RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 PI15O43692 258 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 FZD6O60353 706 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 HNRNPCL1O60812 293 aaKnown RBP9.23□□□□□ -0.93
SS18-220ENST00000582092 DIAPH2O60879 1101 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 DNAJC6O75061 913 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 SNNO75324 88 aaPredicted RBP9.23□□□□□ -0.93
SS18-220ENST00000582092 CLDN7O95471 211 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 ESR1P03372 595 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 S100BP04271 92 aaPredicted RBP9.23□□□□□ -0.93
SS18-220ENST00000582092 CYP17A1P05093 508 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 DCNP07585 359 aaKnown RBP9.23□□□□□ -0.93
SS18-220ENST00000582092 DLDP09622 509 aaKnown RBP9.23□□□□□ -0.93
SS18-220ENST00000582092 FDXRP22570 491 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 GKP32189 559 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 SERPINB5P36952 375 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 RPS9P46781 194 aaKnown RBP9.23□□□□□ -0.93
SS18-220ENST00000582092 SCTRP47872 440 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 RGS4P49798 205 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 NAGLUP54802 743 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 IL2P60568 153 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 ATP6V0D1P61421 351 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 OCRLQ01968 901 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 ACTN3Q08043 901 aaPredicted RBP9.23□□□□□ -0.93
SS18-220ENST00000582092 TCF15Q12870 199 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 PRKAA1Q13131 559 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 RCN2Q14257 317 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 ANGPT1Q15389 498 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 EML3Q32P44 896 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 ITPRIPL2Q3MIP1 535 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 ZNF789Q5FWF6 425 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 CGB2Q6NT52 195 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 ERAP2Q6P179 960 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 FAM151BQ6UXP7 276 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 DPY19L3Q6ZPD9 716 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 Q6ZVU0 165 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 SNX20Q7Z614 316 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 MTDHQ86UE4 582 aaKnown RBP9.23□□□□□ -0.93
SS18-220ENST00000582092 C1orf210Q8IVY1 113 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 RBFAQ8N0V3 343 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 CBARPQ8N350 705 aaPredicted RBP9.23□□□□□ -0.93
SS18-220ENST00000582092 SPATA6LQ8N4H0 392 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.23□□□□□ -0.93
SS18-220ENST00000582092 ACVR1CQ8NER5 493 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 GRIN3AQ8TCU5 1115 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 CYB5D2Q8WUJ1 264 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 ERP27Q96DN0 273 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 DCUN1D1Q96GG9 259 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 LRIG1Q96JA1 1093 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 FAR2Q96K12 515 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 CNDP1Q96KN2 507 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 KLHL32Q96NJ5 620 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 RAB3IPQ96QF0 476 aaPredicted RBP9.23□□□□□ -0.93
SS18-220ENST00000582092 OLFM1Q99784 485 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 FOXQ1Q9C009 403 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 EBF3Q9H4W6 596 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 STN1Q9H668 368 aaKnown RBP9.23□□□□□ -0.93
SS18-220ENST00000582092 DYRK4Q9NR20 520 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 ABCF3Q9NUQ8 709 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 SPATA6Q9NWH7 488 aaPredicted RBP9.23□□□□□ -0.93
SS18-220ENST00000582092 IL17CQ9P0M4 197 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 VTI1BQ9UEU0 232 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 IL36AQ9UHA7 158 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 GNPTGQ9UJJ9 305 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 RNF112Q9ULX5 631 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 TMCO1Q9UM00 188 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 NDRG2Q9UN36 371 aaKnown RBP9.23□□□□□ -0.93
SS18-220ENST00000582092 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.23□□□□□ -0.93
SS18-220ENST00000582092 CACNA1HO95180 2353 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 FANCMQ8IYD8 2048 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 ATG2BQ96BY7 2078 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 CFAP73A6NFT4 308 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 TTC34A8MYJ7 566 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.22□□□□□ -0.93
SS18-220ENST00000582092 CFAP99D6REC4 459 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 G3V2L1 256 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 TK2O00142 265 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 MYO1CO00159 1063 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 PRMT5O14744 637 aaPredicted RBP9.22□□□□□ -0.93
SS18-220ENST00000582092 GIPC1O14908 333 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 HOXC11O43248 304 aaPredicted RBP9.22□□□□□ -0.93
SS18-220ENST00000582092 ITM2AO43736 263 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 NPHS1O60500 1241 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 SNX2O60749 519 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 CRCPO75575 148 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 LYPLA1O75608 230 aaPredicted RBP9.22□□□□□ -0.93
SS18-220ENST00000582092 PRAMEF1O95521 474 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 PRNPP04156 253 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 GFAPP14136 432 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 ZNF30P17039 623 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 PSMA3P25788 255 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 RPL14P50914 215 aaKnown RBP9.22□□□□□ -0.93
SS18-220ENST00000582092 CDKN2DP55273 166 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 DNAJB13P59910 316 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 NAA20P61599 178 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 RUNX3Q13761 415 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 TBCCQ15814 346 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 ARSIQ5FYB1 569 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 TRIM68Q6AZZ1 485 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 ACAD11Q709F0 780 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 PIWIL4Q7Z3Z4 852 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms