RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 GPR22Q99680 433 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 IL23AQ9NPF7 189 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 B4GALT6Q9UBX8 382 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 KLQ9UEF7 1012 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 DGKBQ9Y6T7 804 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 MAGEB16A2A368 324 aa10.21□□□□□ -0.77
RFFL-212ENST00000584655 CCDC22O60826 627 aa10.21□□□□□ -0.77
RFFL-212ENST00000584655 COPAP53621 1224 aa10.21□□□□□ -0.77
RFFL-212ENST00000584655 ZRSR2Q15696 482 aaKnown RBP10.21□□□□□ -0.77
RFFL-212ENST00000584655 ATP13A5Q4VNC0 1218 aa10.21□□□□□ -0.77
RFFL-212ENST00000584655 LPCAT4Q643R3 524 aa10.21□□□□□ -0.77
RFFL-212ENST00000584655 RAB44Q7Z6P3 723 aaPredicted RBP10.21□□□□□ -0.77
RFFL-212ENST00000584655 GPSM1Q86YR5 675 aa10.21□□□□□ -0.77
RFFL-212ENST00000584655 TRIM42Q8IWZ5 723 aa10.21□□□□□ -0.77
RFFL-212ENST00000584655 GRAMD1AQ96CP6 724 aa10.21□□□□□ -0.77
RFFL-212ENST00000584655 C3orf30Q96M34 536 aa10.21□□□□□ -0.77
RFFL-212ENST00000584655 TSGA13Q96PP4 275 aa10.21□□□□□ -0.77
RFFL-212ENST00000584655 TBCDQ9BTW9 1192 aa10.21□□□□□ -0.77
RFFL-212ENST00000584655 VPS45Q9NRW7 570 aa10.21□□□□□ -0.77
RFFL-212ENST00000584655 ASXL3Q9C0F0 2248 aa10.21□□□□□ -0.77
RFFL-212ENST00000584655 CLASP2O75122 1294 aaKnown RBP10.21□□□□□ -0.78
RFFL-212ENST00000584655 VPS26AO75436 327 aa10.21□□□□□ -0.78
RFFL-212ENST00000584655 FSBPO95073 299 aa10.21□□□□□ -0.78
RFFL-212ENST00000584655 OAS1P00973 400 aaKnown RBP10.21□□□□□ -0.78
RFFL-212ENST00000584655 BMPR1AP36894 532 aa10.21□□□□□ -0.78
RFFL-212ENST00000584655 YBEYP58557 167 aaPredicted RBP10.21□□□□□ -0.78
RFFL-212ENST00000584655 LIPMQ5VYY2 423 aa10.21□□□□□ -0.78
RFFL-212ENST00000584655 ADCK2Q7Z695 626 aa10.21□□□□□ -0.78
RFFL-212ENST00000584655 CCNJLQ8IV13 435 aa10.21□□□□□ -0.78
RFFL-212ENST00000584655 PDZD8Q8NEN9 1154 aa10.21□□□□□ -0.78
RFFL-212ENST00000584655 METTL6Q8TCB7 284 aa10.21□□□□□ -0.78
RFFL-212ENST00000584655 ZNF398Q8TD17 642 aa10.21□□□□□ -0.78
RFFL-212ENST00000584655 ADAMTS19Q8TE59 1207 aa10.21□□□□□ -0.78
RFFL-212ENST00000584655 RAD9AQ99638 391 aa10.21□□□□□ -0.78
RFFL-212ENST00000584655 SAR1AQ9NR31 198 aa10.21□□□□□ -0.78
RFFL-212ENST00000584655 SLC31A1O15431 190 aa10.21□□□□□ -0.78
RFFL-212ENST00000584655 MMP20O60882 483 aa10.21□□□□□ -0.78
RFFL-212ENST00000584655 FGF1P05230 155 aa10.21□□□□□ -0.78
RFFL-212ENST00000584655 CTSAP10619 480 aa10.21□□□□□ -0.78
RFFL-212ENST00000584655 HGFP14210 728 aa10.21□□□□□ -0.78
RFFL-212ENST00000584655 PTGER1P34995 402 aa10.21□□□□□ -0.78
RFFL-212ENST00000584655 RAD51Q06609 339 aa10.21□□□□□ -0.78
RFFL-212ENST00000584655 TBL3Q12788 808 aaKnown RBP10.21□□□□□ -0.78
RFFL-212ENST00000584655 GRB7Q14451 532 aa10.21□□□□□ -0.78
RFFL-212ENST00000584655 ARHGAP15Q53QZ3 475 aa10.21□□□□□ -0.78
RFFL-212ENST00000584655 C6orf163Q5TEZ5 329 aa10.21□□□□□ -0.78
RFFL-212ENST00000584655 IL27RAQ6UWB1 636 aa10.21□□□□□ -0.78
RFFL-212ENST00000584655 MRPL43Q8N983 215 aaKnown RBP10.21□□□□□ -0.78
RFFL-212ENST00000584655 GPR156Q8NFN8 814 aa10.21□□□□□ -0.78
RFFL-212ENST00000584655 SPPL3Q8TCT6 385 aa10.21□□□□□ -0.78
RFFL-212ENST00000584655 CALML6Q8TD86 181 aa10.21□□□□□ -0.78
RFFL-212ENST00000584655 LRCH3Q96II8 777 aa10.21□□□□□ -0.78
RFFL-212ENST00000584655 NOL11Q9H8H0 719 aaKnown RBP10.21□□□□□ -0.78
RFFL-212ENST00000584655 FARSBQ9NSD9 589 aaKnown RBP10.21□□□□□ -0.78
RFFL-212ENST00000584655 SIRPGQ9P1W8 387 aa10.21□□□□□ -0.78
RFFL-212ENST00000584655 ZNF180Q9UJW8 692 aa10.21□□□□□ -0.78
RFFL-212ENST00000584655 INVSQ9Y283 1065 aa10.21□□□□□ -0.78
RFFL-212ENST00000584655 ZNF711Q9Y462 761 aa10.21□□□□□ -0.78
RFFL-212ENST00000584655 TMEM189-UBE2V1I3L0A0 370 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 PIP5K1BO14986 540 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 KDELR3O43731 214 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 ABLIM3O94929 683 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 IGSF6O95976 241 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 PABPC1P11940 636 aaKnown RBP10.2□□□□□ -0.78
RFFL-212ENST00000584655 SERPINA4P29622 427 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 ADRA1AP35348 466 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 PSMD8P48556 350 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 TSNAXIP1Q2TAA8 658 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 ACSBG2Q5FVE4 666 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 FBXL19Q6PCT2 694 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 TRMT11Q7Z4G4 463 aaKnown RBP10.2□□□□□ -0.78
RFFL-212ENST00000584655 GPR26Q8NDV2 337 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 C1orf74Q96LT6 269 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 TSPAN18Q96SJ8 248 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 TMEM175Q9BSA9 504 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 ARL15Q9NXU5 204 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 DONSONQ9NYP3 566 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 PRKAG3Q9UGI9 489 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 FAM149AA5PLN7 773 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 GSC2O15499 205 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 ECI2O75521 394 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 KLHL2O95198 593 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 GSRP00390 522 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 NR6A1Q15406 480 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 PREPLQ4J6C6 727 aaPredicted RBP10.2□□□□□ -0.78
RFFL-212ENST00000584655 RALGPS2Q86X27 583 aaPredicted RBP10.2□□□□□ -0.78
RFFL-212ENST00000584655 YAF2Q8IY57 180 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 STK40Q8N2I9 435 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 PNPT1Q8TCS8 783 aaKnown RBP10.2□□□□□ -0.78
RFFL-212ENST00000584655 DCUN1D1Q96GG9 259 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 BTBD10Q9BSF8 475 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 RIOK2Q9BVS4 552 aaKnown RBP10.2□□□□□ -0.78
RFFL-212ENST00000584655 KLHL25Q9H0H3 589 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 CDH19Q9H159 772 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 BRD9Q9H8M2 597 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 EIF2B3Q9NR50 452 aaKnown RBP10.2□□□□□ -0.78
RFFL-212ENST00000584655 CLDND1Q9NY35 253 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 SLC25A13Q9UJS0 675 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 CA5BQ9Y2D0 317 aa10.2□□□□□ -0.78
RFFL-212ENST00000584655 SQORQ9Y6N5 450 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms