RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 CCNFP41002 786 aa12.57□□□□□ -0.4
VMP1-202ENST00000585847 DCDC1P59894 354 aa12.57□□□□□ -0.4
VMP1-202ENST00000585847 MTM1Q13496 603 aa12.57□□□□□ -0.4
VMP1-202ENST00000585847 TYSND1Q2T9J0 566 aa12.57□□□□□ -0.4
VMP1-202ENST00000585847 ZNF284Q2VY69 593 aa12.57□□□□□ -0.4
VMP1-202ENST00000585847 KCTD16Q68DU8 428 aa12.57□□□□□ -0.4
VMP1-202ENST00000585847 KIAA0895LQ68EN5 471 aa12.57□□□□□ -0.4
VMP1-202ENST00000585847 ZNF470Q6ECI4 717 aa12.57□□□□□ -0.4
VMP1-202ENST00000585847 ESRP1Q6NXG1 681 aaKnown RBP12.57□□□□□ -0.4
VMP1-202ENST00000585847 RFLNAQ6ZTI6 216 aa12.57□□□□□ -0.4
VMP1-202ENST00000585847 STRA8Q7Z7C7 330 aa12.57□□□□□ -0.4
VMP1-202ENST00000585847 EXOC3L1Q86VI1 746 aa12.57□□□□□ -0.4
VMP1-202ENST00000585847 SRRM1Q8IYB3 904 aaKnown RBP12.57□□□□□ -0.4
VMP1-202ENST00000585847 TMEFF1Q8IYR6 380 aa12.57□□□□□ -0.4
VMP1-202ENST00000585847 OR4L1Q8NH43 312 aa12.57□□□□□ -0.4
VMP1-202ENST00000585847 MZB1Q8WU39 189 aa12.57□□□□□ -0.4
VMP1-202ENST00000585847 APOPT1Q96IL0 206 aa12.57□□□□□ -0.4
VMP1-202ENST00000585847 VPS39Q96JC1 886 aa12.57□□□□□ -0.4
VMP1-202ENST00000585847 ZC3H10Q96K80 434 aaKnown RBP12.57□□□□□ -0.4
VMP1-202ENST00000585847 SPACA7Q96KW9 195 aa12.57□□□□□ -0.4
VMP1-202ENST00000585847 GPR22Q99680 433 aa12.57□□□□□ -0.4
VMP1-202ENST00000585847 MCMBPQ9BTE3 642 aa12.57□□□□□ -0.4
VMP1-202ENST00000585847 GPR63Q9BZJ6 419 aa12.57□□□□□ -0.4
VMP1-202ENST00000585847 ZFYVE1Q9HBF4 777 aa12.57□□□□□ -0.4
VMP1-202ENST00000585847 CATSPERZQ9NTU4 200 aa12.57□□□□□ -0.4
VMP1-202ENST00000585847 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.57□□□□□ -0.4
VMP1-202ENST00000585847 ANKRD6Q9Y2G4 727 aa12.57□□□□□ -0.4
VMP1-202ENST00000585847 A0A1W2PQU0 124 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 IGLON5A6NGN9 336 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 H3BMM5 538 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 WNT9AO14904 365 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 LATO43561 262 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 TSPAN6O43657 245 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 MMP20O60882 483 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 APOA4P06727 396 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 ERVK-10P10266 1014 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 KRT4P19013 534 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 ITGALP20701 1170 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 XPAP23025 273 aaPredicted RBP12.56□□□□□ -0.4
VMP1-202ENST00000585847 ARNTP27540 789 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 VIPR1P32241 457 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 HPDP32754 393 aaPredicted RBP12.56□□□□□ -0.4
VMP1-202ENST00000585847 PTGER3P43115 390 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 MAGEA12P43365 314 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 CCR5P51681 352 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 POU4F1Q01851 419 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 RPL6Q02878 288 aaKnown RBP12.56□□□□□ -0.4
VMP1-202ENST00000585847 CREB5Q02930 508 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 PTSQ03393 145 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 SLC18A2Q05940 514 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 SEPT7Q16181 437 aaKnown RBP12.56□□□□□ -0.4
VMP1-202ENST00000585847 FASTKD1Q53R41 847 aaKnown RBP12.56□□□□□ -0.4
VMP1-202ENST00000585847 TAF1BQ53T94 588 aaPredicted RBP12.56□□□□□ -0.4
VMP1-202ENST00000585847 NEK5Q6P3R8 708 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 SLC36A4Q6YBV0 504 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 KYAT3Q6YP21 454 aaKnown RBP12.56□□□□□ -0.4
VMP1-202ENST00000585847 ZC3HC1Q86WB0 502 aaKnown RBP12.56□□□□□ -0.4
VMP1-202ENST00000585847 TRIM69Q86WT6 500 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 HORMAD1Q86X24 394 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 CILP2Q8IUL8 1156 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 TTC30BQ8N4P2 665 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 CADM4Q8NFZ8 388 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 OR6P1Q8NGX9 317 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 C1orf216Q8TAB5 229 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 KLK6Q92876 244 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 ULK4Q96C45 1275 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 BIRC7Q96CA5 298 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 COQ10AQ96MF6 247 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 TSNARE1Q96NA8 513 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 RTKNQ9BST9 563 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 WRAP53Q9BUR4 548 aaKnown RBP12.56□□□□□ -0.4
VMP1-202ENST00000585847 CCDC134Q9H6E4 229 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 PIH1D1Q9NWS0 290 aaKnown RBP12.56□□□□□ -0.4
VMP1-202ENST00000585847 PKD2L2Q9NZM6 624 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 IL17CQ9P0M4 197 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 TBK1Q9UHD2 729 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 FBXO5Q9UKT4 447 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.56□□□□□ -0.4
VMP1-202ENST00000585847 COQ6Q9Y2Z9 468 aa12.56□□□□□ -0.4
VMP1-202ENST00000585847 ZNF106Q9H2Y7 1883 aaKnown RBP12.55□□□□□ -0.4
VMP1-202ENST00000585847 EPG5Q9HCE0 2579 aa12.55□□□□□ -0.4
VMP1-202ENST00000585847 TBC1D3DA0A087WVF3 549 aa12.55□□□□□ -0.4
VMP1-202ENST00000585847 TBC1D3IA0A087WXS9 549 aa12.55□□□□□ -0.4
VMP1-202ENST00000585847 TBC1D3EA0A087X179 549 aa12.55□□□□□ -0.4
VMP1-202ENST00000585847 TBC1D3KA0A087X1G2 549 aa12.55□□□□□ -0.4
VMP1-202ENST00000585847 TBC1D3FA6NER0 549 aaPredicted RBP12.55□□□□□ -0.4
VMP1-202ENST00000585847 LRRC72A6NJI9 287 aa12.55□□□□□ -0.4
VMP1-202ENST00000585847 CXorf49A8MYA2 514 aaPredicted RBP12.55□□□□□ -0.4
VMP1-202ENST00000585847 TBC1D3LB9A6J9 549 aa12.55□□□□□ -0.4
VMP1-202ENST00000585847 TRIM49D1C9J1S8 452 aa12.55□□□□□ -0.4
VMP1-202ENST00000585847 RAD51BO15315 384 aa12.55□□□□□ -0.4
VMP1-202ENST00000585847 CD3EAPO15446 510 aaKnown RBP12.55□□□□□ -0.4
VMP1-202ENST00000585847 SHOX2O60902 331 aaPredicted RBP12.55□□□□□ -0.4
VMP1-202ENST00000585847 GLRA3O75311 464 aa12.55□□□□□ -0.4
VMP1-202ENST00000585847 PCDH8O95206 1070 aa12.55□□□□□ -0.4
VMP1-202ENST00000585847 CLDN7O95471 211 aa12.55□□□□□ -0.4
VMP1-202ENST00000585847 PYGLP06737 847 aa12.55□□□□□ -0.4
VMP1-202ENST00000585847 TBC1D3HP0C7X1 549 aa12.55□□□□□ -0.4
VMP1-202ENST00000585847 C6P13671 934 aa12.55□□□□□ -0.4
VMP1-202ENST00000585847 PMLP29590 882 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms