RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 CDK3Q00526 305 aa5.3□□□□□ -1.56
VAPA-207ENST00000583879 FMO1Q01740 532 aa5.3□□□□□ -1.56
VAPA-207ENST00000583879 FOXD4Q12950 439 aaPredicted RBP5.3□□□□□ -1.56
VAPA-207ENST00000583879 RFTN1Q14699 578 aaPredicted RBP5.3□□□□□ -1.56
VAPA-207ENST00000583879 TPD52L1Q16890 204 aaPredicted RBP5.3□□□□□ -1.56
VAPA-207ENST00000583879 C11orf91Q3C1V1 193 aa5.3□□□□□ -1.56
VAPA-207ENST00000583879 ZFYVE27Q5T4F4 411 aa5.3□□□□□ -1.56
VAPA-207ENST00000583879 FHL5Q5TD97 284 aa5.3□□□□□ -1.56
VAPA-207ENST00000583879 TCTN3Q6NUS6 607 aa5.3□□□□□ -1.56
VAPA-207ENST00000583879 C16orf46Q6P387 395 aa5.3□□□□□ -1.56
VAPA-207ENST00000583879 WDR74Q6RFH5 385 aaPredicted RBP5.3□□□□□ -1.56
VAPA-207ENST00000583879 TRIM72Q6ZMU5 477 aa5.3□□□□□ -1.56
VAPA-207ENST00000583879 HEATR4Q86WZ0 1026 aa5.3□□□□□ -1.56
VAPA-207ENST00000583879 FAM114A1Q8IWE2 563 aa5.3□□□□□ -1.56
VAPA-207ENST00000583879 DTWD1Q8N5C7 304 aa5.3□□□□□ -1.56
VAPA-207ENST00000583879 LZTR1Q8N653 840 aa5.3□□□□□ -1.56
VAPA-207ENST00000583879 MLKLQ8NB16 471 aa5.3□□□□□ -1.56
VAPA-207ENST00000583879 OR10G6Q8NH81 332 aa5.3□□□□□ -1.56
VAPA-207ENST00000583879 SLC20A1Q8WUM9 679 aa5.3□□□□□ -1.56
VAPA-207ENST00000583879 STARD8Q92502 1023 aa5.3□□□□□ -1.56
VAPA-207ENST00000583879 NUS1Q96E22 293 aa5.3□□□□□ -1.56
VAPA-207ENST00000583879 CELF6Q96J87 481 aaKnown RBP5.3□□□□□ -1.56
VAPA-207ENST00000583879 NSMCE3Q96MG7 304 aa5.3□□□□□ -1.56
VAPA-207ENST00000583879 PCDHB18PQ96TA0 734 aa5.3□□□□□ -1.56
VAPA-207ENST00000583879 SLC38A3Q99624 504 aa5.3□□□□□ -1.56
VAPA-207ENST00000583879 C11orf70Q9BRQ4 267 aa5.3□□□□□ -1.56
VAPA-207ENST00000583879 APMAPQ9HDC9 416 aa5.3□□□□□ -1.56
VAPA-207ENST00000583879 PRDM8Q9NQV8 689 aa5.3□□□□□ -1.56
VAPA-207ENST00000583879 ADAM22Q9P0K1 906 aa5.3□□□□□ -1.56
VAPA-207ENST00000583879 KLHL42Q9P2K6 505 aa5.3□□□□□ -1.56
VAPA-207ENST00000583879 B4GALT6Q9UBX8 382 aa5.3□□□□□ -1.56
VAPA-207ENST00000583879 PLEKHB1Q9UF11 243 aaPredicted RBP5.3□□□□□ -1.56
VAPA-207ENST00000583879 VPS4AQ9UN37 437 aa5.3□□□□□ -1.56
VAPA-207ENST00000583879 TP53TG5Q9Y2B4 290 aa5.3□□□□□ -1.56
VAPA-207ENST00000583879 SLC17A4Q9Y2C5 497 aa5.3□□□□□ -1.56
VAPA-207ENST00000583879 PLEKHM1Q9Y4G2 1056 aa5.3□□□□□ -1.56
VAPA-207ENST00000583879 KCTD3Q9Y597 815 aa5.3□□□□□ -1.56
VAPA-207ENST00000583879 KCNMB2Q9Y691 235 aa5.3□□□□□ -1.56
VAPA-207ENST00000583879 KIF26BQ2KJY2 2108 aa5.3□□□□□ -1.56
VAPA-207ENST00000583879 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.29□□□□□ -1.56
VAPA-207ENST00000583879 TCRBV5S1A1TA0A578 114 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 MKRN2OSH3BPM6 223 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 PSMD11O00231 422 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 PES1O00541 588 aaKnown RBP5.29□□□□□ -1.56
VAPA-207ENST00000583879 CCP110O43303 1012 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 GADD45BO75293 160 aaPredicted RBP5.29□□□□□ -1.56
VAPA-207ENST00000583879 GFPT2O94808 682 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 HEXIM1O94992 359 aaKnown RBP5.29□□□□□ -1.56
VAPA-207ENST00000583879 AGFG2O95081 481 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 DLGAP3O95886 979 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 RECKO95980 971 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 CALB1P05937 261 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 CYP2A6P11509 494 aaPredicted RBP5.29□□□□□ -1.56
VAPA-207ENST00000583879 NR1D1P20393 614 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 F8A1P23610 371 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 VIPR1P32241 457 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 ETV3P41162 512 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 NOP2P46087 812 aaKnown RBP5.29□□□□□ -1.56
VAPA-207ENST00000583879 GPR1P46091 355 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 NSFP46459 744 aaKnown RBP5.29□□□□□ -1.56
VAPA-207ENST00000583879 PPM1FP49593 454 aaPredicted RBP5.29□□□□□ -1.56
VAPA-207ENST00000583879 COPB1P53618 953 aaKnown RBP5.29□□□□□ -1.56
VAPA-207ENST00000583879 TPI1P60174 286 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 AP1S1P61966 158 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 RPL7AP62424 266 aaKnown RBP5.29□□□□□ -1.56
VAPA-207ENST00000583879 DPTQ07507 201 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 IL10RBQ08334 325 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 SLC10A7Q0GE19 358 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 MAP7Q14244 749 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 ERV3-1Q14264 604 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 CNGA3Q16281 694 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 CAMK4Q16566 473 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 PYCR3Q53H96 274 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 SNAP47Q5SQN1 464 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.29□□□□□ -1.56
VAPA-207ENST00000583879 ATP1A1-AS1Q5TC04 95 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 DENND2CQ68D51 928 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 IYDQ6PHW0 289 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 Q6ZVL8 140 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 ASB18Q6ZVZ8 466 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 HSD11B1LQ7Z5J1 315 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 TECPR1Q7Z6L1 1165 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 ZNF761Q86XN6 746 aaPredicted RBP5.29□□□□□ -1.56
VAPA-207ENST00000583879 PHF13Q86YI8 300 aaPredicted RBP5.29□□□□□ -1.56
VAPA-207ENST00000583879 CCDC13Q8IYE1 715 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 SFRP1Q8N474 314 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 ESX1Q8N693 406 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 C3orf20Q8ND61 904 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 SLC37A2Q8TED4 501 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 NCSTNQ92542 709 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 SH3KBP1Q96B97 665 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 DTD2Q96FN9 168 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 SCRN2Q96FV2 425 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 PSKH2Q96QS6 385 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 OR2M4Q96R27 311 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 CINPQ9BW66 212 aaPredicted RBP5.29□□□□□ -1.56
VAPA-207ENST00000583879 DNAJB12Q9NXW2 375 aaKnown RBP5.29□□□□□ -1.56
VAPA-207ENST00000583879 PHTF1Q9UMS5 762 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 TMA7Q9Y2S6 64 aaKnown RBP5.29□□□□□ -1.56
VAPA-207ENST00000583879 TMEM98Q9Y2Y6 226 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms