RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 SGSHP51688 502 aa15.31■□□□□ 0.04
PNKP-204ENST00000594661 RPS24P62847 133 aaKnown RBP15.31■□□□□ 0.04
PNKP-204ENST00000594661 INSCQ1MX18 579 aa15.31■□□□□ 0.04
PNKP-204ENST00000594661 WDR45BQ5MNZ6 344 aa15.31■□□□□ 0.04
PNKP-204ENST00000594661 MARC1Q5VT66 337 aa15.31■□□□□ 0.04
PNKP-204ENST00000594661 OR52K2Q8NGK3 314 aa15.31■□□□□ 0.04
PNKP-204ENST00000594661 ACDQ96AP0 544 aa15.31■□□□□ 0.04
PNKP-204ENST00000594661 C1orf50Q9BV19 199 aa15.31■□□□□ 0.04
PNKP-204ENST00000594661 NPLQ9BXD5 320 aaPredicted RBP15.31■□□□□ 0.04
PNKP-204ENST00000594661 SLC25A51Q9H1U9 297 aa15.31■□□□□ 0.04
PNKP-204ENST00000594661 ATXN3LQ9H3M9 355 aa15.31■□□□□ 0.04
PNKP-204ENST00000594661 RETREG1Q9H6L5 497 aa15.31■□□□□ 0.04
PNKP-204ENST00000594661 TMEM216Q9P0N5 145 aa15.31■□□□□ 0.04
PNKP-204ENST00000594661 PCDHB12Q9Y5F1 795 aa15.31■□□□□ 0.04
PNKP-204ENST00000594661 A0A0D9SEW6 157 aa15.31■□□□□ 0.04
PNKP-204ENST00000594661 TTC24A2A3L6 582 aaPredicted RBP15.31■□□□□ 0.04
PNKP-204ENST00000594661 CLOCKO15516 846 aa15.31■□□□□ 0.04
PNKP-204ENST00000594661 COX4I1P13073 169 aa15.31■□□□□ 0.04
PNKP-204ENST00000594661 CHRNA4P43681 627 aa15.31■□□□□ 0.04
PNKP-204ENST00000594661 TUBA1BP68363 451 aa15.31■□□□□ 0.04
PNKP-204ENST00000594661 FLOT2Q14254 428 aa15.31■□□□□ 0.04
PNKP-204ENST00000594661 IHHQ14623 411 aa15.31■□□□□ 0.04
PNKP-204ENST00000594661 POU6F1Q14863 301 aa15.31■□□□□ 0.04
PNKP-204ENST00000594661 PCSK7Q16549 785 aa15.31■□□□□ 0.04
PNKP-204ENST00000594661 MBLAC2Q68D91 279 aa15.31■□□□□ 0.04
PNKP-204ENST00000594661 KDELC1Q6UW63 502 aa15.31■□□□□ 0.04
PNKP-204ENST00000594661 TUBA1AQ71U36 451 aa15.31■□□□□ 0.04
PNKP-204ENST00000594661 PGBD5Q8N414 524 aa15.31■□□□□ 0.04
PNKP-204ENST00000594661 TEX26Q8N6G2 289 aa15.31■□□□□ 0.04
PNKP-204ENST00000594661 PDPRQ8NCN5 879 aa15.31■□□□□ 0.04
PNKP-204ENST00000594661 IMP4Q96G21 291 aaKnown RBP15.31■□□□□ 0.04
PNKP-204ENST00000594661 TMEM79Q9BSE2 394 aa15.31■□□□□ 0.04
PNKP-204ENST00000594661 KIFC1Q9BW19 673 aa15.31■□□□□ 0.04
PNKP-204ENST00000594661 KLF16Q9BXK1 252 aaPredicted RBP15.31■□□□□ 0.04
PNKP-204ENST00000594661 FSD1LQ9BXM9 530 aa15.31■□□□□ 0.04
PNKP-204ENST00000594661 RABL2AQ9UBK7 228 aaPredicted RBP15.31■□□□□ 0.04
PNKP-204ENST00000594661 GOLGA8CPA6NN73 597 aa15.3■□□□□ 0.04
PNKP-204ENST00000594661 H3BNC9 293 aa15.3■□□□□ 0.04
PNKP-204ENST00000594661 MMP2P08253 660 aa15.3■□□□□ 0.04
PNKP-204ENST00000594661 CNPP09543 421 aaKnown RBP15.3■□□□□ 0.04
PNKP-204ENST00000594661 FGF3P11487 239 aaPredicted RBP15.3■□□□□ 0.04
PNKP-204ENST00000594661 ETFBP38117 255 aa15.3■□□□□ 0.04
PNKP-204ENST00000594661 MAGEA12P43365 314 aa15.3■□□□□ 0.04
PNKP-204ENST00000594661 EPHB3P54753 998 aa15.3■□□□□ 0.04
PNKP-204ENST00000594661 WNT3AP56704 352 aa15.3■□□□□ 0.04
PNKP-204ENST00000594661 YBEYP58557 167 aaPredicted RBP15.3■□□□□ 0.04
PNKP-204ENST00000594661 DSC2Q02487 901 aa15.3■□□□□ 0.04
PNKP-204ENST00000594661 IL10RBQ08334 325 aa15.3■□□□□ 0.04
PNKP-204ENST00000594661 ITKQ08881 620 aa15.3■□□□□ 0.04
PNKP-204ENST00000594661 GRSF1Q12849 480 aaKnown RBP eCLIP15.3■□□□□ 0.04
PNKP-204ENST00000594661 PCLAFQ15004 111 aa15.3■□□□□ 0.04
PNKP-204ENST00000594661 PIWIL2Q8TC59 973 aaKnown RBP15.3■□□□□ 0.04
PNKP-204ENST00000594661 ISL2Q96A47 359 aa15.3■□□□□ 0.04
PNKP-204ENST00000594661 ERLEC1Q96DZ1 483 aa15.3■□□□□ 0.04
PNKP-204ENST00000594661 CNDP2Q96KP4 475 aaKnown RBP15.3■□□□□ 0.04
PNKP-204ENST00000594661 PPP1R2P1Q96PQ5 205 aa15.3■□□□□ 0.04
PNKP-204ENST00000594661 SLC22A12Q96S37 553 aa15.3■□□□□ 0.04
PNKP-204ENST00000594661 CYP2S1Q96SQ9 504 aa15.3■□□□□ 0.04
PNKP-204ENST00000594661 TMEM106CQ9BVX2 250 aa15.3■□□□□ 0.04
PNKP-204ENST00000594661 FAM96AQ9H5X1 160 aa15.3■□□□□ 0.04
PNKP-204ENST00000594661 CAB39LQ9H9S4 337 aa15.3■□□□□ 0.04
PNKP-204ENST00000594661 ZNF358Q9NW07 568 aa15.3■□□□□ 0.04
PNKP-204ENST00000594661 DNAJC28Q9NX36 388 aa15.3■□□□□ 0.04
PNKP-204ENST00000594661 SMPD4Q9NXE4 827 aa15.3■□□□□ 0.04
PNKP-204ENST00000594661 CXXC1Q9P0U4 656 aaPredicted RBP15.3■□□□□ 0.04
PNKP-204ENST00000594661 AGO1Q9UL18 857 aaKnown RBP15.3■□□□□ 0.04
PNKP-204ENST00000594661 PCDHGA11Q9Y5H2 935 aa15.3■□□□□ 0.04
PNKP-204ENST00000594661 PLXNA4Q9HCM2 1894 aa15.3■□□□□ 0.04
PNKP-204ENST00000594661 SLC22A1O15245 554 aa15.29■□□□□ 0.04
PNKP-204ENST00000594661 KLHL41O60662 606 aa15.29■□□□□ 0.04
PNKP-204ENST00000594661 GJB3O75712 270 aa15.29■□□□□ 0.04
PNKP-204ENST00000594661 MYO1DO94832 1006 aa15.29■□□□□ 0.04
PNKP-204ENST00000594661 PRKCGP05129 697 aa15.29■□□□□ 0.04
PNKP-204ENST00000594661 NELFEP18615 380 aaKnown RBP15.29■□□□□ 0.04
PNKP-204ENST00000594661 CD86P42081 329 aa15.29■□□□□ 0.04
PNKP-204ENST00000594661 CSE1LP55060 971 aaKnown RBP15.29■□□□□ 0.04
PNKP-204ENST00000594661 HTRA4P83105 476 aaPredicted RBP15.29■□□□□ 0.04
PNKP-204ENST00000594661 NFATC3Q12968 1075 aa15.29■□□□□ 0.04
PNKP-204ENST00000594661 PCID2Q5JVF3 399 aa15.29■□□□□ 0.04
PNKP-204ENST00000594661 PDPK2PQ6A1A2 396 aa15.29■□□□□ 0.04
PNKP-204ENST00000594661 RANBP10Q6VN20 620 aa15.29■□□□□ 0.04
PNKP-204ENST00000594661 C10orf107Q8IVU9 208 aa15.29■□□□□ 0.04
PNKP-204ENST00000594661 ENTPD7Q9NQZ7 604 aa15.29■□□□□ 0.04
PNKP-204ENST00000594661 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.29■□□□□ 0.04
PNKP-204ENST00000594661 CHD5Q8TDI0 1954 aa15.29■□□□□ 0.04
PNKP-204ENST00000594661 A0A096LPK6 155 aa15.29■□□□□ 0.04
PNKP-204ENST00000594661 CARNS1A5YM72 827 aa15.29■□□□□ 0.04
PNKP-204ENST00000594661 SCAMP3O14828 347 aaKnown RBP15.29■□□□□ 0.04
PNKP-204ENST00000594661 TGM5O43548 720 aa15.29■□□□□ 0.04
PNKP-204ENST00000594661 PRAMEF11O60813 436 aa15.29■□□□□ 0.04
PNKP-204ENST00000594661 JRKO75564 520 aa15.29■□□□□ 0.04
PNKP-204ENST00000594661 LYPLA1O75608 230 aaPredicted RBP15.29■□□□□ 0.04
PNKP-204ENST00000594661 F11P03951 625 aa15.29■□□□□ 0.04
PNKP-204ENST00000594661 CTSAP10619 480 aa15.29■□□□□ 0.04
PNKP-204ENST00000594661 SLC1A6P48664 564 aa15.29■□□□□ 0.04
PNKP-204ENST00000594661 GNA12Q03113 381 aa15.29■□□□□ 0.04
PNKP-204ENST00000594661 TNK2Q07912 1038 aa15.29■□□□□ 0.04
PNKP-204ENST00000594661 PKN3Q6P5Z2 889 aa15.29■□□□□ 0.04
PNKP-204ENST00000594661 PLD6Q8N2A8 252 aaKnown RBP15.29■□□□□ 0.04
PNKP-204ENST00000594661 TMCO5AQ8N6Q1 288 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms