RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 PYCR3Q53H96 274 aa20.01■□□□□ 0.79
DDX39A-207ENST00000588542 MICALCLQ6ZW33 695 aa20.01■□□□□ 0.79
DDX39A-207ENST00000588542 ZNF534Q76KX8 674 aa20.01■□□□□ 0.79
DDX39A-207ENST00000588542 ADGRG6Q86SQ4 1221 aa20.01■□□□□ 0.79
DDX39A-207ENST00000588542 SLCO6A1Q86UG4 719 aa20.01■□□□□ 0.79
DDX39A-207ENST00000588542 NRROSQ86YC3 692 aa20.01■□□□□ 0.79
DDX39A-207ENST00000588542 PHYKPLQ8IUZ5 450 aa20.01■□□□□ 0.79
DDX39A-207ENST00000588542 SDR16C5Q8N3Y7 309 aa20.01■□□□□ 0.79
DDX39A-207ENST00000588542 FAM181AQ8N9Y4 354 aa20.01■□□□□ 0.79
DDX39A-207ENST00000588542 GPBAR1Q8TDU6 330 aa20.01■□□□□ 0.79
DDX39A-207ENST00000588542 SLCO2A1Q92959 643 aa20.01■□□□□ 0.79
DDX39A-207ENST00000588542 DUSP23Q9BVJ7 150 aa20.01■□□□□ 0.79
DDX39A-207ENST00000588542 TRIM39Q9HCM9 518 aa20.01■□□□□ 0.79
DDX39A-207ENST00000588542 NLE1Q9NVX2 485 aaPredicted RBP20.01■□□□□ 0.79
DDX39A-207ENST00000588542 TRNAU1APQ9NX07 287 aaKnown RBP20.01■□□□□ 0.79
DDX39A-207ENST00000588542 U3KQA8 63 aa20.01■□□□□ 0.79
DDX39A-207ENST00000588542 PRAMEF1O95521 474 aa20■□□□□ 0.79
DDX39A-207ENST00000588542 ECEL1O95672 775 aa20■□□□□ 0.79
DDX39A-207ENST00000588542 ANXA6P08133 673 aa20■□□□□ 0.79
DDX39A-207ENST00000588542 FTH1P19P0C7X4 201 aa20■□□□□ 0.79
DDX39A-207ENST00000588542 ZNF8P17098 575 aaPredicted RBP20■□□□□ 0.79
DDX39A-207ENST00000588542 HADHAP40939 763 aa20■□□□□ 0.79
DDX39A-207ENST00000588542 PAFAH1B1P43034 410 aa20■□□□□ 0.79
DDX39A-207ENST00000588542 TERF1P54274 439 aa20■□□□□ 0.79
DDX39A-207ENST00000588542 DNAJC3Q13217 504 aa20■□□□□ 0.79
DDX39A-207ENST00000588542 ITGA9Q13797 1035 aa20■□□□□ 0.79
DDX39A-207ENST00000588542 C6orf132Q5T0Z8 1188 aa20■□□□□ 0.79
DDX39A-207ENST00000588542 ANKRD22Q5VYY1 191 aa20■□□□□ 0.79
DDX39A-207ENST00000588542 ZCCHC8Q6NZY4 707 aaKnown RBP20■□□□□ 0.79
DDX39A-207ENST00000588542 LVRNQ6Q4G3 990 aa20■□□□□ 0.79
DDX39A-207ENST00000588542 ERMP1Q7Z2K6 904 aa20■□□□□ 0.79
DDX39A-207ENST00000588542 GKN2Q86XP6 184 aa20■□□□□ 0.79
DDX39A-207ENST00000588542 ZNF398Q8TD17 642 aa20■□□□□ 0.79
DDX39A-207ENST00000588542 STYXQ8WUJ0 223 aa20■□□□□ 0.79
DDX39A-207ENST00000588542 CPT1BQ92523 772 aa20■□□□□ 0.79
DDX39A-207ENST00000588542 APOLD1Q96LR9 279 aa20■□□□□ 0.79
DDX39A-207ENST00000588542 C16orf45Q96MC5 204 aaPredicted RBP20■□□□□ 0.79
DDX39A-207ENST00000588542 RANBP9Q96S59 729 aa20■□□□□ 0.79
DDX39A-207ENST00000588542 BOCQ9BWV1 1114 aa20■□□□□ 0.79
DDX39A-207ENST00000588542 OR2AG1Q9H205 316 aa20■□□□□ 0.79
DDX39A-207ENST00000588542 SMOXQ9NWM0 555 aa20■□□□□ 0.79
DDX39A-207ENST00000588542 APPL1Q9UKG1 709 aa20■□□□□ 0.79
DDX39A-207ENST00000588542 PLEKHM1Q9Y4G2 1056 aa20■□□□□ 0.79
DDX39A-207ENST00000588542 ASXL3Q9C0F0 2248 aa20■□□□□ 0.79
DDX39A-207ENST00000588542 AGAP14A8MT82 685 aa19.99■□□□□ 0.79
DDX39A-207ENST00000588542 H7C0S8 307 aa19.99■□□□□ 0.79
DDX39A-207ENST00000588542 NUAK1O60285 661 aa19.99■□□□□ 0.79
DDX39A-207ENST00000588542 MTX2O75431 263 aa19.99■□□□□ 0.79
DDX39A-207ENST00000588542 SRP72O76094 671 aaKnown RBP19.99■□□□□ 0.79
DDX39A-207ENST00000588542 DKK1O94907 266 aa19.99■□□□□ 0.79
DDX39A-207ENST00000588542 GAS8O95995 478 aa19.99■□□□□ 0.79
DDX39A-207ENST00000588542 MYF5P13349 255 aa19.99■□□□□ 0.79
DDX39A-207ENST00000588542 CTBSQ01459 385 aa19.99■□□□□ 0.79
DDX39A-207ENST00000588542 TAF8Q7Z7C8 310 aa19.99■□□□□ 0.79
DDX39A-207ENST00000588542 GALNT13Q8IUC8 556 aa19.99■□□□□ 0.79
DDX39A-207ENST00000588542 CDKN2AIPNLQ96HQ2 116 aa19.99■□□□□ 0.79
DDX39A-207ENST00000588542 OR2M4Q96R27 311 aa19.99■□□□□ 0.79
DDX39A-207ENST00000588542 RMI1Q9H9A7 625 aa19.99■□□□□ 0.79
DDX39A-207ENST00000588542 PRKAB1Q9Y478 270 aa19.99■□□□□ 0.79
DDX39A-207ENST00000588542 GPSM3Q9Y4H4 160 aa19.99■□□□□ 0.79
DDX39A-207ENST00000588542 RP1P56715 2156 aa19.98■□□□□ 0.79
DDX39A-207ENST00000588542 CCDC78A2IDD5 438 aa19.98■□□□□ 0.79
DDX39A-207ENST00000588542 HEATR9A2RTY3 570 aa19.98■□□□□ 0.79
DDX39A-207ENST00000588542 CCDC188H7C350 402 aa19.98■□□□□ 0.79
DDX39A-207ENST00000588542 CHUKO15111 745 aa19.98■□□□□ 0.79
DDX39A-207ENST00000588542 VEGFDO43915 354 aa19.98■□□□□ 0.79
DDX39A-207ENST00000588542 TMEM63AO94886 807 aa19.98■□□□□ 0.79
DDX39A-207ENST00000588542 CKMT1AP12532 417 aa19.98■□□□□ 0.79
DDX39A-207ENST00000588542 CKMT2P17540 419 aa19.98■□□□□ 0.79
DDX39A-207ENST00000588542 ADRA1DP25100 572 aa19.98■□□□□ 0.79
DDX39A-207ENST00000588542 AK4P27144 223 aaPredicted RBP19.98■□□□□ 0.79
DDX39A-207ENST00000588542 ACADVLP49748 655 aa19.98■□□□□ 0.79
DDX39A-207ENST00000588542 ARSDP51689 593 aa19.98■□□□□ 0.79
DDX39A-207ENST00000588542 NFATC2Q13469 925 aa19.98■□□□□ 0.79
DDX39A-207ENST00000588542 PTK6Q13882 451 aa19.98■□□□□ 0.79
DDX39A-207ENST00000588542 LRRC8BQ6P9F7 803 aa19.98■□□□□ 0.79
DDX39A-207ENST00000588542 KLHL7Q8IXQ5 586 aa19.98■□□□□ 0.79
DDX39A-207ENST00000588542 SLC35F3Q8IY50 421 aa19.98■□□□□ 0.79
DDX39A-207ENST00000588542 DDHD1Q8NEL9 900 aa19.98■□□□□ 0.79
DDX39A-207ENST00000588542 ZNF778Q96MU6 729 aa19.98■□□□□ 0.79
DDX39A-207ENST00000588542 ASB8Q9H765 288 aa19.98■□□□□ 0.79
DDX39A-207ENST00000588542 ZNHIT2Q9UHR6 403 aa19.98■□□□□ 0.79
DDX39A-207ENST00000588542 RIMKLBQ9ULI2 386 aa19.98■□□□□ 0.79
DDX39A-207ENST00000588542 DOLKQ9UPQ8 538 aa19.98■□□□□ 0.79
DDX39A-207ENST00000588542 TCAF1Q9Y4C2 921 aa19.98■□□□□ 0.79
DDX39A-207ENST00000588542 PIKFYVEQ9Y2I7 2098 aa19.98■□□□□ 0.79
DDX39A-207ENST00000588542 MED19A0JLT2 244 aaPredicted RBP19.97■□□□□ 0.79
DDX39A-207ENST00000588542 ACP1P24666 158 aa19.97■□□□□ 0.79
DDX39A-207ENST00000588542 MC4RP32245 332 aa19.97■□□□□ 0.79
DDX39A-207ENST00000588542 NPY2RP49146 381 aa19.97■□□□□ 0.79
DDX39A-207ENST00000588542 SESN2P58004 480 aaPredicted RBP19.97■□□□□ 0.79
DDX39A-207ENST00000588542 TMEM115Q12893 351 aaPredicted RBP19.97■□□□□ 0.79
DDX39A-207ENST00000588542 PPP1R7Q15435 360 aa19.97■□□□□ 0.79
DDX39A-207ENST00000588542 GPRC6AQ5T6X5 926 aa19.97■□□□□ 0.79
DDX39A-207ENST00000588542 TSTD2Q5T7W7 516 aa19.97■□□□□ 0.79
DDX39A-207ENST00000588542 CAND1Q86VP6 1230 aaKnown RBP19.97■□□□□ 0.79
DDX39A-207ENST00000588542 SFTPA2Q8IWL1 248 aa19.97■□□□□ 0.79
DDX39A-207ENST00000588542 PNPLA1Q8N8W4 532 aa19.97■□□□□ 0.79
DDX39A-207ENST00000588542 OR13J1Q8NGT2 312 aa19.97■□□□□ 0.79
DDX39A-207ENST00000588542 TRIM44Q96DX7 344 aaPredicted RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms