RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 NXPE1Q8N323 547 aa15.07■□□□□ 0
VRK3-207ENST00000594092 SCAMP4Q969E2 229 aa15.07■□□□□ 0
VRK3-207ENST00000594092 CCDC97Q96F63 343 aaPredicted RBP15.07■□□□□ 0
VRK3-207ENST00000594092 COQ10AQ96MF6 247 aa15.07■□□□□ 0
VRK3-207ENST00000594092 TSNARE1Q96NA8 513 aa15.07■□□□□ 0
VRK3-207ENST00000594092 MKRN2Q9H000 416 aaKnown RBP15.07■□□□□ 0
VRK3-207ENST00000594092 CCDC68Q9H2F9 335 aa15.07■□□□□ 0
VRK3-207ENST00000594092 MANSC1Q9H8J5 431 aa15.07■□□□□ 0
VRK3-207ENST00000594092 FBRSQ9HAH7 460 aa15.07■□□□□ 0
VRK3-207ENST00000594092 CD248Q9HCU0 757 aa15.07■□□□□ 0
VRK3-207ENST00000594092 FADS3Q9Y5Q0 445 aa15.07■□□□□ 0
VRK3-207ENST00000594092 A0A087X1B8 175 aa15.06■□□□□ 0
VRK3-207ENST00000594092 EBAG9O00559 213 aa15.06■□□□□ 0
VRK3-207ENST00000594092 NEMP1O14524 444 aa15.06■□□□□ 0
VRK3-207ENST00000594092 DNAJC6O75061 913 aa15.06■□□□□ 0
VRK3-207ENST00000594092 WISP3O95389 354 aaPredicted RBP15.06■□□□□ 0
VRK3-207ENST00000594092 PKMP14618 531 aaKnown RBP15.06■□□□□ 0
VRK3-207ENST00000594092 ITGA9Q13797 1035 aa15.06■□□□□ 0
VRK3-207ENST00000594092 MLF2Q15773 248 aaPredicted RBP15.06■□□□□ 0
VRK3-207ENST00000594092 CCDC153Q494R4 210 aa15.06■□□□□ 0
VRK3-207ENST00000594092 CTSL3PQ5NE16 218 aa15.06■□□□□ 0
VRK3-207ENST00000594092 AGBL4Q5VU57 503 aa15.06■□□□□ 0
VRK3-207ENST00000594092 PIM3Q86V86 326 aa15.06■□□□□ 0
VRK3-207ENST00000594092 LCA5Q86VQ0 697 aa15.06■□□□□ 0
VRK3-207ENST00000594092 ADHFE1Q8IWW8 467 aa15.06■□□□□ 0
VRK3-207ENST00000594092 RAVER1Q8IY67 606 aaKnown RBP15.06■□□□□ 0
VRK3-207ENST00000594092 CENPLQ8N0S6 344 aaPredicted RBP15.06■□□□□ 0
VRK3-207ENST00000594092 RPLP0P6Q8NHW5 317 aa15.06■□□□□ 0
VRK3-207ENST00000594092 DTX3LQ8TDB6 740 aa15.06■□□□□ 0
VRK3-207ENST00000594092 TTC1Q99614 292 aa15.06■□□□□ 0
VRK3-207ENST00000594092 SPATA16Q9BXB7 569 aa15.06■□□□□ 0
VRK3-207ENST00000594092 PITPNM3Q9BZ71 974 aa15.06■□□□□ 0
VRK3-207ENST00000594092 CDH19Q9H159 772 aa15.06■□□□□ 0
VRK3-207ENST00000594092 P2RY12Q9H244 342 aa15.06■□□□□ 0
VRK3-207ENST00000594092 TMEM216Q9P0N5 145 aa15.06■□□□□ 0
VRK3-207ENST00000594092 SERGEFQ9UGK8 458 aa15.06■□□□□ 0
VRK3-207ENST00000594092 TMPRSS11EQ9UL52 423 aa15.06■□□□□ 0
VRK3-207ENST00000594092 MED16Q9Y2X0 877 aa15.06■□□□□ 0
VRK3-207ENST00000594092 MTF2Q9Y483 593 aaPredicted RBP15.06■□□□□ 0
VRK3-207ENST00000594092 PLXNA2O75051 1894 aa15.06■□□□□ 0
VRK3-207ENST00000594092 PRMT5O14744 637 aaPredicted RBP15.06■□□□□ 0
VRK3-207ENST00000594092 WNT9AO14904 365 aa15.06■□□□□ 0
VRK3-207ENST00000594092 BIRC5O15392 142 aa15.06■□□□□ 0
VRK3-207ENST00000594092 PLIN3O60664 434 aa15.06■□□□□ 0
VRK3-207ENST00000594092 ESR1P03372 595 aa15.06■□□□□ 0
VRK3-207ENST00000594092 COL6A2P12110 1019 aa15.06■□□□□ 0
VRK3-207ENST00000594092 ZNF7P17097 686 aaPredicted RBP15.06■□□□□ 0
VRK3-207ENST00000594092 DLG1Q12959 904 aa15.06■□□□□ 0
VRK3-207ENST00000594092 HENMT1Q5T8I9 393 aaKnown RBP15.06■□□□□ 0
VRK3-207ENST00000594092 PIGWQ7Z7B1 504 aa15.06■□□□□ 0
VRK3-207ENST00000594092 NRSN1Q8IZ57 195 aa15.06■□□□□ 0
VRK3-207ENST00000594092 CACNA2D3Q8IZS8 1091 aa15.06■□□□□ 0
VRK3-207ENST00000594092 RBFAQ8N0V3 343 aa15.06■□□□□ 0
VRK3-207ENST00000594092 HDDC3Q8N4P3 179 aa15.06■□□□□ 0
VRK3-207ENST00000594092 MAFAQ8NHW3 353 aaPredicted RBP15.06■□□□□ 0
VRK3-207ENST00000594092 KCTD4Q8WVF5 259 aa15.06■□□□□ 0
VRK3-207ENST00000594092 ULK4Q96C45 1275 aa15.06■□□□□ 0
VRK3-207ENST00000594092 GRAMD1AQ96CP6 724 aa15.06■□□□□ 0
VRK3-207ENST00000594092 DTD2Q96FN9 168 aa15.06■□□□□ 0
VRK3-207ENST00000594092 SEC16BQ96JE7 1060 aa15.06■□□□□ 0
VRK3-207ENST00000594092 ELAC2Q9BQ52 826 aaKnown RBP15.06■□□□□ 0
VRK3-207ENST00000594092 RIOK2Q9BVS4 552 aaKnown RBP15.06■□□□□ 0
VRK3-207ENST00000594092 BOCQ9BWV1 1114 aa15.06■□□□□ 0
VRK3-207ENST00000594092 SLC6A17Q9H1V8 727 aa15.06■□□□□ 0
VRK3-207ENST00000594092 ABCG8Q9H221 673 aa15.06■□□□□ 0
VRK3-207ENST00000594092 GPAMQ9HCL2 828 aa15.06■□□□□ 0
VRK3-207ENST00000594092 NDRG2Q9UN36 371 aaKnown RBP15.06■□□□□ 0
VRK3-207ENST00000594092 COQ6Q9Y2Z9 468 aa15.06■□□□□ 0
VRK3-207ENST00000594092 PLXNB3Q9ULL4 1909 aa15.05■□□□□ 0
VRK3-207ENST00000594092 A0A1W2PP55 124 aa15.05■□□□□ -0
VRK3-207ENST00000594092 MAN2B1O00754 1011 aa15.05■□□□□ -0
VRK3-207ENST00000594092 AP1G1O43747 822 aa15.05■□□□□ -0
VRK3-207ENST00000594092 MMP20O60882 483 aa15.05■□□□□ -0
VRK3-207ENST00000594092 RHOBTB1O94844 696 aa15.05■□□□□ -0
VRK3-207ENST00000594092 PROCP04070 461 aa15.05■□□□□ -0
VRK3-207ENST00000594092 BPGMP07738 259 aa15.05■□□□□ -0
VRK3-207ENST00000594092 C6P13671 934 aa15.05■□□□□ -0
VRK3-207ENST00000594092 RPS3P23396 243 aaKnown RBP eCLIP15.05■□□□□ -0
VRK3-207ENST00000594092 TAS2R38P59533 333 aa15.05■□□□□ -0
VRK3-207ENST00000594092 IRX4P78413 519 aa15.05■□□□□ -0
VRK3-207ENST00000594092 ZP2Q05996 745 aa15.05■□□□□ -0
VRK3-207ENST00000594092 HSF5Q4G112 596 aaPredicted RBP15.05■□□□□ -0
VRK3-207ENST00000594092 FOXR1Q6PIV2 292 aa15.05■□□□□ -0
VRK3-207ENST00000594092 TMEM207Q6UWW9 146 aa15.05■□□□□ -0
VRK3-207ENST00000594092 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.05■□□□□ -0
VRK3-207ENST00000594092 FAM47EQ6ZV65 393 aa15.05■□□□□ -0
VRK3-207ENST00000594092 CYP2U1Q7Z449 544 aa15.05■□□□□ -0
VRK3-207ENST00000594092 TMPRSS6Q8IU80 811 aa15.05■□□□□ -0
VRK3-207ENST00000594092 NUDCD3Q8IVD9 361 aa15.05■□□□□ -0
VRK3-207ENST00000594092 TRAM1L1Q8N609 369 aa15.05■□□□□ -0
VRK3-207ENST00000594092 FAM136AQ96C01 138 aa15.05■□□□□ -0
VRK3-207ENST00000594092 NXNL1Q96CM4 212 aa15.05■□□□□ -0
VRK3-207ENST00000594092 GPR78Q96P69 363 aa15.05■□□□□ -0
VRK3-207ENST00000594092 CLPBQ9H078 707 aa15.05■□□□□ -0
VRK3-207ENST00000594092 SMOXQ9NWM0 555 aa15.05■□□□□ -0
VRK3-207ENST00000594092 ZDHHC3Q9NYG2 299 aa15.05■□□□□ -0
VRK3-207ENST00000594092 TAS2R13Q9NYV9 303 aa15.05■□□□□ -0
VRK3-207ENST00000594092 CA14Q9ULX7 337 aa15.05■□□□□ -0
VRK3-207ENST00000594092 RUVBL2Q9Y230 463 aaKnown RBP15.05■□□□□ -0
VRK3-207ENST00000594092 COMMD10Q9Y6G5 202 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms