RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 RTP4Q96DX8 246 aa14.86□□□□□ -0.03
VAPA-209ENST00000585042 RAD18Q9NS91 495 aa14.86□□□□□ -0.03
VAPA-209ENST00000585042 TMEM9Q9P0T7 183 aa14.86□□□□□ -0.03
VAPA-209ENST00000585042 TBC1D29Q9UFV1 150 aa14.86□□□□□ -0.03
VAPA-209ENST00000585042 LUC7L2Q9Y383 392 aaKnown RBP14.86□□□□□ -0.03
VAPA-209ENST00000585042 TMEM184BQ9Y519 407 aaPredicted RBP14.86□□□□□ -0.03
VAPA-209ENST00000585042 TRBV23OR9-2A0A075B6M9 112 aa14.85□□□□□ -0.03
VAPA-209ENST00000585042 C1orf232A0A0U1RR37 186 aa14.85□□□□□ -0.03
VAPA-209ENST00000585042 ZNF487B1APH4 448 aa14.85□□□□□ -0.03
VAPA-209ENST00000585042 NUAK1O60285 661 aa14.85□□□□□ -0.03
VAPA-209ENST00000585042 EML2O95834 649 aa14.85□□□□□ -0.03
VAPA-209ENST00000585042 ATP1A1P05023 1023 aaKnown RBP14.85□□□□□ -0.03
VAPA-209ENST00000585042 MPSTP25325 297 aa14.85□□□□□ -0.03
VAPA-209ENST00000585042 CCR10P46092 362 aa14.85□□□□□ -0.03
VAPA-209ENST00000585042 UBASH3AP57075 661 aa14.85□□□□□ -0.03
VAPA-209ENST00000585042 ABHD18Q0P651 414 aa14.85□□□□□ -0.03
VAPA-209ENST00000585042 QPCTQ16769 361 aa14.85□□□□□ -0.03
VAPA-209ENST00000585042 ANKS6Q68DC2 871 aa14.85□□□□□ -0.03
VAPA-209ENST00000585042 PDPK2PQ6A1A2 396 aa14.85□□□□□ -0.03
VAPA-209ENST00000585042 VSIG1Q86XK7 387 aa14.85□□□□□ -0.03
VAPA-209ENST00000585042 CCDC13Q8IYE1 715 aa14.85□□□□□ -0.03
VAPA-209ENST00000585042 CCNYQ8ND76 341 aa14.85□□□□□ -0.03
VAPA-209ENST00000585042 LPCAT1Q8NF37 534 aa14.85□□□□□ -0.03
VAPA-209ENST00000585042 ZNF564Q8TBZ8 553 aaPredicted RBP14.85□□□□□ -0.03
VAPA-209ENST00000585042 PMEPA1Q969W9 287 aa14.85□□□□□ -0.03
VAPA-209ENST00000585042 SMIM14Q96QK8 99 aa14.85□□□□□ -0.03
VAPA-209ENST00000585042 XPO4Q9C0E2 1151 aaKnown RBP14.85□□□□□ -0.03
VAPA-209ENST00000585042 CBX8Q9HC52 389 aa14.85□□□□□ -0.03
VAPA-209ENST00000585042 TRIM39Q9HCM9 518 aa14.85□□□□□ -0.03
VAPA-209ENST00000585042 OAS3Q9Y6K5 1087 aaKnown RBP14.85□□□□□ -0.03
VAPA-209ENST00000585042 UBR5O95071 2799 aaPredicted RBP14.85□□□□□ -0.03
VAPA-209ENST00000585042 LILRA5A6NI73 299 aa14.84□□□□□ -0.03
VAPA-209ENST00000585042 TOX3O15405 576 aaPredicted RBP14.84□□□□□ -0.03
VAPA-209ENST00000585042 GRID2O43424 1007 aa14.84□□□□□ -0.03
VAPA-209ENST00000585042 HLA-DQB2P05538 268 aa14.84□□□□□ -0.03
VAPA-209ENST00000585042 H2AFZP0C0S5 128 aa14.84□□□□□ -0.03
VAPA-209ENST00000585042 ANKRD34CP0C6C1 535 aa14.84□□□□□ -0.03
VAPA-209ENST00000585042 XRCC1P18887 633 aaPredicted RBP14.84□□□□□ -0.03
VAPA-209ENST00000585042 DCDC1P59894 354 aa14.84□□□□□ -0.03
VAPA-209ENST00000585042 FANCCQ00597 558 aa14.84□□□□□ -0.03
VAPA-209ENST00000585042 MC1RQ01726 317 aa14.84□□□□□ -0.03
VAPA-209ENST00000585042 SLC10A2Q12908 348 aaPredicted RBP14.84□□□□□ -0.03
VAPA-209ENST00000585042 KCNAB2Q13303 367 aa14.84□□□□□ -0.03
VAPA-209ENST00000585042 MAP7Q14244 749 aa14.84□□□□□ -0.03
VAPA-209ENST00000585042 H2AFVQ71UI9 128 aa14.84□□□□□ -0.03
VAPA-209ENST00000585042 PHYKPLQ8IUZ5 450 aa14.84□□□□□ -0.03
VAPA-209ENST00000585042 PQLC3Q8N755 202 aa14.84□□□□□ -0.03
VAPA-209ENST00000585042 ZNF830Q96NB3 372 aaPredicted RBP14.84□□□□□ -0.03
VAPA-209ENST00000585042 RNF157Q96PX1 679 aa14.84□□□□□ -0.03
VAPA-209ENST00000585042 SRPK1Q96SB4 655 aaKnown RBP14.84□□□□□ -0.03
VAPA-209ENST00000585042 ZSCAN5AQ9BUG6 496 aa14.84□□□□□ -0.03
VAPA-209ENST00000585042 ZMYND15Q9H091 742 aa14.84□□□□□ -0.03
VAPA-209ENST00000585042 GPN2Q9H9Y4 310 aaPredicted RBP14.84□□□□□ -0.03
VAPA-209ENST00000585042 ZFYVE1Q9HBF4 777 aa14.84□□□□□ -0.03
VAPA-209ENST00000585042 MAGEE1Q9HCI5 957 aa14.84□□□□□ -0.03
VAPA-209ENST00000585042 DTLQ9NZJ0 730 aa14.84□□□□□ -0.03
VAPA-209ENST00000585042 NFKBIL1Q9UBC1 381 aaPredicted RBP14.84□□□□□ -0.03
VAPA-209ENST00000585042 CPNE7Q9UBL6 633 aa14.84□□□□□ -0.03
VAPA-209ENST00000585042 NENFQ9UMX5 172 aa14.84□□□□□ -0.03
VAPA-209ENST00000585042 TTLL3Q9Y4R7 772 aa14.84□□□□□ -0.03
VAPA-209ENST00000585042 FADS2P1A8MWK0 482 aa14.83□□□□□ -0.04
VAPA-209ENST00000585042 PYCARD-AS1I3L0S3 204 aa14.83□□□□□ -0.04
VAPA-209ENST00000585042 CHUKO15111 745 aa14.83□□□□□ -0.04
VAPA-209ENST00000585042 POLR1CO15160 346 aaPredicted RBP14.83□□□□□ -0.04
VAPA-209ENST00000585042 JCHAINP01591 159 aa14.83□□□□□ -0.04
VAPA-209ENST00000585042 TPM3P06753 285 aa14.83□□□□□ -0.04
VAPA-209ENST00000585042 MMP2P08253 660 aa14.83□□□□□ -0.04
VAPA-209ENST00000585042 KDELR1P24390 212 aa14.83□□□□□ -0.04
VAPA-209ENST00000585042 HNRNPH3P31942 346 aaKnown RBP14.83□□□□□ -0.04
VAPA-209ENST00000585042 NOP2P46087 812 aaKnown RBP14.83□□□□□ -0.04
VAPA-209ENST00000585042 PPM1FP49593 454 aaPredicted RBP14.83□□□□□ -0.04
VAPA-209ENST00000585042 POLE2P56282 527 aa14.83□□□□□ -0.04
VAPA-209ENST00000585042 IFI35P80217 286 aaPredicted RBP14.83□□□□□ -0.04
VAPA-209ENST00000585042 GBE1Q04446 702 aa14.83□□□□□ -0.04
VAPA-209ENST00000585042 PPIDQ08752 370 aaKnown RBP14.83□□□□□ -0.04
VAPA-209ENST00000585042 NFATC2Q13469 925 aa14.83□□□□□ -0.04
VAPA-209ENST00000585042 SLC14A2Q15849 920 aa14.83□□□□□ -0.04
VAPA-209ENST00000585042 LUZP1Q86V48 1076 aa14.83□□□□□ -0.04
VAPA-209ENST00000585042 ZNF761Q86XN6 746 aaPredicted RBP14.83□□□□□ -0.04
VAPA-209ENST00000585042 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.83□□□□□ -0.04
VAPA-209ENST00000585042 BRD8Q9H0E9 1235 aa14.83□□□□□ -0.04
VAPA-209ENST00000585042 CTTNBP2NLQ9P2B4 639 aa14.83□□□□□ -0.04
VAPA-209ENST00000585042 ATXN10Q9UBB4 475 aa14.83□□□□□ -0.04
VAPA-209ENST00000585042 KCNK6Q9Y257 313 aa14.83□□□□□ -0.04
VAPA-209ENST00000585042 PRKAB1Q9Y478 270 aa14.83□□□□□ -0.04
VAPA-209ENST00000585042 PCYT1BQ9Y5K3 369 aaPredicted RBP14.83□□□□□ -0.04
VAPA-209ENST00000585042 ADGRG1Q9Y653 693 aa14.83□□□□□ -0.04
VAPA-209ENST00000585042 A8MU76 341 aa14.82□□□□□ -0.04
VAPA-209ENST00000585042 VEGFDO43915 354 aa14.82□□□□□ -0.04
VAPA-209ENST00000585042 SLC25A14O95258 325 aaPredicted RBP14.82□□□□□ -0.04
VAPA-209ENST00000585042 C9P02748 559 aa14.82□□□□□ -0.04
VAPA-209ENST00000585042 ACP5P13686 325 aa14.82□□□□□ -0.04
VAPA-209ENST00000585042 CD86P42081 329 aa14.82□□□□□ -0.04
VAPA-209ENST00000585042 UBE2IP63279 158 aaKnown RBP14.82□□□□□ -0.04
VAPA-209ENST00000585042 NFKB2Q00653 900 aa14.82□□□□□ -0.04
VAPA-209ENST00000585042 SNAP47Q5SQN1 464 aa14.82□□□□□ -0.04
VAPA-209ENST00000585042 TMC3Q7Z5M5 1100 aa14.82□□□□□ -0.04
VAPA-209ENST00000585042 TRAM1L1Q8N609 369 aa14.82□□□□□ -0.04
VAPA-209ENST00000585042 CNTD1Q8N815 330 aa14.82□□□□□ -0.04
VAPA-209ENST00000585042 CPLX3Q8WVH0 158 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms