RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 DR1Q01658 176 aa19.48■□□□□ 0.71
SHKBP1-214ENST00000597396 TRIP6Q15654 476 aaKnown RBP19.48■□□□□ 0.71
SHKBP1-214ENST00000597396 DEFB133Q30KQ1 61 aa19.48■□□□□ 0.71
SHKBP1-214ENST00000597396 SYDE1Q6ZW31 735 aaPredicted RBP19.48■□□□□ 0.71
SHKBP1-214ENST00000597396 GALNT13Q8IUC8 556 aa19.48■□□□□ 0.71
SHKBP1-214ENST00000597396 PPHLN1Q8NEY8 458 aaKnown RBP19.48■□□□□ 0.71
SHKBP1-214ENST00000597396 BAHD1Q8TBE0 780 aaPredicted RBP19.48■□□□□ 0.71
SHKBP1-214ENST00000597396 ZNF398Q8TD17 642 aa19.48■□□□□ 0.71
SHKBP1-214ENST00000597396 CPT1BQ92523 772 aa19.48■□□□□ 0.71
SHKBP1-214ENST00000597396 CNDP2Q96KP4 475 aaKnown RBP19.48■□□□□ 0.71
SHKBP1-214ENST00000597396 RANBP9Q96S59 729 aa19.48■□□□□ 0.71
SHKBP1-214ENST00000597396 KRT12Q99456 494 aa19.48■□□□□ 0.71
SHKBP1-214ENST00000597396 CLPBQ9H078 707 aa19.48■□□□□ 0.71
SHKBP1-214ENST00000597396 TMEM168Q9H0V1 697 aa19.48■□□□□ 0.71
SHKBP1-214ENST00000597396 ASB8Q9H765 288 aa19.48■□□□□ 0.71
SHKBP1-214ENST00000597396 UGT1A7Q9HAW7 530 aa19.48■□□□□ 0.71
SHKBP1-214ENST00000597396 UGT1A10Q9HAW8 530 aa19.48■□□□□ 0.71
SHKBP1-214ENST00000597396 UGT1A8Q9HAW9 530 aa19.48■□□□□ 0.71
SHKBP1-214ENST00000597396 TRIM39Q9HCM9 518 aa19.48■□□□□ 0.71
SHKBP1-214ENST00000597396 BFARQ9NZS9 450 aa19.48■□□□□ 0.71
SHKBP1-214ENST00000597396 GPSM3Q9Y4H4 160 aa19.48■□□□□ 0.71
SHKBP1-214ENST00000597396 SLC30A1Q9Y6M5 507 aa19.48■□□□□ 0.71
SHKBP1-214ENST00000597396 LMO7DNF2Z398 122 aa19.47■□□□□ 0.71
SHKBP1-214ENST00000597396 CCL22O00626 93 aa19.47■□□□□ 0.71
SHKBP1-214ENST00000597396 TRIM38O00635 465 aa19.47■□□□□ 0.71
SHKBP1-214ENST00000597396 GAPDHSO14556 408 aaPredicted RBP19.47■□□□□ 0.71
SHKBP1-214ENST00000597396 SIGLEC6O43699 453 aa19.47■□□□□ 0.71
SHKBP1-214ENST00000597396 SRP72O76094 671 aaKnown RBP19.47■□□□□ 0.71
SHKBP1-214ENST00000597396 URI1O94763 535 aaPredicted RBP19.47■□□□□ 0.71
SHKBP1-214ENST00000597396 CELA2BP08218 269 aaPredicted RBP19.47■□□□□ 0.71
SHKBP1-214ENST00000597396 ITGALP20701 1170 aa19.47■□□□□ 0.71
SHKBP1-214ENST00000597396 NPY2RP49146 381 aa19.47■□□□□ 0.71
SHKBP1-214ENST00000597396 SKIDA1Q1XH10 827 aa19.47■□□□□ 0.71
SHKBP1-214ENST00000597396 ZNF648Q5T619 568 aaPredicted RBP19.47■□□□□ 0.71
SHKBP1-214ENST00000597396 N4BP2L1Q5TBK1 243 aaPredicted RBP19.47■□□□□ 0.71
SHKBP1-214ENST00000597396 ANKRD22Q5VYY1 191 aa19.47■□□□□ 0.71
SHKBP1-214ENST00000597396 LRRC8BQ6P9F7 803 aa19.47■□□□□ 0.71
SHKBP1-214ENST00000597396 TAF8Q7Z7C8 310 aa19.47■□□□□ 0.71
SHKBP1-214ENST00000597396 SDR16C5Q8N3Y7 309 aa19.47■□□□□ 0.71
SHKBP1-214ENST00000597396 PTCD2Q8WV60 388 aaKnown RBP19.47■□□□□ 0.71
SHKBP1-214ENST00000597396 SCG3Q8WXD2 468 aaKnown RBP19.47■□□□□ 0.71
SHKBP1-214ENST00000597396 OR2M4Q96R27 311 aa19.47■□□□□ 0.71
SHKBP1-214ENST00000597396 OR2AG1Q9H205 316 aa19.47■□□□□ 0.71
SHKBP1-214ENST00000597396 RMI1Q9H9A7 625 aa19.47■□□□□ 0.71
SHKBP1-214ENST00000597396 ATXN10Q9UBB4 475 aa19.47■□□□□ 0.71
SHKBP1-214ENST00000597396 ZNHIT2Q9UHR6 403 aa19.47■□□□□ 0.71
SHKBP1-214ENST00000597396 TCAF1Q9Y4C2 921 aa19.47■□□□□ 0.71
SHKBP1-214ENST00000597396 PIKFYVEQ9Y2I7 2098 aa19.47■□□□□ 0.71
SHKBP1-214ENST00000597396 SPAARA0A1B0GVQ0 90 aa19.46■□□□□ 0.71
SHKBP1-214ENST00000597396 MROH6A6NGR9 719 aa19.46■□□□□ 0.71
SHKBP1-214ENST00000597396 TPP1O14773 563 aa19.46■□□□□ 0.71
SHKBP1-214ENST00000597396 GPR39O43194 453 aa19.46■□□□□ 0.71
SHKBP1-214ENST00000597396 MTX2O75431 263 aa19.46■□□□□ 0.71
SHKBP1-214ENST00000597396 TMEM63AO94886 807 aa19.46■□□□□ 0.71
SHKBP1-214ENST00000597396 FUCA1P04066 466 aa19.46■□□□□ 0.71
SHKBP1-214ENST00000597396 GIMD1P0DJR0 217 aa19.46■□□□□ 0.71
SHKBP1-214ENST00000597396 MC4RP32245 332 aa19.46■□□□□ 0.71
SHKBP1-214ENST00000597396 SIM1P81133 766 aaPredicted RBP19.46■□□□□ 0.71
SHKBP1-214ENST00000597396 XIAPP98170 497 aa19.46■□□□□ 0.71
SHKBP1-214ENST00000597396 CKAP4Q07065 602 aaKnown RBP19.46■□□□□ 0.71
SHKBP1-214ENST00000597396 C2orf54Q08AI8 447 aa19.46■□□□□ 0.71
SHKBP1-214ENST00000597396 ILF3Q12906 894 aaKnown RBP eCLIP19.46■□□□□ 0.71
SHKBP1-214ENST00000597396 PEX6Q13608 980 aa19.46■□□□□ 0.71
SHKBP1-214ENST00000597396 GTF2H3Q13889 308 aa19.46■□□□□ 0.71
SHKBP1-214ENST00000597396 DHX34Q14147 1143 aaKnown RBP19.46■□□□□ 0.71
SHKBP1-214ENST00000597396 PCID2Q5JVF3 399 aa19.46■□□□□ 0.71
SHKBP1-214ENST00000597396 LDLRAP1Q5SW96 308 aa19.46■□□□□ 0.71
SHKBP1-214ENST00000597396 TSTD2Q5T7W7 516 aa19.46■□□□□ 0.71
SHKBP1-214ENST00000597396 NLRP9Q7RTR0 991 aa19.46■□□□□ 0.71
SHKBP1-214ENST00000597396 JAMLQ86YT9 394 aa19.46■□□□□ 0.71
SHKBP1-214ENST00000597396 PPIL6Q8IXY8 311 aa19.46■□□□□ 0.71
SHKBP1-214ENST00000597396 SPATA4Q8NEY3 305 aa19.46■□□□□ 0.71
SHKBP1-214ENST00000597396 SCARF2Q96GP6 870 aaPredicted RBP19.46■□□□□ 0.71
SHKBP1-214ENST00000597396 TTC25Q96NG3 672 aa19.46■□□□□ 0.71
SHKBP1-214ENST00000597396 GSDMCQ9BYG8 508 aa19.46■□□□□ 0.71
SHKBP1-214ENST00000597396 ZCCHC2Q9C0B9 1178 aaKnown RBP19.46■□□□□ 0.71
SHKBP1-214ENST00000597396 IL22Q9GZX6 179 aa19.46■□□□□ 0.71
SHKBP1-214ENST00000597396 SMOXQ9NWM0 555 aa19.46■□□□□ 0.71
SHKBP1-214ENST00000597396 TRNAU1APQ9NX07 287 aaKnown RBP19.46■□□□□ 0.71
SHKBP1-214ENST00000597396 CRLS1Q9UJA2 301 aa19.46■□□□□ 0.71
SHKBP1-214ENST00000597396 CDC23Q9UJX2 597 aa19.46■□□□□ 0.71
SHKBP1-214ENST00000597396 ANGPTL2Q9UKU9 493 aa19.46■□□□□ 0.71
SHKBP1-214ENST00000597396 TMPRSS11EQ9UL52 423 aa19.46■□□□□ 0.71
SHKBP1-214ENST00000597396 GOLGA8MH3BSY2 632 aa19.45■□□□□ 0.7
SHKBP1-214ENST00000597396 DNALI1O14645 258 aaPredicted RBP19.45■□□□□ 0.7
SHKBP1-214ENST00000597396 YY2O15391 372 aa19.45■□□□□ 0.7
SHKBP1-214ENST00000597396 TTI1O43156 1089 aa19.45■□□□□ 0.7
SHKBP1-214ENST00000597396 TNFSF14O43557 240 aa19.45■□□□□ 0.7
SHKBP1-214ENST00000597396 VEGFDO43915 354 aa19.45■□□□□ 0.7
SHKBP1-214ENST00000597396 DNAJC6O75061 913 aa19.45■□□□□ 0.7
SHKBP1-214ENST00000597396 MGAT1P26572 445 aa19.45■□□□□ 0.7
SHKBP1-214ENST00000597396 AKT1P31749 480 aa19.45■□□□□ 0.7
SHKBP1-214ENST00000597396 DAB2P98082 770 aa19.45■□□□□ 0.7
SHKBP1-214ENST00000597396 NFATC2Q13469 925 aa19.45■□□□□ 0.7
SHKBP1-214ENST00000597396 PYCR3Q53H96 274 aa19.45■□□□□ 0.7
SHKBP1-214ENST00000597396 ZRANB3Q5FWF4 1079 aa19.45■□□□□ 0.7
SHKBP1-214ENST00000597396 GPRC6AQ5T6X5 926 aa19.45■□□□□ 0.7
SHKBP1-214ENST00000597396 ZCCHC8Q6NZY4 707 aaKnown RBP19.45■□□□□ 0.7
SHKBP1-214ENST00000597396 ZNF534Q76KX8 674 aa19.45■□□□□ 0.7
SHKBP1-214ENST00000597396 PCGF5Q86SE9 256 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms