RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 TMEM47Q9BQJ4 181 aa3.17□□□□□ -1.9
SMCHD1-206ENST00000581631 ERVMER34-1Q9H9K5 563 aa3.17□□□□□ -1.9
SMCHD1-206ENST00000581631 FKRPQ9H9S5 495 aa3.17□□□□□ -1.9
SMCHD1-206ENST00000581631 BRF2Q9HAW0 419 aa3.17□□□□□ -1.9
SMCHD1-206ENST00000581631 SEBOXQ9HB31 216 aaPredicted RBP3.17□□□□□ -1.9
SMCHD1-206ENST00000581631 PDP2Q9P2J9 529 aa3.17□□□□□ -1.9
SMCHD1-206ENST00000581631 HAO1Q9UJM8 370 aa3.17□□□□□ -1.9
SMCHD1-206ENST00000581631 OR2W1Q9Y3N9 320 aa3.17□□□□□ -1.9
SMCHD1-206ENST00000581631 CAPN7Q9Y6W3 813 aa3.17□□□□□ -1.9
SMCHD1-206ENST00000581631 CROCCQ5TZA2 2017 aa3.16□□□□□ -1.9
SMCHD1-206ENST00000581631 AGR2O95994 175 aa3.16□□□□□ -1.9
SMCHD1-206ENST00000581631 ERVK-10P10266 1014 aa3.16□□□□□ -1.9
SMCHD1-206ENST00000581631 GNB3P16520 340 aa3.16□□□□□ -1.9
SMCHD1-206ENST00000581631 SP100P23497 879 aaPredicted RBP3.16□□□□□ -1.9
SMCHD1-206ENST00000581631 PIP4K2AP48426 406 aaPredicted RBP3.16□□□□□ -1.9
SMCHD1-206ENST00000581631 CLK1P49759 484 aaKnown RBP3.16□□□□□ -1.9
SMCHD1-206ENST00000581631 EIF3BP55884 814 aaKnown RBP3.16□□□□□ -1.9
SMCHD1-206ENST00000581631 CSNK2A1P68400 391 aaPredicted RBP3.16□□□□□ -1.9
SMCHD1-206ENST00000581631 FOXM1Q08050 763 aa3.16□□□□□ -1.9
SMCHD1-206ENST00000581631 SIGIRRQ6IA17 410 aa3.16□□□□□ -1.9
SMCHD1-206ENST00000581631 ACAD10Q6JQN1 1059 aa3.16□□□□□ -1.9
SMCHD1-206ENST00000581631 TSSK4Q6SA08 328 aa3.16□□□□□ -1.9
SMCHD1-206ENST00000581631 ASB18Q6ZVZ8 466 aa3.16□□□□□ -1.9
SMCHD1-206ENST00000581631 ARMC8Q8IUR7 673 aa3.16□□□□□ -1.9
SMCHD1-206ENST00000581631 SMC5Q8IY18 1101 aa3.16□□□□□ -1.9
SMCHD1-206ENST00000581631 CSNK2A3Q8NEV1 391 aa3.16□□□□□ -1.9
SMCHD1-206ENST00000581631 PSPC1Q8WXF1 523 aaKnown RBP3.16□□□□□ -1.9
SMCHD1-206ENST00000581631 RHBDF1Q96CC6 855 aa3.16□□□□□ -1.9
SMCHD1-206ENST00000581631 PPP1R13BQ96KQ4 1090 aa3.16□□□□□ -1.9
SMCHD1-206ENST00000581631 PIP5K1AQ99755 562 aa3.16□□□□□ -1.9
SMCHD1-206ENST00000581631 PCGF1Q9BSM1 259 aa3.16□□□□□ -1.9
SMCHD1-206ENST00000581631 PRKRIP1Q9H875 184 aaPredicted RBP3.16□□□□□ -1.9
SMCHD1-206ENST00000581631 SLC28A3Q9HAS3 691 aa3.16□□□□□ -1.9
SMCHD1-206ENST00000581631 ASAH2Q9NR71 780 aa3.16□□□□□ -1.9
SMCHD1-206ENST00000581631 ACSS1Q9NUB1 689 aaPredicted RBP3.16□□□□□ -1.9
SMCHD1-206ENST00000581631 PADI3Q9ULW8 664 aa3.16□□□□□ -1.9
SMCHD1-206ENST00000581631 KDM3AQ9Y4C1 1321 aa3.16□□□□□ -1.9
SMCHD1-206ENST00000581631 COL5A2P05997 1499 aaPredicted RBP3.16□□□□□ -1.9
SMCHD1-206ENST00000581631 SMIM1B2RUZ4 78 aa3.15□□□□□ -1.91
SMCHD1-206ENST00000581631 EIF3CLB5ME19 914 aaKnown RBP3.15□□□□□ -1.91
SMCHD1-206ENST00000581631 DVL1O14640 695 aa3.15□□□□□ -1.91
SMCHD1-206ENST00000581631 NKX2-2O95096 273 aa3.15□□□□□ -1.91
SMCHD1-206ENST00000581631 IGLV1-44P01699 117 aa3.15□□□□□ -1.91
SMCHD1-206ENST00000581631 ATP1A3P13637 1013 aa3.15□□□□□ -1.91
SMCHD1-206ENST00000581631 ICAM3P32942 547 aa3.15□□□□□ -1.91
SMCHD1-206ENST00000581631 MMP14P50281 582 aa3.15□□□□□ -1.91
SMCHD1-206ENST00000581631 RARSP54136 660 aaKnown RBP3.15□□□□□ -1.91
SMCHD1-206ENST00000581631 DVL1P1P54792 670 aaPredicted RBP3.15□□□□□ -1.91
SMCHD1-206ENST00000581631 TAS2R38P59533 333 aa3.15□□□□□ -1.91
SMCHD1-206ENST00000581631 IRX6P78412 446 aaPredicted RBP3.15□□□□□ -1.91
SMCHD1-206ENST00000581631 CXorf66Q5JRM2 361 aaPredicted RBP3.15□□□□□ -1.91
SMCHD1-206ENST00000581631 SIRPB2Q5JXA9 342 aa3.15□□□□□ -1.91
SMCHD1-206ENST00000581631 PDSS1Q5T2R2 415 aa3.15□□□□□ -1.91
SMCHD1-206ENST00000581631 CDC73Q6P1J9 531 aa3.15□□□□□ -1.91
SMCHD1-206ENST00000581631 SLC27A1Q6PCB7 646 aa3.15□□□□□ -1.91
SMCHD1-206ENST00000581631 INO80CQ6PI98 192 aaPredicted RBP3.15□□□□□ -1.91
SMCHD1-206ENST00000581631 C15orf39Q6ZRI6 1047 aa3.15□□□□□ -1.91
SMCHD1-206ENST00000581631 STXBP4Q6ZWJ1 553 aa3.15□□□□□ -1.91
SMCHD1-206ENST00000581631 DPPA4Q7L190 304 aa3.15□□□□□ -1.91
SMCHD1-206ENST00000581631 BEST3Q8N1M1 668 aa3.15□□□□□ -1.91
SMCHD1-206ENST00000581631 ACVR1CQ8NER5 493 aa3.15□□□□□ -1.91
SMCHD1-206ENST00000581631 OR14L1PQ8NHC6 308 aa3.15□□□□□ -1.91
SMCHD1-206ENST00000581631 IGSF8Q969P0 613 aa3.15□□□□□ -1.91
SMCHD1-206ENST00000581631 SCRN2Q96FV2 425 aa3.15□□□□□ -1.91
SMCHD1-206ENST00000581631 ST6GAL2Q96JF0 529 aa3.15□□□□□ -1.91
SMCHD1-206ENST00000581631 SYT17Q9BSW7 474 aa3.15□□□□□ -1.91
SMCHD1-206ENST00000581631 UBN1Q9NPG3 1134 aa3.15□□□□□ -1.91
SMCHD1-206ENST00000581631 TAS2R10Q9NYW0 307 aa3.15□□□□□ -1.91
SMCHD1-206ENST00000581631 FAF1Q9UNN5 650 aaPredicted RBP3.15□□□□□ -1.91
SMCHD1-206ENST00000581631 FAM237AA0A1B0GTK4 181 aa3.14□□□□□ -1.91
SMCHD1-206ENST00000581631 NPHP1O15259 732 aa3.14□□□□□ -1.91
SMCHD1-206ENST00000581631 SPINT2O43291 252 aa3.14□□□□□ -1.91
SMCHD1-206ENST00000581631 TGFB1I1O43294 461 aa3.14□□□□□ -1.91
SMCHD1-206ENST00000581631 PRKNO60260 465 aaPredicted RBP3.14□□□□□ -1.91
SMCHD1-206ENST00000581631 WDR1O75083 606 aa3.14□□□□□ -1.91
SMCHD1-206ENST00000581631 IGHV4-39P01824 125 aa3.14□□□□□ -1.91
SMCHD1-206ENST00000581631 PRSS56P0CW18 603 aa3.14□□□□□ -1.91
SMCHD1-206ENST00000581631 UBL4AP11441 157 aa3.14□□□□□ -1.91
SMCHD1-206ENST00000581631 ZNF182P17025 639 aaPredicted RBP3.14□□□□□ -1.91
SMCHD1-206ENST00000581631 ZNF26P17031 533 aaPredicted RBP3.14□□□□□ -1.91
SMCHD1-206ENST00000581631 CHRNB4P30926 498 aa3.14□□□□□ -1.91
SMCHD1-206ENST00000581631 GAGE5Q13069 117 aa3.14□□□□□ -1.91
SMCHD1-206ENST00000581631 GAGE6Q13070 117 aa3.14□□□□□ -1.91
SMCHD1-206ENST00000581631 TBX2Q13207 712 aaPredicted RBP3.14□□□□□ -1.91
SMCHD1-206ENST00000581631 GTF2H2Q13888 395 aa3.14□□□□□ -1.91
SMCHD1-206ENST00000581631 WDR38Q5JTN6 314 aa3.14□□□□□ -1.91
SMCHD1-206ENST00000581631 SFMBT2Q5VUG0 894 aa3.14□□□□□ -1.91
SMCHD1-206ENST00000581631 FRG2Q64ET8 278 aa3.14□□□□□ -1.91
SMCHD1-206ENST00000581631 GTF2H2CQ6P1K8 395 aa3.14□□□□□ -1.91
SMCHD1-206ENST00000581631 BRAT1Q6PJG6 821 aa3.14□□□□□ -1.91
SMCHD1-206ENST00000581631 RAD9BQ6WBX8 426 aa3.14□□□□□ -1.91
SMCHD1-206ENST00000581631 GSTA5Q7RTV2 222 aa3.14□□□□□ -1.91
SMCHD1-206ENST00000581631 EXOC8Q8IYI6 725 aa3.14□□□□□ -1.91
SMCHD1-206ENST00000581631 OR5R1Q8NH85 324 aa3.14□□□□□ -1.91
SMCHD1-206ENST00000581631 WDR20Q8TBZ3 569 aa3.14□□□□□ -1.91
SMCHD1-206ENST00000581631 METTL6Q8TCB7 284 aa3.14□□□□□ -1.91
SMCHD1-206ENST00000581631 SLC38A5Q8WUX1 472 aa3.14□□□□□ -1.91
SMCHD1-206ENST00000581631 APBB2Q92870 758 aa3.14□□□□□ -1.91
SMCHD1-206ENST00000581631 PIGTQ969N2 578 aa3.14□□□□□ -1.91
SMCHD1-206ENST00000581631 QRFPRQ96P65 431 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms