RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 CERCAMQ5T4B2 595 aa11.07□□□□□ -0.64
CCDC47-206ENST00000584112 KCTD16Q68DU8 428 aa11.07□□□□□ -0.64
CCDC47-206ENST00000584112 NYAP1Q6ZVC0 841 aa11.07□□□□□ -0.64
CCDC47-206ENST00000584112 Q6ZVL8 140 aa11.07□□□□□ -0.64
CCDC47-206ENST00000584112 RAB11FIP2Q7L804 512 aa11.07□□□□□ -0.64
CCDC47-206ENST00000584112 HSD11B1LQ7Z5J1 315 aa11.07□□□□□ -0.64
CCDC47-206ENST00000584112 TSPAN33Q86UF1 283 aa11.07□□□□□ -0.64
CCDC47-206ENST00000584112 VSIG1Q86XK7 387 aa11.07□□□□□ -0.64
CCDC47-206ENST00000584112 DTX1Q86Y01 620 aa11.07□□□□□ -0.64
CCDC47-206ENST00000584112 VSTM4Q8IW00 320 aa11.07□□□□□ -0.64
CCDC47-206ENST00000584112 RHOT2Q8IXI1 618 aa11.07□□□□□ -0.64
CCDC47-206ENST00000584112 RAVER1Q8IY67 606 aaKnown RBP11.07□□□□□ -0.64
CCDC47-206ENST00000584112 PELI3Q8N2H9 469 aa11.07□□□□□ -0.64
CCDC47-206ENST00000584112 TTC13Q8NBP0 860 aa11.07□□□□□ -0.64
CCDC47-206ENST00000584112 CCNYQ8ND76 341 aa11.07□□□□□ -0.64
CCDC47-206ENST00000584112 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.07□□□□□ -0.64
CCDC47-206ENST00000584112 HDAC11Q96DB2 347 aa11.07□□□□□ -0.64
CCDC47-206ENST00000584112 CCDC42Q96M95 316 aa11.07□□□□□ -0.64
CCDC47-206ENST00000584112 TMEM74Q96NL1 305 aa11.07□□□□□ -0.64
CCDC47-206ENST00000584112 GSDMCQ9BYG8 508 aa11.07□□□□□ -0.64
CCDC47-206ENST00000584112 FRMD8Q9BZ67 464 aaPredicted RBP11.07□□□□□ -0.64
CCDC47-206ENST00000584112 STRADBQ9C0K7 418 aa11.07□□□□□ -0.64
CCDC47-206ENST00000584112 LRRN3Q9H3W5 708 aa11.07□□□□□ -0.64
CCDC47-206ENST00000584112 TSPY26PQ9H489 355 aa11.07□□□□□ -0.64
CCDC47-206ENST00000584112 DPEP2Q9H4A9 486 aa11.07□□□□□ -0.64
CCDC47-206ENST00000584112 CARS2Q9HA77 564 aaKnown RBP11.07□□□□□ -0.64
CCDC47-206ENST00000584112 ABHD10Q9NUJ1 306 aa11.07□□□□□ -0.64
CCDC47-206ENST00000584112 RBM22Q9NW64 420 aaKnown RBP eCLIP11.07□□□□□ -0.642e-7■■■□□ 17.6
CCDC47-206ENST00000584112 TRNAU1APQ9NX07 287 aaKnown RBP11.07□□□□□ -0.64
CCDC47-206ENST00000584112 APPL1Q9UKG1 709 aa11.07□□□□□ -0.64
CCDC47-206ENST00000584112 RPL26L1Q9UNX3 145 aaKnown RBP11.07□□□□□ -0.64
CCDC47-206ENST00000584112 LRRD1A4D1F6 860 aa11.06□□□□□ -0.64
CCDC47-206ENST00000584112 EFCAB7A8K855 629 aa11.06□□□□□ -0.64
CCDC47-206ENST00000584112 NVLO15381 856 aaKnown RBP11.06□□□□□ -0.64
CCDC47-206ENST00000584112 ZW10O43264 779 aa11.06□□□□□ -0.64
CCDC47-206ENST00000584112 NUDT21O43809 227 aaKnown RBP11.06□□□□□ -0.64
CCDC47-206ENST00000584112 MFAP3LO75121 409 aa11.06□□□□□ -0.64
CCDC47-206ENST00000584112 FAM155BO75949 473 aa11.06□□□□□ -0.64
CCDC47-206ENST00000584112 PDHA1P08559 390 aa11.06□□□□□ -0.64
CCDC47-206ENST00000584112 ITIH1P19827 911 aa11.06□□□□□ -0.64
CCDC47-206ENST00000584112 KDELR1P24390 212 aa11.06□□□□□ -0.64
CCDC47-206ENST00000584112 CCL7P80098 99 aa11.06□□□□□ -0.64
CCDC47-206ENST00000584112 DSC2Q02487 901 aa11.06□□□□□ -0.64
CCDC47-206ENST00000584112 GBE1Q04446 702 aa11.06□□□□□ -0.64
CCDC47-206ENST00000584112 ODF2Q5BJF6 829 aa11.06□□□□□ -0.64
CCDC47-206ENST00000584112 LRRC66Q68CR7 880 aa11.06□□□□□ -0.64
CCDC47-206ENST00000584112 ADAMTSL4Q6UY14 1074 aa11.06□□□□□ -0.64
CCDC47-206ENST00000584112 ZNF765Q7L2R6 523 aa11.06□□□□□ -0.64
CCDC47-206ENST00000584112 TECPR1Q7Z6L1 1165 aa11.06□□□□□ -0.64
CCDC47-206ENST00000584112 NLRP8Q86W28 1048 aa11.06□□□□□ -0.64
CCDC47-206ENST00000584112 CPNE8Q86YQ8 564 aa11.06□□□□□ -0.64
CCDC47-206ENST00000584112 CCNJLQ8IV13 435 aa11.06□□□□□ -0.64
CCDC47-206ENST00000584112 CNGA4Q8IV77 575 aa11.06□□□□□ -0.64
CCDC47-206ENST00000584112 CCDC13Q8IYE1 715 aa11.06□□□□□ -0.64
CCDC47-206ENST00000584112 NRSN1Q8IZ57 195 aa11.06□□□□□ -0.64
CCDC47-206ENST00000584112 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.06□□□□□ -0.64
CCDC47-206ENST00000584112 PQLC3Q8N755 202 aa11.06□□□□□ -0.64
CCDC47-206ENST00000584112 SLC35G2Q8TBE7 412 aa11.06□□□□□ -0.64
CCDC47-206ENST00000584112 GPBAR1Q8TDU6 330 aa11.06□□□□□ -0.64
CCDC47-206ENST00000584112 AP2M1Q96CW1 435 aa11.06□□□□□ -0.64
CCDC47-206ENST00000584112 RNF157Q96PX1 679 aa11.06□□□□□ -0.64
CCDC47-206ENST00000584112 TDRD1Q9BXT4 1180 aaKnown RBP11.06□□□□□ -0.64
CCDC47-206ENST00000584112 MAK16Q9BXY0 300 aaKnown RBP11.06□□□□□ -0.64
CCDC47-206ENST00000584112 CDH19Q9H159 772 aa11.06□□□□□ -0.64
CCDC47-206ENST00000584112 NHEJ1Q9H9Q4 299 aaPredicted RBP11.06□□□□□ -0.64
CCDC47-206ENST00000584112 LRIT1Q9P2V4 623 aa11.06□□□□□ -0.64
CCDC47-206ENST00000584112 RABGEF1Q9UJ41 708 aa11.06□□□□□ -0.64
CCDC47-206ENST00000584112 CHKBQ9Y259 395 aa11.06□□□□□ -0.64
CCDC47-206ENST00000584112 SLC17A4Q9Y2C5 497 aa11.06□□□□□ -0.64
CCDC47-206ENST00000584112 PCDHB11Q9Y5F2 797 aa11.06□□□□□ -0.64
CCDC47-206ENST00000584112 A0A1W2PQM1 296 aa11.05□□□□□ -0.64
CCDC47-206ENST00000584112 DUX1O43812 170 aa11.05□□□□□ -0.64
CCDC47-206ENST00000584112 MTA2O94776 668 aa11.05□□□□□ -0.64
CCDC47-206ENST00000584112 HLA-DQB2P05538 268 aa11.05□□□□□ -0.64
CCDC47-206ENST00000584112 CEACAM5P06731 702 aa11.05□□□□□ -0.64
CCDC47-206ENST00000584112 IVLP07476 585 aa11.05□□□□□ -0.64
CCDC47-206ENST00000584112 PRKAR1AP10644 381 aa11.05□□□□□ -0.64
CCDC47-206ENST00000584112 ZFXP17010 805 aaPredicted RBP11.05□□□□□ -0.64
CCDC47-206ENST00000584112 CCKBRP32239 447 aa11.05□□□□□ -0.64
CCDC47-206ENST00000584112 ETV5P41161 510 aa11.05□□□□□ -0.64
CCDC47-206ENST00000584112 GNPDA1P46926 289 aa11.05□□□□□ -0.64
CCDC47-206ENST00000584112 STC1P52823 247 aa11.05□□□□□ -0.64
CCDC47-206ENST00000584112 PPIDQ08752 370 aaKnown RBP11.05□□□□□ -0.64
CCDC47-206ENST00000584112 SLC10A2Q12908 348 aaPredicted RBP11.05□□□□□ -0.64
CCDC47-206ENST00000584112 HLTFQ14527 1009 aaKnown RBP eCLIP11.05□□□□□ -0.64
CCDC47-206ENST00000584112 PRR30Q53SZ7 412 aaPredicted RBP11.05□□□□□ -0.64
CCDC47-206ENST00000584112 SPRED1Q7Z699 444 aa11.05□□□□□ -0.64
CCDC47-206ENST00000584112 EXD1Q8NHP7 514 aa11.05□□□□□ -0.64
CCDC47-206ENST00000584112 CCL4L1Q8NHW4 92 aa11.05□□□□□ -0.64
CCDC47-206ENST00000584112 ARRDC2Q8TBH0 407 aa11.05□□□□□ -0.64
CCDC47-206ENST00000584112 ZDHHC1Q8WTX9 485 aa11.05□□□□□ -0.64
CCDC47-206ENST00000584112 RAPGEF5Q92565 580 aa11.05□□□□□ -0.64
CCDC47-206ENST00000584112 TMEM159Q96B96 161 aa11.05□□□□□ -0.64
CCDC47-206ENST00000584112 C5orf34Q96MH7 638 aa11.05□□□□□ -0.64
CCDC47-206ENST00000584112 CHP1Q99653 195 aa11.05□□□□□ -0.64
CCDC47-206ENST00000584112 ABCG8Q9H221 673 aa11.05□□□□□ -0.64
CCDC47-206ENST00000584112 SUDS3Q9H7L9 328 aaPredicted RBP11.05□□□□□ -0.64
CCDC47-206ENST00000584112 PCDH9Q9HC56 1237 aa11.05□□□□□ -0.64
CCDC47-206ENST00000584112 SPTLC3Q9NUV7 552 aa11.05□□□□□ -0.64
CCDC47-206ENST00000584112 DTLQ9NZJ0 730 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms