RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 ZNF669Q96BR6 464 aaPredicted RBP18.81■□□□□ 0.6
CLPTM1-209ENST00000588855 STAMBPL1Q96FJ0 436 aa18.81■□□□□ 0.6
CLPTM1-209ENST00000588855 WDR83Q9BRX9 315 aaKnown RBP18.81■□□□□ 0.6
CLPTM1-209ENST00000588855 MRPL40Q9NQ50 206 aaKnown RBP18.81■□□□□ 0.6
CLPTM1-209ENST00000588855 SMOXQ9NWM0 555 aa18.81■□□□□ 0.6
CLPTM1-209ENST00000588855 KLQ9UEF7 1012 aa18.81■□□□□ 0.6
CLPTM1-209ENST00000588855 KLF15Q9UIH9 416 aa18.81■□□□□ 0.6
CLPTM1-209ENST00000588855 TMEM98Q9Y2Y6 226 aa18.81■□□□□ 0.6
CLPTM1-209ENST00000588855 SLC30A1Q9Y6M5 507 aa18.81■□□□□ 0.6
CLPTM1-209ENST00000588855 CABIN1Q9Y6J0 2220 aa18.8■□□□□ 0.6
CLPTM1-209ENST00000588855 FAM237BA0A1B0GVD1 139 aa18.8■□□□□ 0.6
CLPTM1-209ENST00000588855 MTX2O75431 263 aa18.8■□□□□ 0.6
CLPTM1-209ENST00000588855 GOT2P00505 430 aaKnown RBP18.8■□□□□ 0.6
CLPTM1-209ENST00000588855 CEACAM5P06731 702 aa18.8■□□□□ 0.6
CLPTM1-209ENST00000588855 RHOXF2BP0C7M4 288 aa18.8■□□□□ 0.6
CLPTM1-209ENST00000588855 CDKN1CP49918 316 aaPredicted RBP18.8■□□□□ 0.6
CLPTM1-209ENST00000588855 PRAMEP78395 509 aa18.8■□□□□ 0.6
CLPTM1-209ENST00000588855 ALG11Q2TAA5 492 aa18.8■□□□□ 0.6
CLPTM1-209ENST00000588855 KHDC1Q4VXA5 237 aaKnown RBP18.8■□□□□ 0.6
CLPTM1-209ENST00000588855 ZRANB3Q5FWF4 1079 aa18.8■□□□□ 0.6
CLPTM1-209ENST00000588855 HP1BP3Q5SSJ5 553 aaPredicted RBP18.8■□□□□ 0.6
CLPTM1-209ENST00000588855 AFTPHQ6ULP2 937 aa18.8■□□□□ 0.6
CLPTM1-209ENST00000588855 SNX20Q7Z614 316 aa18.8■□□□□ 0.6
CLPTM1-209ENST00000588855 IGDCC3Q8IVU1 814 aa18.8■□□□□ 0.6
CLPTM1-209ENST00000588855 RBFAQ8N0V3 343 aa18.8■□□□□ 0.6
CLPTM1-209ENST00000588855 GDAP1Q8TB36 358 aa18.8■□□□□ 0.6
CLPTM1-209ENST00000588855 TSACCQ96A04 125 aaPredicted RBP18.8■□□□□ 0.6
CLPTM1-209ENST00000588855 FAM122AQ96E09 287 aa18.8■□□□□ 0.6
CLPTM1-209ENST00000588855 RHOXF2Q9BQY4 288 aa18.8■□□□□ 0.6
CLPTM1-209ENST00000588855 TCEAL2Q9H3H9 227 aaPredicted RBP18.8■□□□□ 0.6
CLPTM1-209ENST00000588855 DNAJC28Q9NX36 388 aa18.8■□□□□ 0.6
CLPTM1-209ENST00000588855 SLC17A4Q9Y2C5 497 aa18.8■□□□□ 0.6
CLPTM1-209ENST00000588855 PRSS38A1L453 326 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 MAGEB16A2A368 324 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 AGAP14A8MT82 685 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 CDX4O14627 284 aaPredicted RBP18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 SCAMP1O15126 338 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 GDF9O60383 454 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 ASMTLO95671 621 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 NME1P15531 152 aaKnown RBP18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 FOXN2P32314 431 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 PLA2G5P39877 138 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 SRP54P61011 504 aaKnown RBP18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 IL9RQ01113 521 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 CAV1Q03135 178 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 SHBQ15464 509 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 SMAD1Q15797 465 aaKnown RBP18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 ANKRD20A4Q4UJ75 823 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 TEX35Q5T0J7 233 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 GPRC6AQ5T6X5 926 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 PSAPL1Q6NUJ1 521 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 RD3Q7Z3Z2 195 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 TMEM135Q86UB9 458 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 PHACTR4Q8IZ21 702 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 OXR1Q8N573 874 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 OR6P1Q8NGX9 317 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 FCRL3Q96P31 734 aaPredicted RBP18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 EBNA1BP2Q99848 306 aaKnown RBP18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 FAM114A2Q9NRY5 505 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 ZDHHC18Q9NUE0 388 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 CRLS1Q9UJA2 301 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 MOSPD1Q9UJG1 213 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 CHMP2BQ9UQN3 213 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 RPS6KL1Q9Y6S9 549 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 TRBV5-4A0A0C4DH59 114 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 A0A1B0GTQ1 180 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 E7ESA3 106 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 TNFRSF10CO14798 259 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 FOXD2O60548 495 aaPredicted RBP18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 FUCA1P04066 466 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 CSF2P04141 144 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 PGAM1P18669 254 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 ARNTP27540 789 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 ELK3P41970 407 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 RXRGP48443 463 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 ARRB1P49407 418 aaPredicted RBP18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 PPARDQ03181 441 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 CACNG1Q06432 222 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 PDIA2Q13087 525 aaKnown RBP18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 FASTKD3Q14CZ7 662 aaKnown RBP18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 GPR33Q49SQ1 333 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 KIAA0930Q6ICG6 404 aaPredicted RBP18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 MARK2Q7KZI7 788 aaKnown RBP18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 ADGRG6Q86SQ4 1221 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 HID1Q8IV36 788 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 PIANPQ8IYJ0 282 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 KIAA2013Q8IYS2 634 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 GPR161Q8N6U8 529 aaKnown RBP18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 PNPLA1Q8N8W4 532 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 DDHD1Q8NEL9 900 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 OR2AG1Q9H205 316 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 CYP4F12Q9HCS2 524 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 ATXN10Q9UBB4 475 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 TEX264Q9Y6I9 313 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 CFAP54Q96N23 3096 aa18.79■□□□□ 0.6
CLPTM1-209ENST00000588855 ZCWPW2A0A1B0GU75 182 aa18.78■□□□□ 0.6
CLPTM1-209ENST00000588855 SDC3O75056 442 aa18.78■□□□□ 0.6
CLPTM1-209ENST00000588855 USP1O94782 785 aa18.78■□□□□ 0.6
CLPTM1-209ENST00000588855 JUNDP17535 347 aa18.78■□□□□ 0.6
CLPTM1-209ENST00000588855 CCT8P50990 548 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 238.6 ms