RNA–Protein interactions for RNA: ENST00000592647.1

TRAPPC6A-205, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2 BASIC

Gene TRAPPC6A, Length 514 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-205ENST00000592647 GAPDHSO14556 408 aaPredicted RBP21.29■■□□□ 1
TRAPPC6A-205ENST00000592647 EIF3HO15372 352 aaKnown RBP eCLIP21.29■■□□□ 1
TRAPPC6A-205ENST00000592647 GPR39O43194 453 aa21.29■■□□□ 1
TRAPPC6A-205ENST00000592647 PRAMEF1O95521 474 aa21.29■■□□□ 1
TRAPPC6A-205ENST00000592647 GOT2P00505 430 aaKnown RBP21.29■■□□□ 1
TRAPPC6A-205ENST00000592647 CFIP05156 583 aa21.29■■□□□ 1
TRAPPC6A-205ENST00000592647 POLBP06746 335 aa21.29■■□□□ 1
TRAPPC6A-205ENST00000592647 ENGP17813 658 aa21.29■■□□□ 1
TRAPPC6A-205ENST00000592647 AFF3P51826 1226 aaKnown RBP21.29■■□□□ 1
TRAPPC6A-205ENST00000592647 C21orf59P57076 290 aa21.29■■□□□ 1
TRAPPC6A-205ENST00000592647 PFN3P60673 137 aa21.29■■□□□ 1
TRAPPC6A-205ENST00000592647 ACVR1Q04771 509 aa21.29■■□□□ 1
TRAPPC6A-205ENST00000592647 TEAD4Q15561 434 aa21.29■■□□□ 1
TRAPPC6A-205ENST00000592647 KYAT3Q6YP21 454 aaKnown RBP21.29■■□□□ 1
TRAPPC6A-205ENST00000592647 TAS2R42Q7RTR8 314 aa21.29■■□□□ 1
TRAPPC6A-205ENST00000592647 ABI3BPQ7Z7G0 1075 aa21.29■■□□□ 1
TRAPPC6A-205ENST00000592647 HEATR4Q86WZ0 1026 aa21.29■■□□□ 1
TRAPPC6A-205ENST00000592647 PYROXD1Q8WU10 500 aa21.29■■□□□ 1
TRAPPC6A-205ENST00000592647 FUBP1Q96AE4 644 aaKnown RBP21.29■■□□□ 1
TRAPPC6A-205ENST00000592647 LRRC39Q96DD0 335 aa21.29■■□□□ 1
TRAPPC6A-205ENST00000592647 C19orf43Q9BQ61 176 aa21.29■■□□□ 1
TRAPPC6A-205ENST00000592647 WDR83Q9BRX9 315 aaKnown RBP21.29■■□□□ 1
TRAPPC6A-205ENST00000592647 LGR4Q9BXB1 951 aa21.29■■□□□ 1
TRAPPC6A-205ENST00000592647 FAM129AQ9BZQ8 928 aa21.29■■□□□ 1
TRAPPC6A-205ENST00000592647 WDR26Q9H7D7 661 aa21.29■■□□□ 1
TRAPPC6A-205ENST00000592647 NFKBIL1Q9UBC1 381 aaPredicted RBP21.29■■□□□ 1
TRAPPC6A-205ENST00000592647 A0A1B0GVT2 93 aa21.28■■□□□ 1
TRAPPC6A-205ENST00000592647 VAPBO95292 243 aa21.28■■□□□ 1
TRAPPC6A-205ENST00000592647 PYGLP06737 847 aa21.28■■□□□ 1
TRAPPC6A-205ENST00000592647 PRSS56P0CW18 603 aa21.28■■□□□ 1
TRAPPC6A-205ENST00000592647 PAMP19021 973 aa21.28■■□□□ 1
TRAPPC6A-205ENST00000592647 PSMA3P25788 255 aa21.28■■□□□ 1
TRAPPC6A-205ENST00000592647 ECHS1P30084 290 aa21.28■■□□□ 1
TRAPPC6A-205ENST00000592647 CA5AP35218 305 aa21.28■■□□□ 1
TRAPPC6A-205ENST00000592647 TRIM23P36406 574 aa21.28■■□□□ 1
TRAPPC6A-205ENST00000592647 RABIFP47224 123 aa21.28■■□□□ 1
TRAPPC6A-205ENST00000592647 CDKN1CP49918 316 aaPredicted RBP21.28■■□□□ 1
TRAPPC6A-205ENST00000592647 THOP1P52888 689 aa21.28■■□□□ 1
TRAPPC6A-205ENST00000592647 ITGA9Q13797 1035 aa21.28■■□□□ 1
TRAPPC6A-205ENST00000592647 PDE1CQ14123 709 aaPredicted RBP21.28■■□□□ 1
TRAPPC6A-205ENST00000592647 DUOXA1Q1HG43 343 aa21.28■■□□□ 1
TRAPPC6A-205ENST00000592647 ARMC3Q5W041 872 aa21.28■■□□□ 1
TRAPPC6A-205ENST00000592647 ADAMTSL4Q6UY14 1074 aa21.28■■□□□ 1
TRAPPC6A-205ENST00000592647 TMEM135Q86UB9 458 aa21.28■■□□□ 1
TRAPPC6A-205ENST00000592647 TRIM74Q86UV6 250 aa21.28■■□□□ 1
TRAPPC6A-205ENST00000592647 GDAP1Q8TB36 358 aa21.28■■□□□ 1
TRAPPC6A-205ENST00000592647 ZCCHC14Q8WYQ9 949 aaKnown RBP21.28■■□□□ 1
TRAPPC6A-205ENST00000592647 PEX13Q92968 403 aa21.28■■□□□ 1
TRAPPC6A-205ENST00000592647 HIC2Q96JB3 615 aa21.28■■□□□ 1
TRAPPC6A-205ENST00000592647 FMO2Q99518 471 aa21.28■■□□□ 1
TRAPPC6A-205ENST00000592647 PHPT1Q9NRX4 125 aaPredicted RBP21.28■■□□□ 1
TRAPPC6A-205ENST00000592647 CNOT6Q9ULM6 557 aaKnown RBP21.28■■□□□ 1
TRAPPC6A-205ENST00000592647 NEUROG3Q9Y4Z2 214 aa21.28■■□□□ 1
TRAPPC6A-205ENST00000592647 GOLGA8KD6RF30 607 aa21.27■■□□□ 1
TRAPPC6A-205ENST00000592647 GOLGA8TH3BQL2 631 aa21.27■■□□□ 1
TRAPPC6A-205ENST00000592647 H7C0S8 307 aa21.27■■□□□ 1
TRAPPC6A-205ENST00000592647 TLR4O00206 839 aa21.27■■□□□ 1
TRAPPC6A-205ENST00000592647 CACNB4O00305 520 aaPredicted RBP21.27■■□□□ 1
TRAPPC6A-205ENST00000592647 USP1O94782 785 aa21.27■■□□□ 1
TRAPPC6A-205ENST00000592647 SLC25A14O95258 325 aaPredicted RBP21.27■■□□□ 1
TRAPPC6A-205ENST00000592647 ITGALP20701 1170 aa21.27■■□□□ 1
TRAPPC6A-205ENST00000592647 HOXD12P35452 270 aa21.27■■□□□ 1
TRAPPC6A-205ENST00000592647 MAGEA4P43358 317 aa21.27■■□□□ 1
TRAPPC6A-205ENST00000592647 YPEL5P62699 121 aa21.27■■□□□ 1
TRAPPC6A-205ENST00000592647 CDK3Q00526 305 aa21.27■■□□□ 1
TRAPPC6A-205ENST00000592647 TPRG1LQ5T0D9 272 aa21.27■■□□□ 1
TRAPPC6A-205ENST00000592647 ZNF648Q5T619 568 aaPredicted RBP21.27■■□□□ 1
TRAPPC6A-205ENST00000592647 PEAR1Q5VY43 1037 aaPredicted RBP21.27■■□□□ 1
TRAPPC6A-205ENST00000592647 SLC23A3Q6PIS1 610 aa21.27■■□□□ 1
TRAPPC6A-205ENST00000592647 DOK6Q6PKX4 331 aa21.27■■□□□ 1
TRAPPC6A-205ENST00000592647 AFTPHQ6ULP2 937 aa21.27■■□□□ 1
TRAPPC6A-205ENST00000592647 CAPN12Q6ZSI9 719 aa21.27■■□□□ 1
TRAPPC6A-205ENST00000592647 SNX20Q7Z614 316 aa21.27■■□□□ 1
TRAPPC6A-205ENST00000592647 CCNJLQ8IV13 435 aa21.27■■□□□ 1
TRAPPC6A-205ENST00000592647 PALM2Q8IXS6 379 aa21.27■■□□□ 1
TRAPPC6A-205ENST00000592647 GSPT2Q8IYD1 628 aaKnown RBP21.27■■□□□ 1
TRAPPC6A-205ENST00000592647 OR4L1Q8NH43 312 aa21.27■■□□□ 1
TRAPPC6A-205ENST00000592647 CEP76Q8TAP6 659 aa21.27■■□□□ 1
TRAPPC6A-205ENST00000592647 FAM174AQ8TBP5 190 aa21.27■■□□□ 1
TRAPPC6A-205ENST00000592647 SKA1Q96BD8 255 aa21.27■■□□□ 1
TRAPPC6A-205ENST00000592647 NAT9Q9BTE0 207 aa21.27■■□□□ 1
TRAPPC6A-205ENST00000592647 TEX101Q9BY14 249 aa21.27■■□□□ 1
TRAPPC6A-205ENST00000592647 FSCN3Q9NQT6 498 aa21.27■■□□□ 1
TRAPPC6A-205ENST00000592647 IL1RAPL1Q9NZN1 696 aa21.27■■□□□ 1
TRAPPC6A-205ENST00000592647 CRLS1Q9UJA2 301 aa21.27■■□□□ 1
TRAPPC6A-205ENST00000592647 TMPRSS11EQ9UL52 423 aa21.27■■□□□ 1
TRAPPC6A-205ENST00000592647 TMEM98Q9Y2Y6 226 aa21.27■■□□□ 1
TRAPPC6A-205ENST00000592647 FAM169AQ9Y6X4 670 aa21.27■■□□□ 1
TRAPPC6A-205ENST00000592647 FAM208BQ5VWN6 2430 aa21.27■■□□□ 1
TRAPPC6A-205ENST00000592647 ZZEF1O43149 2961 aa21.27■□□□□ 0.99
TRAPPC6A-205ENST00000592647 SPEGQ15772 3267 aa21.26■□□□□ 0.99
TRAPPC6A-205ENST00000592647 ZCWPW2A0A1B0GU75 182 aa21.26■□□□□ 0.99
TRAPPC6A-205ENST00000592647 SRRM3A6NNA2 597 aaPredicted RBP21.26■□□□□ 0.99
TRAPPC6A-205ENST00000592647 TOR1BO14657 336 aa21.26■□□□□ 0.99
TRAPPC6A-205ENST00000592647 VILLO15195 856 aa21.26■□□□□ 0.99
TRAPPC6A-205ENST00000592647 HYAL3O43820 417 aaPredicted RBP21.26■□□□□ 0.99
TRAPPC6A-205ENST00000592647 ASMTLO95671 621 aa21.26■□□□□ 0.99
TRAPPC6A-205ENST00000592647 TTC4O95801 387 aa21.26■□□□□ 0.99
TRAPPC6A-205ENST00000592647 TEAD1P28347 426 aa21.26■□□□□ 0.99
TRAPPC6A-205ENST00000592647 ATXN3P54252 364 aaPredicted RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms