RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 PRAMEF14Q5SWL7 426 aa15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 TSTD2Q5T7W7 516 aa15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 UNQ6494/PRO21346Q6UXR6 183 aa15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 CCNI2Q6ZMN8 369 aaPredicted RBP15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 RFLNAQ6ZTI6 216 aa15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 Q6ZVL8 140 aa15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 ZNF765Q7L2R6 523 aa15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 NLRP9Q7RTR0 991 aa15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 RAB44Q7Z6P3 723 aaPredicted RBP15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 CCDC25Q86WR0 208 aa15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 IGDCC3Q8IVU1 814 aa15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 NRSN1Q8IZ57 195 aa15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 OR4K2Q8NGD2 314 aa15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 OR13C4Q8NGS5 318 aa15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 SAP25Q8TEE9 199 aa15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 PEX13Q92968 403 aa15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 STAMBPL1Q96FJ0 436 aa15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 ZNF778Q96MU6 729 aa15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 CDC6Q99741 560 aa15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 EBNA1BP2Q99848 306 aaKnown RBP15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 TSPYL1Q9H0U9 437 aa15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 BPIFA1Q9NP55 256 aa15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 SAYSD1Q9NPB0 183 aa15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 NLE1Q9NVX2 485 aaPredicted RBP15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 PKD2L2Q9NZM6 624 aa15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 SAMD15Q9P1V8 674 aa15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 RIMKLBQ9ULI2 386 aa15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 MSRB2Q9Y3D2 182 aa15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 PKP3Q9Y446 797 aa15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 MAD1L1Q9Y6D9 718 aa15.88■□□□□ 0.13
CSNK1D-223ENST00000584472 FAM237BA0A1B0GVD1 139 aa15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 CCDC78A2IDD5 438 aa15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 GOLGA8CPA6NN73 597 aa15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 CSF2P04141 144 aa15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 PCCBP05166 539 aa15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 TSHRP16473 764 aa15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 BPIP17213 487 aa15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 HTR1BP28222 390 aa15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 NMBRP28336 390 aa15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 HNRNPKP61978 463 aaKnown RBP eCLIP15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 TMPRSS15P98073 1019 aa15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 IL9RQ01113 521 aa15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 ACVR1Q04771 509 aa15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 NFATC4Q14934 902 aa15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 SKIDA1Q1XH10 827 aa15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 HP1BP3Q5SSJ5 553 aaPredicted RBP15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 TPRG1LQ5T0D9 272 aa15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 PNCKQ6P2M8 343 aa15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 KDM7AQ6ZMT4 941 aa15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 CEP128Q6ZU80 1094 aa15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 TMEM135Q86UB9 458 aa15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 NLRP8Q86W28 1048 aa15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 ANKMY2Q8IV38 441 aa15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 GSPT2Q8IYD1 628 aaKnown RBP15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 ZBED8Q8IZ13 594 aa15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 PLA2G15Q8NCC3 412 aa15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 FBXO36Q8NEA4 188 aa15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 OR13J1Q8NGT2 312 aa15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 ADAMTS14Q8WXS8 1223 aa15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.87■□□□□ 0.134e-8■■■■■ 30.1
CSNK1D-223ENST00000584472 GATA6Q92908 595 aa15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 DNAJC1Q96KC8 554 aaKnown RBP15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 TRIM56Q9BRZ2 755 aaKnown RBP15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 NAT9Q9BTE0 207 aa15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 APOOQ9BUR5 198 aa15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 SCNM1Q9BWG6 230 aa15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 PARD6BQ9BYG5 372 aa15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 WDR26Q9H7D7 661 aa15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 TREX1Q9NSU2 369 aa15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 DNAJC28Q9NX36 388 aa15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 NFKBIL1Q9UBC1 381 aaPredicted RBP15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 SLC2A6Q9UGQ3 507 aa15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 CHMP2BQ9UQN3 213 aa15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 APOBEC2Q9Y235 224 aaKnown RBP15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 COL5A1P20908 1838 aaPredicted RBP15.87■□□□□ 0.13
CSNK1D-223ENST00000584472 ZZEF1O43149 2961 aa15.86■□□□□ 0.13
CSNK1D-223ENST00000584472 SPEGQ15772 3267 aa15.86■□□□□ 0.13
CSNK1D-223ENST00000584472 SPAARA0A1B0GVQ0 90 aa15.86■□□□□ 0.13
CSNK1D-223ENST00000584472 H3BM21 787 aa15.86■□□□□ 0.13
CSNK1D-223ENST00000584472 H7C0S8 307 aa15.86■□□□□ 0.13
CSNK1D-223ENST00000584472 K7ESM1 405 aa15.86■□□□□ 0.13
CSNK1D-223ENST00000584472 CACNB4O00305 520 aaPredicted RBP15.86■□□□□ 0.13
CSNK1D-223ENST00000584472 USP1O94782 785 aa15.86■□□□□ 0.13
CSNK1D-223ENST00000584472 DKK1O94907 266 aa15.86■□□□□ 0.13
CSNK1D-223ENST00000584472 PYGLP06737 847 aa15.86■□□□□ 0.13
CSNK1D-223ENST00000584472 PGAM1P18669 254 aa15.86■□□□□ 0.13
CSNK1D-223ENST00000584472 KELP23276 732 aa15.86■□□□□ 0.13
CSNK1D-223ENST00000584472 MCM3P25205 808 aa15.86■□□□□ 0.13
CSNK1D-223ENST00000584472 HADHAP40939 763 aa15.86■□□□□ 0.13
CSNK1D-223ENST00000584472 KIAA1024LP59773 190 aa15.86■□□□□ 0.13
CSNK1D-223ENST00000584472 CES3Q6UWW8 571 aa15.86■□□□□ 0.13
CSNK1D-223ENST00000584472 KANSL1Q7Z3B3 1105 aa15.86■□□□□ 0.13
CSNK1D-223ENST00000584472 RELL1Q8IUW5 271 aa15.86■□□□□ 0.13
CSNK1D-223ENST00000584472 CCNJLQ8IV13 435 aa15.86■□□□□ 0.13
CSNK1D-223ENST00000584472 GPR26Q8NDV2 337 aa15.86■□□□□ 0.13
CSNK1D-223ENST00000584472 MYRIPQ8NFW9 859 aa15.86■□□□□ 0.13
CSNK1D-223ENST00000584472 SETD7Q8WTS6 366 aaKnown RBP15.86■□□□□ 0.13
CSNK1D-223ENST00000584472 MFSD3Q96ES6 412 aa15.86■□□□□ 0.13
CSNK1D-223ENST00000584472 CDKN2AIPNLQ96HQ2 116 aa15.86■□□□□ 0.13
CSNK1D-223ENST00000584472 TBATAQ96M53 351 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms