RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 RNF224P0DH78 156 aa3.81□□□□□ -1.8
COPS3-217ENST00000583160 XBP1P17861 261 aa3.81□□□□□ -1.8
COPS3-217ENST00000583160 UBA7P41226 1012 aa3.81□□□□□ -1.8
COPS3-217ENST00000583160 TUBP50607 506 aa3.81□□□□□ -1.8
COPS3-217ENST00000583160 HSD17B4P51659 736 aa3.81□□□□□ -1.8
COPS3-217ENST00000583160 RUNX1T1Q06455 604 aa3.81□□□□□ -1.8
COPS3-217ENST00000583160 MAD2L1Q13257 205 aaPredicted RBP3.81□□□□□ -1.8
COPS3-217ENST00000583160 DCTN2Q13561 401 aaKnown RBP3.81□□□□□ -1.8
COPS3-217ENST00000583160 CXorf66Q5JRM2 361 aaPredicted RBP3.81□□□□□ -1.8
COPS3-217ENST00000583160 SFMBT2Q5VUG0 894 aa3.81□□□□□ -1.8
COPS3-217ENST00000583160 TSSK4Q6SA08 328 aa3.81□□□□□ -1.8
COPS3-217ENST00000583160 OR14L1PQ8NHC6 308 aa3.81□□□□□ -1.8
COPS3-217ENST00000583160 TAF15Q92804 592 aaKnown RBP eCLIP3.81□□□□□ -1.8
COPS3-217ENST00000583160 TMEM68Q96MH6 324 aa3.81□□□□□ -1.8
COPS3-217ENST00000583160 C17orf77Q96MU5 243 aa3.81□□□□□ -1.8
COPS3-217ENST00000583160 MOV10L1Q9BXT6 1211 aaKnown RBP3.81□□□□□ -1.8
COPS3-217ENST00000583160 EGLN1Q9GZT9 426 aa3.81□□□□□ -1.8
COPS3-217ENST00000583160 PAIP1Q9H074 479 aaKnown RBP3.81□□□□□ -1.8
COPS3-217ENST00000583160 LRMDAQ9H2I8 198 aa3.81□□□□□ -1.8
COPS3-217ENST00000583160 MARCH4Q9P2E8 410 aaPredicted RBP3.81□□□□□ -1.8
COPS3-217ENST00000583160 SLC13A4Q9UKG4 626 aa3.81□□□□□ -1.8
COPS3-217ENST00000583160 CUX2O14529 1486 aa3.8□□□□□ -1.8
COPS3-217ENST00000583160 SMIM1B2RUZ4 78 aa3.8□□□□□ -1.8
COPS3-217ENST00000583160 EIF3CLB5ME19 914 aaKnown RBP3.8□□□□□ -1.8
COPS3-217ENST00000583160 FAM90A26D6RGX4 464 aa3.8□□□□□ -1.8
COPS3-217ENST00000583160 BLOC1S5-TXNDC5H3BN57 136 aa3.8□□□□□ -1.8
COPS3-217ENST00000583160 ANKRD28O15084 1053 aa3.8□□□□□ -1.8
COPS3-217ENST00000583160 ZNF883P0CG24 379 aa3.8□□□□□ -1.8
COPS3-217ENST00000583160 ZNF23P17027 643 aa3.8□□□□□ -1.8
COPS3-217ENST00000583160 UGT1A1P22309 533 aa3.8□□□□□ -1.8
COPS3-217ENST00000583160 UBA1P22314 1058 aaKnown RBP3.8□□□□□ -1.8
COPS3-217ENST00000583160 AHRP35869 848 aa3.8□□□□□ -1.8
COPS3-217ENST00000583160 DHX8Q14562 1220 aaKnown RBP3.8□□□□□ -1.8
COPS3-217ENST00000583160 WDR38Q5JTN6 314 aa3.8□□□□□ -1.8
COPS3-217ENST00000583160 CDC73Q6P1J9 531 aa3.8□□□□□ -1.8
COPS3-217ENST00000583160 PLEKHM3Q6ZWE6 761 aa3.8□□□□□ -1.8
COPS3-217ENST00000583160 KRTAP7-1Q8IUC3 87 aa3.8□□□□□ -1.8
COPS3-217ENST00000583160 ADSSL1Q8N142 457 aa3.8□□□□□ -1.8
COPS3-217ENST00000583160 STPG4Q8N801 248 aa3.8□□□□□ -1.8
COPS3-217ENST00000583160 ZNF485Q8NCK3 441 aa3.8□□□□□ -1.8
COPS3-217ENST00000583160 DNAAF4Q8WXU2 420 aa3.8□□□□□ -1.8
COPS3-217ENST00000583160 TM9SF4Q92544 642 aa3.8□□□□□ -1.8
COPS3-217ENST00000583160 RRNAD1Q96FB5 475 aaKnown RBP3.8□□□□□ -1.8
COPS3-217ENST00000583160 RANBP17Q9H2T7 1088 aaKnown RBP3.8□□□□□ -1.8
COPS3-217ENST00000583160 SAGE1Q9NXZ1 904 aa3.8□□□□□ -1.8
COPS3-217ENST00000583160 OR14J1Q9UGF5 321 aa3.8□□□□□ -1.8
COPS3-217ENST00000583160 GJD2Q9UKL4 321 aa3.8□□□□□ -1.8
COPS3-217ENST00000583160 ARHGAP26Q9UNA1 814 aa3.8□□□□□ -1.8
COPS3-217ENST00000583160 LRRFIP2Q9Y608 721 aaKnown RBP3.8□□□□□ -1.8
COPS3-217ENST00000583160 CACNA1FO60840 1977 aa3.8□□□□□ -1.8
COPS3-217ENST00000583160 ATAD2BQ9ULI0 1458 aa3.79□□□□□ -1.8
COPS3-217ENST00000583160 KDM3AQ9Y4C1 1321 aa3.79□□□□□ -1.8
COPS3-217ENST00000583160 A0A1B0GU03 582 aa3.79□□□□□ -1.8
COPS3-217ENST00000583160 C1orf226A1L170 272 aa3.79□□□□□ -1.8
COPS3-217ENST00000583160 NKX2-2O95096 273 aa3.79□□□□□ -1.8
COPS3-217ENST00000583160 CAVIN2O95810 425 aa3.79□□□□□ -1.8
COPS3-217ENST00000583160 EPHA8P29322 1005 aaPredicted RBP3.79□□□□□ -1.8
COPS3-217ENST00000583160 TAF6P49848 677 aa3.79□□□□□ -1.8
COPS3-217ENST00000583160 KRTCAP3Q53RY4 240 aa3.79□□□□□ -1.8
COPS3-217ENST00000583160 INO80CQ6PI98 192 aaPredicted RBP3.79□□□□□ -1.8
COPS3-217ENST00000583160 CPXCR1Q8N123 301 aa3.79□□□□□ -1.8
COPS3-217ENST00000583160 ESX1Q8N693 406 aa3.79□□□□□ -1.8
COPS3-217ENST00000583160 ZNF248Q8NDW4 579 aa3.79□□□□□ -1.8
COPS3-217ENST00000583160 MYRIPQ8NFW9 859 aa3.79□□□□□ -1.8
COPS3-217ENST00000583160 PHF21AQ96BD5 680 aa3.79□□□□□ -1.8
COPS3-217ENST00000583160 NEUROD6Q96NK8 337 aa3.79□□□□□ -1.8
COPS3-217ENST00000583160 FSD1Q9BTV5 496 aa3.79□□□□□ -1.8
COPS3-217ENST00000583160 WASH6PQ9NQA3 447 aa3.79□□□□□ -1.8
COPS3-217ENST00000583160 ABI3Q9P2A4 366 aa3.79□□□□□ -1.8
COPS3-217ENST00000583160 ZNF624Q9P2J8 865 aaPredicted RBP3.79□□□□□ -1.8
COPS3-217ENST00000583160 SMARCA2P51531 1590 aa3.79□□□□□ -1.8
COPS3-217ENST00000583160 IGKV3D-15A0A087WSY6 115 aa3.78□□□□□ -1.8
COPS3-217ENST00000583160 OR5K3A6NET4 321 aa3.78□□□□□ -1.8
COPS3-217ENST00000583160 CIDEAO60543 219 aa3.78□□□□□ -1.8
COPS3-217ENST00000583160 BAG4O95429 457 aaKnown RBP3.78□□□□□ -1.8
COPS3-217ENST00000583160 TBX6O95947 436 aaPredicted RBP3.78□□□□□ -1.8
COPS3-217ENST00000583160 CHRNB4P30926 498 aa3.78□□□□□ -1.8
COPS3-217ENST00000583160 HARS2P49590 506 aaKnown RBP3.78□□□□□ -1.8
COPS3-217ENST00000583160 FRG1Q14331 258 aaKnown RBP3.78□□□□□ -1.8
COPS3-217ENST00000583160 CDONQ4KMG0 1287 aa3.78□□□□□ -1.8
COPS3-217ENST00000583160 PAPD4Q6PIY7 484 aaKnown RBP3.78□□□□□ -1.8
COPS3-217ENST00000583160 ARMC8Q8IUR7 673 aa3.78□□□□□ -1.8
COPS3-217ENST00000583160 CNTROBQ8N137 903 aa3.78□□□□□ -1.8
COPS3-217ENST00000583160 CNOT8Q9UFF9 292 aaKnown RBP3.78□□□□□ -1.8
COPS3-217ENST00000583160 KCNK7Q9Y2U2 307 aa3.78□□□□□ -1.8
COPS3-217ENST00000583160 MAU2Q9Y6X3 613 aa3.78□□□□□ -1.8
COPS3-217ENST00000583160 PRAG1Q86YV5 1406 aa3.78□□□□□ -1.8
COPS3-217ENST00000583160 SMARCA4P51532 1647 aa3.77□□□□□ -1.81
COPS3-217ENST00000583160 TP53BP1Q12888 1972 aaPredicted RBP3.77□□□□□ -1.81
COPS3-217ENST00000583160 A0A1W2PP11 408 aa3.77□□□□□ -1.81
COPS3-217ENST00000583160 A0A1W2PRG0 241 aa3.77□□□□□ -1.81
COPS3-217ENST00000583160 ERI2A8K979 691 aaKnown RBP3.77□□□□□ -1.81
COPS3-217ENST00000583160 UBL4AP11441 157 aa3.77□□□□□ -1.81
COPS3-217ENST00000583160 CSF2RAP15509 400 aa3.77□□□□□ -1.81
COPS3-217ENST00000583160 DRG2P55039 364 aaKnown RBP3.77□□□□□ -1.81
COPS3-217ENST00000583160 MLLT10P55197 1068 aa3.77□□□□□ -1.81
COPS3-217ENST00000583160 CDC16Q13042 620 aa3.77□□□□□ -1.81
COPS3-217ENST00000583160 ACVR2BQ13705 512 aa3.77□□□□□ -1.81
COPS3-217ENST00000583160 ZRSR2Q15696 482 aaKnown RBP3.77□□□□□ -1.81
COPS3-217ENST00000583160 TECRLQ5HYJ1 363 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms