316 aa13.63□□□□□ -0.23
SCAF1-203ENST00000598359 BPIFA1Q9NP55 256 aa13.63□□□□□ -0.23
SCAF1-203ENST00000598359 KLHL8Q9P2G9 620 aaPredicted RBP13.63□□□□□ -0.23
SCAF1-203ENST00000598359 LOXL2Q9Y4K0 774 aa13.63□□□□□ -0.23
SCAF1-203ENST00000598359 PTPRQQ9UMZ3 2332 aa13.63□□□□□ -0.23
SCAF1-203ENST00000598359 CTIFO43310 598 aaKnown RBP13.62□□□□□ -0.23
SCAF1-203ENST00000598359 SNX2O60749 519 aa13.62□□□□□ -0.23
SCAF1-203ENST00000598359 MTX2O75431 263 aa13.62□□□□□ -0.23
SCAF1-203ENST00000598359 NDST3O95803 873 aa13.62□□□□□ -0.23
SCAF1-203ENST00000598359 ZNF8P17098 575 aaPredicted RBP13.62□□□□□ -0.23
SCAF1-203ENST00000598359 BPIP17213 487 aa13.62□□□□□ -0.23
SCAF1-203ENST00000598359 MPSTP25325 297 aa13.62□□□□□ -0.23
SCAF1-203ENST00000598359 CD1CP29017 333 aa13.62□□□□□ -0.23
SCAF1-203ENST00000598359 SLC5A2P31639 672 aa13.62□□□□□ -0.23
SCAF1-203ENST00000598359 NAP1L1P55209 391 aaKnown RBP13.62□□□□□ -0.23
SCAF1-203ENST00000598359 WNT3AP56704 352 aa13.62□□□□□ -0.23
SCAF1-203ENST00000598359 C16orf72Q14CZ0 275 aa13.62□□□□□ -0.23
SCAF1-203ENST00000598359 AADACL2Q6P093 401 aa13.62□□□□□ -0.23
SCAF1-203ENST00000598359 KDELC1Q6UW63 502 aa13.62□□□□□ -0.23
SCAF1-203ENST00000598359 ZNF574Q6ZN55 896 aaPredicted RBP13.62□□□□□ -0.23
SCAF1-203ENST00000598359 ZNF662Q6ZS27 426 aa13.62□□□□□ -0.23
SCAF1-203ENST00000598359 BZW1Q7L1Q6 419 aaKnown RBP13.62□□□□□ -0.23
SCAF1-203ENST00000598359 TMC3Q7Z5M5 1100 aa13.62□□□□□ -0.23
SCAF1-203ENST00000598359 CLEC14AQ86T13 490 aa13.62□□□□□ -0.23
SCAF1-203ENST00000598359 RCBTB1Q8NDN9 531 aa13.62□□□□□ -0.23
SCAF1-203ENST00000598359 SLC37A2Q8TED4 501 aa13.62□□□□□ -0.23
SCAF1-203ENST00000598359 OXNAD1Q96HP4 312 aaPredicted RBP13.62□□□□□ -0.23
SCAF1-203ENST00000598359 RBM41Q96IZ5 413 aaKnown RBP13.62□□□□□ -0.23
SCAF1-203ENST00000598359 QKIQ96PU8 341 aaKnown RBP eCLIP13.62□□□□□ -0.23
SCAF1-203ENST00000598359 L2HGDHQ9H9P8 463 aa13.62□□□□□ -0.23
SCAF1-203ENST00000598359 MAGEE1Q9HCI5 957 aa13.62□□□□□ -0.23
SCAF1-203ENST00000598359 TMEM9Q9P0T7 183 aa13.62□□□□□ -0.23
SCAF1-203ENST00000598359 VPS18Q9P253 973 aa13.62□□□□□ -0.23
SCAF1-203ENST00000598359 ATXN10Q9UBB4 475 aa13.62□□□□□ -0.23
SCAF1-203ENST00000598359 TBC1D29Q9UFV1 150 aa13.62□□□□□ -0.23
SCAF1-203ENST00000598359 A0A0U1RQJ8 604 aa13.61□□□□□ -0.23
SCAF1-203ENST00000598359 RGSL1A5PLK6 1076 aa13.61□□□□□ -0.23
SCAF1-203ENST00000598359 H7C0C1 242 aa13.61□□□□□ -0.23
SCAF1-203ENST00000598359 BUD23O43709 281 aaKnown RBP13.61□□□□□ -0.23
SCAF1-203ENST00000598359 SLC25A14O95258 325 aaPredicted RBP13.61□□□□□ -0.23
SCAF1-203ENST00000598359 CPNE6O95741 557 aa13.61□□□□□ -0.23
SCAF1-203ENST00000598359 ITGA2BP08514 1039 aa13.61□□□□□ -0.23
SCAF1-203ENST00000598359 JMJD7P0C870 316 aa13.61□□□□□ -0.23
SCAF1-203ENST00000598359 RBL1P28749 1068 aa13.61□□□□□ -0.23
SCAF1-203ENST00000598359 CSF2RBP32927 897 aa13.61□□□□□ -0.23
SCAF1-203ENST00000598359 ATP5OP48047 213 aa13.61□□□□□ -0.23
SCAF1-203ENST00000598359 MAPK10P53779 464 aa13.61□□□□□ -0.23
SCAF1-203ENST00000598359 CFHR1Q03591 330 aa13.61□□□□□ -0.23
SCAF1-203ENST00000598359 NR1D2Q14995 579 aa13.61□□□□□ -0.23
SCAF1-203ENST00000598359 PLA2G4EQ3MJ16 856 aa13.61□□□□□ -0.23
SCAF1-203ENST00000598359 KHDC1Q4VXA5 237 aaKnown RBP13.61□□□□□ -0.23
SCAF1-203ENST00000598359 SIRPB2Q5JXA9 342 aa13.61□□□□□ -0.23
SCAF1-203ENST00000598359 ZNF569Q5MCW4 686 aa13.61□□□□□ -0.23
SCAF1-203ENST00000598359 ARHGAP40Q5TG30 622 aa13.61□□□□□ -0.23
SCAF1-203ENST00000598359 CRTC3Q6UUV7 619 aa13.61□□□□□ -0.23
SCAF1-203ENST00000598359 BBS12Q6ZW61 710 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms