RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 LSSP48449 732 aa11.96□□□□□ -0.49
TPM4-212ENST00000590180 PPM1FP49593 454 aaPredicted RBP11.96□□□□□ -0.49
TPM4-212ENST00000590180 OR1D5P58170 312 aa11.96□□□□□ -0.49
TPM4-212ENST00000590180 DCDC1P59894 354 aa11.96□□□□□ -0.49
TPM4-212ENST00000590180 GABREP78334 506 aa11.96□□□□□ -0.49
TPM4-212ENST00000590180 LRP8Q14114 963 aa11.96□□□□□ -0.49
TPM4-212ENST00000590180 SPARCL1Q14515 664 aa11.96□□□□□ -0.49
TPM4-212ENST00000590180 AMZ1Q400G9 498 aa11.96□□□□□ -0.49
TPM4-212ENST00000590180 ZDHHC20Q5W0Z9 365 aa11.96□□□□□ -0.49
TPM4-212ENST00000590180 PDPK2PQ6A1A2 396 aa11.96□□□□□ -0.49
TPM4-212ENST00000590180 C19orf48Q6RUI8 117 aa11.96□□□□□ -0.49
TPM4-212ENST00000590180 USP53Q70EK8 1073 aa11.96□□□□□ -0.49
TPM4-212ENST00000590180 ADGRG6Q86SQ4 1221 aa11.96□□□□□ -0.49
TPM4-212ENST00000590180 NAGSQ8N159 534 aa11.96□□□□□ -0.49
TPM4-212ENST00000590180 TTC30BQ8N4P2 665 aa11.96□□□□□ -0.49
TPM4-212ENST00000590180 UBE2Q2Q8WVN8 375 aa11.96□□□□□ -0.49
TPM4-212ENST00000590180 HNRNPLLQ8WVV9 542 aaKnown RBP11.96□□□□□ -0.49
TPM4-212ENST00000590180 PATE1Q8WXA2 126 aa11.96□□□□□ -0.49
TPM4-212ENST00000590180 LRRC45Q96CN5 670 aa11.96□□□□□ -0.49
TPM4-212ENST00000590180 GRAMD1AQ96CP6 724 aa11.96□□□□□ -0.49
TPM4-212ENST00000590180 DCBLD2Q96PD2 775 aa11.96□□□□□ -0.49
TPM4-212ENST00000590180 CARD9Q9H257 536 aa11.96□□□□□ -0.49
TPM4-212ENST00000590180 POLR1BQ9H9Y6 1135 aa11.96□□□□□ -0.49
TPM4-212ENST00000590180 IL17CQ9P0M4 197 aa11.96□□□□□ -0.49
TPM4-212ENST00000590180 APPL1Q9UKG1 709 aa11.96□□□□□ -0.49
TPM4-212ENST00000590180 ATXN7L1Q9ULK2 861 aaPredicted RBP11.96□□□□□ -0.49
TPM4-212ENST00000590180 KCNK6Q9Y257 313 aa11.96□□□□□ -0.49
TPM4-212ENST00000590180 R3HDM2Q9Y2K5 976 aaKnown RBP11.96□□□□□ -0.49
TPM4-212ENST00000590180 PKP3Q9Y446 797 aa11.96□□□□□ -0.49
TPM4-212ENST00000590180 PCYT1BQ9Y5K3 369 aaPredicted RBP11.96□□□□□ -0.49
TPM4-212ENST00000590180 ENTPD2Q9Y5L3 495 aa11.96□□□□□ -0.49
TPM4-212ENST00000590180 SPEGQ15772 3267 aa11.96□□□□□ -0.5
TPM4-212ENST00000590180 PKD1L2Q7Z442 2459 aa11.95□□□□□ -0.5
TPM4-212ENST00000590180 C2orf81A6NN90 581 aa11.95□□□□□ -0.5
TPM4-212ENST00000590180 AGRPO00253 132 aa11.95□□□□□ -0.5
TPM4-212ENST00000590180 B4GAT1O43505 415 aa11.95□□□□□ -0.5
TPM4-212ENST00000590180 UGT1A9O60656 530 aa11.95□□□□□ -0.5
TPM4-212ENST00000590180 CDK14O94921 469 aa11.95□□□□□ -0.5
TPM4-212ENST00000590180 UGT1A6P19224 532 aa11.95□□□□□ -0.5
TPM4-212ENST00000590180 UGT1A1P22309 533 aa11.95□□□□□ -0.5
TPM4-212ENST00000590180 UGT1A4P22310 534 aa11.95□□□□□ -0.5
TPM4-212ENST00000590180 RBMS1P29558 406 aaKnown RBP11.95□□□□□ -0.5
TPM4-212ENST00000590180 UGT1A3P35503 534 aa11.95□□□□□ -0.5
TPM4-212ENST00000590180 UGT1A5P35504 534 aa11.95□□□□□ -0.5
TPM4-212ENST00000590180 SPAM1P38567 509 aa11.95□□□□□ -0.5
TPM4-212ENST00000590180 B4GALNT1Q00973 533 aa11.95□□□□□ -0.5
TPM4-212ENST00000590180 KLF1Q13351 362 aaPredicted RBP11.95□□□□□ -0.5
TPM4-212ENST00000590180 OLIG2Q13516 323 aa11.95□□□□□ -0.5
TPM4-212ENST00000590180 PTPRCAPQ14761 206 aa11.95□□□□□ -0.5
TPM4-212ENST00000590180 CHRNA6Q15825 494 aa11.95□□□□□ -0.5
TPM4-212ENST00000590180 PARP6Q2NL67 630 aa11.95□□□□□ -0.5
TPM4-212ENST00000590180 ATP13A5Q4VNC0 1218 aa11.95□□□□□ -0.5
TPM4-212ENST00000590180 C3orf38Q5JPI3 329 aa11.95□□□□□ -0.5
TPM4-212ENST00000590180 CRTC3Q6UUV7 619 aa11.95□□□□□ -0.5
TPM4-212ENST00000590180 FAM151BQ6UXP7 276 aa11.95□□□□□ -0.5
TPM4-212ENST00000590180 RANBP10Q6VN20 620 aa11.95□□□□□ -0.5
TPM4-212ENST00000590180 C17orf82Q86X59 251 aaPredicted RBP11.95□□□□□ -0.5
TPM4-212ENST00000590180 PHYKPLQ8IUZ5 450 aa11.95□□□□□ -0.5
TPM4-212ENST00000590180 LSMEM2Q8N112 164 aa11.95□□□□□ -0.5
TPM4-212ENST00000590180 TAB3Q8N5C8 712 aaPredicted RBP11.95□□□□□ -0.5
TPM4-212ENST00000590180 FGF11Q92914 225 aa11.95□□□□□ -0.5
TPM4-212ENST00000590180 TTC25Q96NG3 672 aa11.95□□□□□ -0.5
TPM4-212ENST00000590180 PPP1R2P1Q96PQ5 205 aa11.95□□□□□ -0.5
TPM4-212ENST00000590180 PLEKHG4BQ96PX9 1271 aa11.95□□□□□ -0.5
TPM4-212ENST00000590180 ALS2CR12Q96Q35 445 aa11.95□□□□□ -0.5
TPM4-212ENST00000590180 TMEM121Q9BTD3 319 aa11.95□□□□□ -0.5
TPM4-212ENST00000590180 FOXP3Q9BZS1 431 aa11.95□□□□□ -0.5
TPM4-212ENST00000590180 STRADBQ9C0K7 418 aa11.95□□□□□ -0.5
TPM4-212ENST00000590180 UGT1A7Q9HAW7 530 aa11.95□□□□□ -0.5
TPM4-212ENST00000590180 UGT1A10Q9HAW8 530 aa11.95□□□□□ -0.5
TPM4-212ENST00000590180 UGT1A8Q9HAW9 530 aa11.95□□□□□ -0.5
TPM4-212ENST00000590180 EPB41L5Q9HCM4 733 aa11.95□□□□□ -0.5
TPM4-212ENST00000590180 IL26Q9NPH9 171 aa11.95□□□□□ -0.5
TPM4-212ENST00000590180 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.95□□□□□ -0.5
TPM4-212ENST00000590180 NFKBIL1Q9UBC1 381 aaPredicted RBP11.95□□□□□ -0.5
TPM4-212ENST00000590180 SATB2Q9UPW6 733 aa11.95□□□□□ -0.5
TPM4-212ENST00000590180 KMT2BQ9UMN6 2715 aaPredicted RBP11.95□□□□□ -0.5
TPM4-212ENST00000590180 LRP4O75096 1905 aa11.94□□□□□ -0.5
TPM4-212ENST00000590180 GLYATL1P3A0A0U1RQE8 302 aa11.94□□□□□ -0.5
TPM4-212ENST00000590180 PPM1DO15297 605 aa11.94□□□□□ -0.5
TPM4-212ENST00000590180 VEGFDO43915 354 aa11.94□□□□□ -0.5
TPM4-212ENST00000590180 METTL18O95568 372 aa11.94□□□□□ -0.5
TPM4-212ENST00000590180 LPOP22079 712 aaPredicted RBP11.94□□□□□ -0.5
TPM4-212ENST00000590180 ADRA1AP35348 466 aa11.94□□□□□ -0.5
TPM4-212ENST00000590180 INHBCP55103 352 aa11.94□□□□□ -0.5
TPM4-212ENST00000590180 TMEM115Q12893 351 aaPredicted RBP11.94□□□□□ -0.5
TPM4-212ENST00000590180 GTF2H3Q13889 308 aa11.94□□□□□ -0.5
TPM4-212ENST00000590180 TAF1AQ15573 450 aaPredicted RBP11.94□□□□□ -0.5
TPM4-212ENST00000590180 MEI1Q5TIA1 1274 aa11.94□□□□□ -0.5
TPM4-212ENST00000590180 LRRC69Q6ZNQ3 347 aa11.94□□□□□ -0.5
TPM4-212ENST00000590180 SPRED1Q7Z699 444 aa11.94□□□□□ -0.5
TPM4-212ENST00000590180 B3GNT8Q7Z7M8 397 aa11.94□□□□□ -0.5
TPM4-212ENST00000590180 PIM3Q86V86 326 aa11.94□□□□□ -0.5
TPM4-212ENST00000590180 SLC13A5Q86YT5 568 aaPredicted RBP11.94□□□□□ -0.5
TPM4-212ENST00000590180 WDR36Q8NI36 951 aaKnown RBP11.94□□□□□ -0.5
TPM4-212ENST00000590180 SLC35B2Q8TB61 432 aa11.94□□□□□ -0.5
TPM4-212ENST00000590180 ZNF398Q8TD17 642 aa11.94□□□□□ -0.5
TPM4-212ENST00000590180 BRSK1Q8TDC3 778 aa11.94□□□□□ -0.5
TPM4-212ENST00000590180 TMEM74Q96NL1 305 aa11.94□□□□□ -0.5
TPM4-212ENST00000590180 TBL1YQ9BQ87 522 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms