RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, human

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHKBP1-208	ENST00000595726	IYD	Q6PHW0	289 aa		13.61	□□□□□ -0.23
SHKBP1-208	ENST00000595726	STRADA	Q7RTN6	431 aa		13.61	□□□□□ -0.23
SHKBP1-208	ENST00000595726	MCOLN2	Q8IZK6	566 aa		13.61	□□□□□ -0.23
SHKBP1-208	ENST00000595726	SLC34A3	Q8N130	599 aa		13.61	□□□□□ -0.23
SHKBP1-208	ENST00000595726	UMODL1-AS1	Q8N2C9	162 aa		13.61	□□□□□ -0.23
SHKBP1-208	ENST00000595726	CBARP	Q8N350	705 aa	Predicted RBP	13.61	□□□□□ -0.23
SHKBP1-208	ENST00000595726	CISD2	Q8N5K1	135 aa	Known RBP	13.61	□□□□□ -0.23
SHKBP1-208	ENST00000595726	CENPI	Q92674	756 aa	Predicted RBP	13.61	□□□□□ -0.23
SHKBP1-208	ENST00000595726	C9orf72	Q96LT7	481 aa		13.61	□□□□□ -0.23
SHKBP1-208	ENST00000595726	HAUS4	Q9H6D7	363 aa		13.61	□□□□□ -0.23
SHKBP1-208	ENST00000595726	SARS2	Q9NP81	518 aa	Known RBP	13.61	□□□□□ -0.23
SHKBP1-208	ENST00000595726	LHX9	Q9NQ69	397 aa		13.61	□□□□□ -0.23
SHKBP1-208	ENST00000595726	OGFR	Q9NZT2	677 aa		13.61	□□□□□ -0.23
SHKBP1-208	ENST00000595726	CD84	Q9UIB8	345 aa		13.61	□□□□□ -0.23
SHKBP1-208	ENST00000595726	ZNF451	Q9Y4E5	1061 aa		13.61	□□□□□ -0.23
SHKBP1-208	ENST00000595726		A6NL46	340 aa		13.6	□□□□□ -0.23
SHKBP1-208	ENST00000595726	SIGLEC16	A6NMB1	481 aa		13.6	□□□□□ -0.23
SHKBP1-208	ENST00000595726	WASH4P	A8MWX3	477 aa		13.6	□□□□□ -0.23
SHKBP1-208	ENST00000595726	KIF1C	O43896	1103 aa	Known RBP	13.6	□□□□□ -0.23
SHKBP1-208	ENST00000595726	SNX2	O60749	519 aa		13.6	□□□□□ -0.23
SHKBP1-208	ENST00000595726	PALM	O75781	387 aa		13.6	□□□□□ -0.23
SHKBP1-208	ENST00000595726	SOD1	P00441	154 aa		13.6	□□□□□ -0.23
SHKBP1-208	ENST00000595726	GPD1	P21695	349 aa		13.6	□□□□□ -0.23
SHKBP1-208	ENST00000595726	LHCGR	P22888	699 aa		13.6	□□□□□ -0.23
SHKBP1-208	ENST00000595726	PAPOLA	P51003	745 aa	Known RBP	13.6	□□□□□ -0.23
SHKBP1-208	ENST00000595726	SCNN1B	P51168	640 aa		13.6	□□□□□ -0.23
SHKBP1-208	ENST00000595726	IL10RA	Q13651	578 aa		13.6	□□□□□ -0.23
SHKBP1-208	ENST00000595726	NAA30	Q147X3	362 aa	Predicted RBP	13.6	□□□□□ -0.23
SHKBP1-208	ENST00000595726	CHRNA6	Q15825	494 aa		13.6	□□□□□ -0.23
SHKBP1-208	ENST00000595726	UGT8	Q16880	541 aa		13.6	□□□□□ -0.23
SHKBP1-208	ENST00000595726	ZRANB3	Q5FWF4	1079 aa		13.6	□□□□□ -0.23
SHKBP1-208	ENST00000595726	PPP1R15B	Q5SWA1	713 aa		13.6	□□□□□ -0.23
SHKBP1-208	ENST00000595726	SP5	Q6BEB4	398 aa	Predicted RBP	13.6	□□□□□ -0.23
SHKBP1-208	ENST00000595726	WDR59	Q6PJI9	974 aa		13.6	□□□□□ -0.23
SHKBP1-208	ENST00000595726	CHST15	Q7LFX5	561 aa	Predicted RBP	13.6	□□□□□ -0.23
SHKBP1-208	ENST00000595726	ZNF571	Q7Z3V5	609 aa	Predicted RBP	13.6	□□□□□ -0.23
SHKBP1-208	ENST00000595726	SLFN11	Q7Z7L1	901 aa		13.6	□□□□□ -0.23
SHKBP1-208	ENST00000595726	PLXDC1	Q8IUK5	500 aa		13.6	□□□□□ -0.23
SHKBP1-208	ENST00000595726	MCEMP1	Q8IX19	187 aa		13.6	□□□□□ -0.23
SHKBP1-208	ENST00000595726	FAM172A	Q8WUF8	416 aa		13.6	□□□□□ -0.23
SHKBP1-208	ENST00000595726	MCEE	Q96PE7	176 aa		13.6	□□□□□ -0.23
SHKBP1-208	ENST00000595726	TGM7	Q96PF1	710 aa		13.6	□□□□□ -0.23
SHKBP1-208	ENST00000595726	NUDT9	Q9BW91	350 aa		13.6	□□□□□ -0.23
SHKBP1-208	ENST00000595726	SLC39A8	Q9C0K1	460 aa		13.6	□□□□□ -0.23
SHKBP1-208	ENST00000595726	LRRC19	Q9H756	370 aa		13.6	□□□□□ -0.23
SHKBP1-208	ENST00000595726	ZNHIT2	Q9UHR6	403 aa		13.6	□□□□□ -0.23
SHKBP1-208	ENST00000595726	PCDHGC4	Q9Y5F7	938 aa		13.6	□□□□□ -0.23
SHKBP1-208	ENST00000595726	DNHD1	Q96M86	4753 aa		13.6	□□□□□ -0.23
SHKBP1-208	ENST00000595726	CROCC	Q5TZA2	2017 aa		13.59	□□□□□ -0.23
SHKBP1-208	ENST00000595726		A0A1W2PQJ5	194 aa		13.59	□□□□□ -0.23
SHKBP1-208	ENST00000595726	ANKUB1	A6NFN9	424 aa		13.59	□□□□□ -0.23
SHKBP1-208	ENST00000595726	TMCO5B	A8MYB1	307 aa		13.59	□□□□□ -0.23
SHKBP1-208	ENST00000595726	CCP110	O43303	1012 aa		13.59	□□□□□ -0.23
SHKBP1-208	ENST00000595726	LRCH4	O75427	683 aa		13.59	□□□□□ -0.23
SHKBP1-208	ENST00000595726	ANKRD34C	P0C6C1	535 aa		13.59	□□□□□ -0.23
SHKBP1-208	ENST00000595726	HNRNPH3	P31942	346 aa	Known RBP	13.59	□□□□□ -0.23
SHKBP1-208	ENST00000595726	VIPR1	P32241	457 aa		13.59	□□□□□ -0.23
SHKBP1-208	ENST00000595726	PTGIR	P43119	386 aa		13.59	□□□□□ -0.23
SHKBP1-208	ENST00000595726	GPR1	P46091	355 aa		13.59	□□□□□ -0.23
SHKBP1-208	ENST00000595726	RPL7A	P62424	266 aa	Known RBP	13.59	□□□□□ -0.23
SHKBP1-208	ENST00000595726	KLHL30	Q0D2K2	578 aa		13.59	□□□□□ -0.23
SHKBP1-208	ENST00000595726	IL11RA	Q14626	422 aa		13.59	□□□□□ -0.23
SHKBP1-208	ENST00000595726	PLEKHN1	Q494U1	663 aa	Predicted RBP	13.59	□□□□□ -0.23
SHKBP1-208	ENST00000595726	PPP1R2P3	Q6NXS1	205 aa		13.59	□□□□□ -0.23
SHKBP1-208	ENST00000595726	SCYL2	Q6P3W7	929 aa		13.59	□□□□□ -0.23
SHKBP1-208	ENST00000595726	TSPAN33	Q86UF1	283 aa		13.59	□□□□□ -0.23
SHKBP1-208	ENST00000595726	GALNT13	Q8IUC8	556 aa		13.59	□□□□□ -0.23
SHKBP1-208	ENST00000595726	FDCSP	Q8NFU4	85 aa		13.59	□□□□□ -0.23
SHKBP1-208	ENST00000595726	THAP4	Q8WY91	577 aa		13.59	□□□□□ -0.23
SHKBP1-208	ENST00000595726	SCAMP4	Q969E2	229 aa		13.59	□□□□□ -0.23
SHKBP1-208	ENST00000595726	AGAP2	Q99490	1192 aa		13.59	□□□□□ -0.23
SHKBP1-208	ENST00000595726	IFNK	Q9P0W0	207 aa		13.59	□□□□□ -0.23
SHKBP1-208	ENST00000595726	CNOT8	Q9UFF9	292 aa	Known RBP	13.59	□□□□□ -0.23
SHKBP1-208	ENST00000595726	KCNK6	Q9Y257	313 aa		13.59	□□□□□ -0.23
SHKBP1-208	ENST00000595726	MN1	Q10571	1320 aa	Predicted RBP	13.59	□□□□□ -0.23
SHKBP1-208	ENST00000595726	NPIPB15	A6NHN6	443 aa	Predicted RBP	13.58	□□□□□ -0.24
SHKBP1-208	ENST00000595726	C21orf140	B9A014	251 aa		13.58	□□□□□ -0.24
SHKBP1-208	ENST00000595726	DDX3X	O00571	662 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
SHKBP1-208	ENST00000595726	ZNF185	O15231	689 aa		13.58	□□□□□ -0.24
SHKBP1-208	ENST00000595726	ATMIN	O43313	823 aa	Predicted RBP	13.58	□□□□□ -0.24
SHKBP1-208	ENST00000595726	DPM1	O60762	260 aa		13.58	□□□□□ -0.24
SHKBP1-208	ENST00000595726	RASSF9	O75901	435 aa		13.58	□□□□□ -0.24
SHKBP1-208	ENST00000595726	ASMTL	O95671	621 aa		13.58	□□□□□ -0.24
SHKBP1-208	ENST00000595726	C9	P02748	559 aa		13.58	□□□□□ -0.24
SHKBP1-208	ENST00000595726	ATP1A1	P05023	1023 aa	Known RBP	13.58	□□□□□ -0.24
SHKBP1-208	ENST00000595726	FGF5	P12034	268 aa		13.58	□□□□□ -0.24
SHKBP1-208	ENST00000595726	PTPN4	P29074	926 aa		13.58	□□□□□ -0.24
SHKBP1-208	ENST00000595726	ZNF143	P52747	638 aa	Predicted RBP	13.58	□□□□□ -0.24
SHKBP1-208	ENST00000595726	EPHA4	P54764	986 aa		13.58	□□□□□ -0.24
SHKBP1-208	ENST00000595726	RAPSN	Q13702	412 aa		13.58	□□□□□ -0.24
SHKBP1-208	ENST00000595726	ARHGAP36	Q6ZRI8	547 aa		13.58	□□□□□ -0.24
SHKBP1-208	ENST00000595726	SLC9B2	Q86UD5	537 aa		13.58	□□□□□ -0.24
SHKBP1-208	ENST00000595726	NTAN1	Q96AB6	310 aa		13.58	□□□□□ -0.24
SHKBP1-208	ENST00000595726	PNPLA2	Q96AD5	504 aa		13.58	□□□□□ -0.24
SHKBP1-208	ENST00000595726	SH3KBP1	Q96B97	665 aa		13.58	□□□□□ -0.24
SHKBP1-208	ENST00000595726	SMIM14	Q96QK8	99 aa		13.58	□□□□□ -0.24
SHKBP1-208	ENST00000595726	CINP	Q9BW66	212 aa	Predicted RBP	13.58	□□□□□ -0.24
SHKBP1-208	ENST00000595726	BRD8	Q9H0E9	1235 aa		13.58	□□□□□ -0.24
SHKBP1-208	ENST00000595726	ABCG8	Q9H221	673 aa		13.58	□□□□□ -0.24
SHKBP1-208	ENST00000595726	CPNE7	Q9UBL6	633 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms