RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 GPR89BP0CG08 455 aa16.56■□□□□ 0.24
SSBP4-204ENST00000597724 TARDBPQ13148 414 aaKnown RBP eCLIP16.56■□□□□ 0.24
SSBP4-204ENST00000597724 PTPRCAPQ14761 206 aa16.56■□□□□ 0.24
SSBP4-204ENST00000597724 ZNF648Q5T619 568 aaPredicted RBP16.56■□□□□ 0.24
SSBP4-204ENST00000597724 CDCP2Q5VXM1 449 aa16.56■□□□□ 0.24
SSBP4-204ENST00000597724 SLC30A9Q6PML9 568 aa16.56■□□□□ 0.24
SSBP4-204ENST00000597724 ADGRG6Q86SQ4 1221 aa16.56■□□□□ 0.24
SSBP4-204ENST00000597724 SLC35F6Q8N357 371 aa16.56■□□□□ 0.24
SSBP4-204ENST00000597724 TAB3Q8N5C8 712 aaPredicted RBP16.56■□□□□ 0.24
SSBP4-204ENST00000597724 PDCD7Q8N8D1 485 aaKnown RBP16.56■□□□□ 0.24
SSBP4-204ENST00000597724 MAPK15Q8TD08 544 aa16.56■□□□□ 0.24
SSBP4-204ENST00000597724 ABCG4Q9H172 646 aa16.56■□□□□ 0.24
SSBP4-204ENST00000597724 OR2AG1Q9H205 316 aa16.56■□□□□ 0.24
SSBP4-204ENST00000597724 ETNK1Q9HBU6 452 aa16.56■□□□□ 0.24
SSBP4-204ENST00000597724 PRKAB1Q9Y478 270 aa16.56■□□□□ 0.24
SSBP4-204ENST00000597724 KCTD3Q9Y597 815 aa16.56■□□□□ 0.24
SSBP4-204ENST00000597724 EPG5Q9HCE0 2579 aa16.56■□□□□ 0.24
SSBP4-204ENST00000597724 MAP1BP46821 2468 aaKnown RBP16.56■□□□□ 0.24
SSBP4-204ENST00000597724 MYLKQ15746 1914 aa16.55■□□□□ 0.24
SSBP4-204ENST00000597724 GLYATL1P3A0A0U1RQE8 302 aa16.55■□□□□ 0.24
SSBP4-204ENST00000597724 ERI2A8K979 691 aaKnown RBP16.55■□□□□ 0.24
SSBP4-204ENST00000597724 B4DGG1 531 aa16.55■□□□□ 0.24
SSBP4-204ENST00000597724 GRID2O43424 1007 aa16.55■□□□□ 0.24
SSBP4-204ENST00000597724 UGT1A9O60656 530 aa16.55■□□□□ 0.24
SSBP4-204ENST00000597724 CRTAMO95727 393 aa16.55■□□□□ 0.24
SSBP4-204ENST00000597724 ETS1P14921 441 aa16.55■□□□□ 0.24
SSBP4-204ENST00000597724 ZNF8P17098 575 aaPredicted RBP16.55■□□□□ 0.24
SSBP4-204ENST00000597724 UGT1A6P19224 532 aa16.55■□□□□ 0.24
SSBP4-204ENST00000597724 UGT1A1P22309 533 aa16.55■□□□□ 0.24
SSBP4-204ENST00000597724 UGT1A4P22310 534 aa16.55■□□□□ 0.24
SSBP4-204ENST00000597724 UGT1A3P35503 534 aa16.55■□□□□ 0.24
SSBP4-204ENST00000597724 UGT1A5P35504 534 aa16.55■□□□□ 0.24
SSBP4-204ENST00000597724 ACTN2P35609 894 aa16.55■□□□□ 0.24
SSBP4-204ENST00000597724 FDFT1P37268 417 aa16.55■□□□□ 0.24
SSBP4-204ENST00000597724 ACTR1BP42025 376 aa16.55■□□□□ 0.24
SSBP4-204ENST00000597724 ACTR1AP61163 376 aa16.55■□□□□ 0.24
SSBP4-204ENST00000597724 PDE1BQ01064 536 aa16.55■□□□□ 0.24
SSBP4-204ENST00000597724 PEX6Q13608 980 aa16.55■□□□□ 0.24
SSBP4-204ENST00000597724 HLTFQ14527 1009 aaKnown RBP eCLIP16.55■□□□□ 0.24
SSBP4-204ENST00000597724 GSE1Q14687 1217 aa16.55■□□□□ 0.24
SSBP4-204ENST00000597724 CHRNA6Q15825 494 aa16.55■□□□□ 0.24
SSBP4-204ENST00000597724 C14orf28Q4W4Y0 310 aa16.55■□□□□ 0.24
SSBP4-204ENST00000597724 FAM151BQ6UXP7 276 aa16.55■□□□□ 0.24
SSBP4-204ENST00000597724 CHST15Q7LFX5 561 aaPredicted RBP16.55■□□□□ 0.24
SSBP4-204ENST00000597724 C17orf82Q86X59 251 aaPredicted RBP16.55■□□□□ 0.24
SSBP4-204ENST00000597724 RASGEF1CQ8N431 466 aa16.55■□□□□ 0.24
SSBP4-204ENST00000597724 DCBLD1Q8N8Z6 715 aa16.55■□□□□ 0.24
SSBP4-204ENST00000597724 GLIS1Q8NBF1 620 aa16.55■□□□□ 0.24
SSBP4-204ENST00000597724 OR4K2Q8NGD2 314 aa16.55■□□□□ 0.24
SSBP4-204ENST00000597724 ZDHHC1Q8WTX9 485 aa16.55■□□□□ 0.24
SSBP4-204ENST00000597724 PBKQ96KB5 322 aa16.55■□□□□ 0.24
SSBP4-204ENST00000597724 C19orf43Q9BQ61 176 aa16.55■□□□□ 0.24
SSBP4-204ENST00000597724 CCDC3Q9BQI4 270 aa16.55■□□□□ 0.24
SSBP4-204ENST00000597724 UGT1A7Q9HAW7 530 aa16.55■□□□□ 0.24
SSBP4-204ENST00000597724 UGT1A10Q9HAW8 530 aa16.55■□□□□ 0.24
SSBP4-204ENST00000597724 UGT1A8Q9HAW9 530 aa16.55■□□□□ 0.24
SSBP4-204ENST00000597724 HOMER3Q9NSC5 361 aa16.55■□□□□ 0.24
SSBP4-204ENST00000597724 CLCA2Q9UQC9 943 aa16.55■□□□□ 0.24
SSBP4-204ENST00000597724 WDFY3Q8IZQ1 3526 aa16.55■□□□□ 0.24
SSBP4-204ENST00000597724 CHUKO15111 745 aa16.54■□□□□ 0.24
SSBP4-204ENST00000597724 LDB2O43679 373 aa16.54■□□□□ 0.24
SSBP4-204ENST00000597724 VEGFDO43915 354 aa16.54■□□□□ 0.24
SSBP4-204ENST00000597724 KIF5CO60282 957 aa16.54■□□□□ 0.24
SSBP4-204ENST00000597724 MT-CO3P00414 261 aa16.54■□□□□ 0.24
SSBP4-204ENST00000597724 GLB1P16278 677 aa16.54■□□□□ 0.24
SSBP4-204ENST00000597724 ITGA9Q13797 1035 aa16.54■□□□□ 0.24
SSBP4-204ENST00000597724 KHDC1Q4VXA5 237 aaKnown RBP16.54■□□□□ 0.24
SSBP4-204ENST00000597724 CERCAMQ5T4B2 595 aa16.54■□□□□ 0.24
SSBP4-204ENST00000597724 PRUNE1Q86TP1 453 aa16.54■□□□□ 0.24
SSBP4-204ENST00000597724 LINC00523Q86TU6 105 aa16.54■□□□□ 0.24
SSBP4-204ENST00000597724 NAGSQ8N159 534 aa16.54■□□□□ 0.24
SSBP4-204ENST00000597724 PRELID2Q8N945 189 aa16.54■□□□□ 0.24
SSBP4-204ENST00000597724 CCDC89Q8N998 374 aa16.54■□□□□ 0.24
SSBP4-204ENST00000597724 OR13C4Q8NGS5 318 aa16.54■□□□□ 0.24
SSBP4-204ENST00000597724 CCDC74AQ96AQ1 378 aa16.54■□□□□ 0.24
SSBP4-204ENST00000597724 PAK5Q9P286 719 aa16.54■□□□□ 0.24
SSBP4-204ENST00000597724 RABGEF1Q9UJ41 708 aa16.54■□□□□ 0.24
SSBP4-204ENST00000597724 APPL1Q9UKG1 709 aa16.54■□□□□ 0.24
SSBP4-204ENST00000597724 TTC7AQ9ULT0 858 aaPredicted RBP16.54■□□□□ 0.24
SSBP4-204ENST00000597724 ZFC3H1O60293 1989 aaKnown RBP16.54■□□□□ 0.24
SSBP4-204ENST00000597724 TRABD2BA6NFA1 517 aa16.53■□□□□ 0.24
SSBP4-204ENST00000597724 USP27XA6NNY8 438 aa16.53■□□□□ 0.24
SSBP4-204ENST00000597724 ZZEF1O43149 2961 aa16.53■□□□□ 0.24
SSBP4-204ENST00000597724 NUDT21O43809 227 aaKnown RBP16.53■□□□□ 0.24
SSBP4-204ENST00000597724 MTX2O75431 263 aa16.53■□□□□ 0.24
SSBP4-204ENST00000597724 SUN1O94901 812 aa16.53■□□□□ 0.24
SSBP4-204ENST00000597724 CDK14O94921 469 aa16.53■□□□□ 0.24
SSBP4-204ENST00000597724 ECEL1O95672 775 aa16.53■□□□□ 0.24
SSBP4-204ENST00000597724 CAPNS1P04632 268 aa16.53■□□□□ 0.24
SSBP4-204ENST00000597724 PROS1P07225 676 aa16.53■□□□□ 0.24
SSBP4-204ENST00000597724 PNLIPP16233 465 aa16.53■□□□□ 0.24
SSBP4-204ENST00000597724 TPH1P17752 444 aa16.53■□□□□ 0.24
SSBP4-204ENST00000597724 MSNP26038 577 aaKnown RBP16.53■□□□□ 0.24
SSBP4-204ENST00000597724 RPL22P35268 128 aaKnown RBP16.53■□□□□ 0.24
SSBP4-204ENST00000597724 KCNJ1P48048 391 aa16.53■□□□□ 0.24
SSBP4-204ENST00000597724 ZNF140P52738 457 aaPredicted RBP16.53■□□□□ 0.24
SSBP4-204ENST00000597724 XIAPP98170 497 aa16.53■□□□□ 0.24
SSBP4-204ENST00000597724 TMEM115Q12893 351 aaPredicted RBP16.53■□□□□ 0.24
SSBP4-204ENST00000597724 SEMA5AQ13591 1074 aa16.53■□□□□ 0.24
SSBP4-204ENST00000597724 WDR48Q8TAF3 677 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms