RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 LEFTY1O75610 366 aa20.3■□□□□ 0.84
ATG4D-204ENST00000586417 SRP72O76094 671 aaKnown RBP20.3■□□□□ 0.84
ATG4D-204ENST00000586417 FMO4P31512 558 aa20.3■□□□□ 0.84
ATG4D-204ENST00000586417 CA5AP35218 305 aa20.3■□□□□ 0.84
ATG4D-204ENST00000586417 KPNA2P52292 529 aaKnown RBP20.3■□□□□ 0.84
ATG4D-204ENST00000586417 PRKCQQ04759 706 aa20.3■□□□□ 0.84
ATG4D-204ENST00000586417 TECRLQ5HYJ1 363 aa20.3■□□□□ 0.84
ATG4D-204ENST00000586417 TJAP1Q5JTD0 557 aa20.3■□□□□ 0.84
ATG4D-204ENST00000586417 LRRC66Q68CR7 880 aa20.3■□□□□ 0.84
ATG4D-204ENST00000586417 BRAT1Q6PJG6 821 aa20.3■□□□□ 0.84
ATG4D-204ENST00000586417 FAM151BQ6UXP7 276 aa20.3■□□□□ 0.84
ATG4D-204ENST00000586417 NAPRTQ6XQN6 538 aa20.3■□□□□ 0.84
ATG4D-204ENST00000586417 CHPFQ8IZ52 775 aa20.3■□□□□ 0.84
ATG4D-204ENST00000586417 MRPL57Q9BQC6 102 aaKnown RBP20.3■□□□□ 0.84
ATG4D-204ENST00000586417 USH1CQ9Y6N9 552 aa20.3■□□□□ 0.84
ATG4D-204ENST00000586417 STON1Q9Y6Q2 735 aa20.3■□□□□ 0.84
ATG4D-204ENST00000586417 TRIM13O60858 407 aa20.29■□□□□ 0.84
ATG4D-204ENST00000586417 PRAMEF1O95521 474 aa20.29■□□□□ 0.84
ATG4D-204ENST00000586417 TARSP26639 723 aaKnown RBP20.29■□□□□ 0.84
ATG4D-204ENST00000586417 SLC1A6P48664 564 aa20.29■□□□□ 0.84
ATG4D-204ENST00000586417 ADARP55265 1226 aaKnown RBP20.29■□□□□ 0.84
ATG4D-204ENST00000586417 HNRNPA1L2Q32P51 320 aaKnown RBP20.29■□□□□ 0.84
ATG4D-204ENST00000586417 ARSIQ5FYB1 569 aa20.29■□□□□ 0.84
ATG4D-204ENST00000586417 CTSL3PQ5NE16 218 aa20.29■□□□□ 0.84
ATG4D-204ENST00000586417 AGAP9Q5VTM2 703 aa20.29■□□□□ 0.84
ATG4D-204ENST00000586417 IL17RCQ8NAC3 791 aa20.29■□□□□ 0.84
ATG4D-204ENST00000586417 KDM1BQ8NB78 822 aa20.29■□□□□ 0.84
ATG4D-204ENST00000586417 SORT1Q99523 831 aa20.29■□□□□ 0.84
ATG4D-204ENST00000586417 FOXQ1Q9C009 403 aa20.29■□□□□ 0.84
ATG4D-204ENST00000586417 B4GALT6Q9UBX8 382 aa20.29■□□□□ 0.84
ATG4D-204ENST00000586417 IL36AQ9UHA7 158 aa20.29■□□□□ 0.84
ATG4D-204ENST00000586417 DCTN4Q9UJW0 460 aa20.29■□□□□ 0.84
ATG4D-204ENST00000586417 APPL1Q9UKG1 709 aa20.29■□□□□ 0.84
ATG4D-204ENST00000586417 TRBV5-4A0A0C4DH59 114 aa20.29■□□□□ 0.84
ATG4D-204ENST00000586417 PFDN6O15212 129 aa20.29■□□□□ 0.84
ATG4D-204ENST00000586417 DLX3O60479 287 aa20.29■□□□□ 0.84
ATG4D-204ENST00000586417 KIAA0754O94854 1291 aa20.29■□□□□ 0.84
ATG4D-204ENST00000586417 ZNF37AP17032 561 aaPredicted RBP20.29■□□□□ 0.84
ATG4D-204ENST00000586417 PTGER3P43115 390 aa20.29■□□□□ 0.84
ATG4D-204ENST00000586417 STARD6P59095 220 aa20.29■□□□□ 0.84
ATG4D-204ENST00000586417 PTSQ03393 145 aa20.29■□□□□ 0.84
ATG4D-204ENST00000586417 ENPP2Q13822 863 aa20.29■□□□□ 0.84
ATG4D-204ENST00000586417 SPRED3Q2MJR0 410 aa20.29■□□□□ 0.84
ATG4D-204ENST00000586417 LRRC73Q5JTD7 316 aa20.29■□□□□ 0.84
ATG4D-204ENST00000586417 C9orf64Q5T6V5 341 aa20.29■□□□□ 0.84
ATG4D-204ENST00000586417 CERS6Q6ZMG9 384 aa20.29■□□□□ 0.84
ATG4D-204ENST00000586417 CCDC121Q6ZUS5 278 aa20.29■□□□□ 0.84
ATG4D-204ENST00000586417 TAS2R42Q7RTR8 314 aa20.29■□□□□ 0.84
ATG4D-204ENST00000586417 GATA5Q9BWX5 397 aaPredicted RBP20.29■□□□□ 0.84
ATG4D-204ENST00000586417 P2RY12Q9H244 342 aa20.29■□□□□ 0.84
ATG4D-204ENST00000586417 CKAP5Q14008 2032 aa20.28■□□□□ 0.84
ATG4D-204ENST00000586417 GLYATL1P3A0A0U1RQE8 302 aa20.28■□□□□ 0.84
ATG4D-204ENST00000586417 ADAM23O75077 832 aa20.28■□□□□ 0.84
ATG4D-204ENST00000586417 RHOBTB1O94844 696 aa20.28■□□□□ 0.84
ATG4D-204ENST00000586417 EPHX1P07099 455 aa20.28■□□□□ 0.84
ATG4D-204ENST00000586417 CHRNB1P11230 501 aa20.28■□□□□ 0.84
ATG4D-204ENST00000586417 PKMP14618 531 aaKnown RBP20.28■□□□□ 0.84
ATG4D-204ENST00000586417 SPAM1P38567 509 aa20.28■□□□□ 0.84
ATG4D-204ENST00000586417 ABCE1P61221 599 aaKnown RBP20.28■□□□□ 0.84
ATG4D-204ENST00000586417 POLR2LP62875 67 aaKnown RBP20.28■□□□□ 0.84
ATG4D-204ENST00000586417 NFATC2Q13469 925 aa20.28■□□□□ 0.84
ATG4D-204ENST00000586417 ACAP2Q15057 778 aa20.28■□□□□ 0.84
ATG4D-204ENST00000586417 LIPMQ5VYY2 423 aa20.28■□□□□ 0.84
ATG4D-204ENST00000586417 SNX20Q7Z614 316 aa20.28■□□□□ 0.84
ATG4D-204ENST00000586417 CRLF3Q8IUI8 442 aa20.28■□□□□ 0.84
ATG4D-204ENST00000586417 GPR26Q8NDV2 337 aa20.28■□□□□ 0.84
ATG4D-204ENST00000586417 LRIG1Q96JA1 1093 aa20.28■□□□□ 0.84
ATG4D-204ENST00000586417 OSBPL1AQ9BXW6 950 aa20.28■□□□□ 0.84
ATG4D-204ENST00000586417 KDM4CQ9H3R0 1056 aa20.28■□□□□ 0.84
ATG4D-204ENST00000586417 ANKRD65E5RJM6 399 aa20.27■□□□□ 0.84
ATG4D-204ENST00000586417 KLF8O95600 359 aaPredicted RBP20.27■□□□□ 0.84
ATG4D-204ENST00000586417 C1SP09871 688 aa20.27■□□□□ 0.84
ATG4D-204ENST00000586417 CD9P21926 228 aa20.27■□□□□ 0.84
ATG4D-204ENST00000586417 PTPN5P54829 565 aa20.27■□□□□ 0.84
ATG4D-204ENST00000586417 ZXDAP98168 799 aa20.27■□□□□ 0.84
ATG4D-204ENST00000586417 FZD5Q13467 585 aa20.27■□□□□ 0.84
ATG4D-204ENST00000586417 UBXN2BQ14CS0 331 aa20.27■□□□□ 0.84
ATG4D-204ENST00000586417 Q6ZS52 159 aa20.27■□□□□ 0.84
ATG4D-204ENST00000586417 STK40Q8N2I9 435 aa20.27■□□□□ 0.84
ATG4D-204ENST00000586417 FITM2Q8N6M3 262 aa20.27■□□□□ 0.84
ATG4D-204ENST00000586417 TXNDC5Q8NBS9 432 aaKnown RBP20.27■□□□□ 0.84
ATG4D-204ENST00000586417 RPLP0P6Q8NHW5 317 aa20.27■□□□□ 0.84
ATG4D-204ENST00000586417 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.27■□□□□ 0.84
ATG4D-204ENST00000586417 FAM136AQ96C01 138 aa20.27■□□□□ 0.84
ATG4D-204ENST00000586417 CCDC97Q96F63 343 aaPredicted RBP20.27■□□□□ 0.84
ATG4D-204ENST00000586417 CCDC68Q9H2F9 335 aa20.27■□□□□ 0.84
ATG4D-204ENST00000586417 ASB8Q9H765 288 aa20.27■□□□□ 0.84
ATG4D-204ENST00000586417 TAS2R13Q9NYV9 303 aa20.27■□□□□ 0.84
ATG4D-204ENST00000586417 OAS3Q9Y6K5 1087 aaKnown RBP20.27■□□□□ 0.84
ATG4D-204ENST00000586417 A0A0G2JND7 137 aa20.26■□□□□ 0.83
ATG4D-204ENST00000586417 EDDM13A0A1B0GTR0 161 aa20.26■□□□□ 0.83
ATG4D-204ENST00000586417 KANSL1LA0AUZ9 987 aa20.26■□□□□ 0.83
ATG4D-204ENST00000586417 AGAP14A8MT82 685 aa20.26■□□□□ 0.83
ATG4D-204ENST00000586417 H2AFYO75367 372 aaKnown RBP20.26■□□□□ 0.83
ATG4D-204ENST00000586417 CD1DP15813 335 aa20.26■□□□□ 0.83
ATG4D-204ENST00000586417 TIMP2P16035 220 aa20.26■□□□□ 0.83
ATG4D-204ENST00000586417 ITGALP20701 1170 aa20.26■□□□□ 0.83
ATG4D-204ENST00000586417 PRKAA2P54646 552 aa20.26■□□□□ 0.83
ATG4D-204ENST00000586417 PDAP1Q13442 181 aaKnown RBP20.26■□□□□ 0.83
ATG4D-204ENST00000586417 CHRNA6Q15825 494 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms