RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 LILRA5A6NI73 299 aa14.35□□□□□ -0.11
SMARCE1-216ENST00000580419 PRR19A6NJB7 356 aa14.35□□□□□ -0.11
SMARCE1-216ENST00000580419 FADS2P1A8MWK0 482 aa14.35□□□□□ -0.11
SMARCE1-216ENST00000580419 STMND1H3BQB6 276 aa14.35□□□□□ -0.11
SMARCE1-216ENST00000580419 TOX3O15405 576 aaPredicted RBP14.35□□□□□ -0.11
SMARCE1-216ENST00000580419 DUX1O43812 170 aa14.35□□□□□ -0.11
SMARCE1-216ENST00000580419 PPFIA2O75334 1257 aa14.35□□□□□ -0.11
SMARCE1-216ENST00000580419 ZNF189O75820 626 aaPredicted RBP14.35□□□□□ -0.11
SMARCE1-216ENST00000580419 NDST3O95803 873 aa14.35□□□□□ -0.11
SMARCE1-216ENST00000580419 HMGCLP35914 325 aa14.35□□□□□ -0.11
SMARCE1-216ENST00000580419 GJC1P36383 396 aa14.35□□□□□ -0.11
SMARCE1-216ENST00000580419 CDKN2BP42772 138 aa14.35□□□□□ -0.11
SMARCE1-216ENST00000580419 AP1B1Q10567 949 aa14.35□□□□□ -0.11
SMARCE1-216ENST00000580419 TCEA2Q15560 299 aa14.35□□□□□ -0.11
SMARCE1-216ENST00000580419 ODF2Q5BJF6 829 aa14.35□□□□□ -0.11
SMARCE1-216ENST00000580419 ZFYVE27Q5T4F4 411 aa14.35□□□□□ -0.11
SMARCE1-216ENST00000580419 PHF19Q5T6S3 580 aa14.35□□□□□ -0.11
SMARCE1-216ENST00000580419 CCDC70Q6NSX1 233 aa14.35□□□□□ -0.11
SMARCE1-216ENST00000580419 FOXR1Q6PIV2 292 aa14.35□□□□□ -0.11
SMARCE1-216ENST00000580419 ARHGAP22Q7Z5H3 698 aa14.35□□□□□ -0.11
SMARCE1-216ENST00000580419 SLC9B2Q86UD5 537 aa14.35□□□□□ -0.11
SMARCE1-216ENST00000580419 JAMLQ86YT9 394 aa14.35□□□□□ -0.11
SMARCE1-216ENST00000580419 RBM12BQ8IXT5 1001 aaKnown RBP14.35□□□□□ -0.11
SMARCE1-216ENST00000580419 CCDC170Q8IYT3 715 aa14.35□□□□□ -0.11
SMARCE1-216ENST00000580419 SLC37A2Q8TED4 501 aa14.35□□□□□ -0.11
SMARCE1-216ENST00000580419 EID2BQ96D98 161 aa14.35□□□□□ -0.11
SMARCE1-216ENST00000580419 SGF29Q96ES7 293 aa14.35□□□□□ -0.11
SMARCE1-216ENST00000580419 NUDT22Q9BRQ3 303 aa14.35□□□□□ -0.11
SMARCE1-216ENST00000580419 TSPY26PQ9H489 355 aa14.35□□□□□ -0.11
SMARCE1-216ENST00000580419 RDH14Q9HBH5 336 aa14.35□□□□□ -0.11
SMARCE1-216ENST00000580419 GLOD4Q9HC38 313 aa14.35□□□□□ -0.11
SMARCE1-216ENST00000580419 KCNK4Q9NYG8 393 aa14.35□□□□□ -0.11
SMARCE1-216ENST00000580419 HACD3Q9P035 362 aa14.35□□□□□ -0.11
SMARCE1-216ENST00000580419 EFR3BQ9Y2G0 817 aa14.35□□□□□ -0.11
SMARCE1-216ENST00000580419 TMEM98Q9Y2Y6 226 aa14.35□□□□□ -0.11
SMARCE1-216ENST00000580419 BSNQ9UPA5 3926 aa14.35□□□□□ -0.11
SMARCE1-216ENST00000580419 PRAMEF33A0A0G2JMD5 474 aa14.34□□□□□ -0.11
SMARCE1-216ENST00000580419 LOC285095A0A1B0GVY8 99 aa14.34□□□□□ -0.11
SMARCE1-216ENST00000580419 HACD1B0YJ81 288 aa14.34□□□□□ -0.11
SMARCE1-216ENST00000580419 AKR1B15C9JRZ8 316 aaPredicted RBP14.34□□□□□ -0.11
SMARCE1-216ENST00000580419 CAPN5O15484 640 aaPredicted RBP14.34□□□□□ -0.11
SMARCE1-216ENST00000580419 GRID2O43424 1007 aa14.34□□□□□ -0.11
SMARCE1-216ENST00000580419 PRAMEF10O60809 474 aa14.34□□□□□ -0.11
SMARCE1-216ENST00000580419 MAP3K6O95382 1288 aa14.34□□□□□ -0.11
SMARCE1-216ENST00000580419 ANKRD34CP0C6C1 535 aa14.34□□□□□ -0.11
SMARCE1-216ENST00000580419 HGFP14210 728 aa14.34□□□□□ -0.11
SMARCE1-216ENST00000580419 XRCC1P18887 633 aaPredicted RBP14.34□□□□□ -0.11
SMARCE1-216ENST00000580419 ITIH1P19827 911 aa14.34□□□□□ -0.11
SMARCE1-216ENST00000580419 CSTF2P33240 577 aaKnown RBP eCLIP14.34□□□□□ -0.11
SMARCE1-216ENST00000580419 HHEXQ03014 270 aa14.34□□□□□ -0.11
SMARCE1-216ENST00000580419 ZNF569Q5MCW4 686 aa14.34□□□□□ -0.11
SMARCE1-216ENST00000580419 DOK6Q6PKX4 331 aa14.34□□□□□ -0.11
SMARCE1-216ENST00000580419 PHYKPLQ8IUZ5 450 aa14.34□□□□□ -0.11
SMARCE1-216ENST00000580419 KATNAL2Q8IYT4 538 aa14.34□□□□□ -0.11
SMARCE1-216ENST00000580419 ZSCAN1Q8NBB4 408 aa14.34□□□□□ -0.11
SMARCE1-216ENST00000580419 PATE1Q8WXA2 126 aa14.34□□□□□ -0.11
SMARCE1-216ENST00000580419 USP7Q93009 1102 aa14.34□□□□□ -0.11
SMARCE1-216ENST00000580419 GLYATL1Q969I3 302 aa14.34□□□□□ -0.11
SMARCE1-216ENST00000580419 CCDC74BQ96LY2 380 aa14.34□□□□□ -0.11
SMARCE1-216ENST00000580419 SMIM14Q96QK8 99 aa14.34□□□□□ -0.11
SMARCE1-216ENST00000580419 TIMM29Q9BSF4 260 aa14.34□□□□□ -0.11
SMARCE1-216ENST00000580419 LUC7LQ9NQ29 371 aaKnown RBP14.34□□□□□ -0.11
SMARCE1-216ENST00000580419 FBXO8Q9NRD0 319 aa14.34□□□□□ -0.11
SMARCE1-216ENST00000580419 TBC1D29Q9UFV1 150 aa14.34□□□□□ -0.11
SMARCE1-216ENST00000580419 ZNHIT2Q9UHR6 403 aa14.34□□□□□ -0.11
SMARCE1-216ENST00000580419 OAS3Q9Y6K5 1087 aaKnown RBP14.34□□□□□ -0.11
SMARCE1-216ENST00000580419 MYO18BQ8IUG5 2567 aa14.34□□□□□ -0.11
SMARCE1-216ENST00000580419 KLHL33A6NCF5 533 aa14.33□□□□□ -0.12
SMARCE1-216ENST00000580419 SLC25A14O95258 325 aaPredicted RBP14.33□□□□□ -0.12
SMARCE1-216ENST00000580419 ASMTLO95671 621 aa14.33□□□□□ -0.12
SMARCE1-216ENST00000580419 FGF3P11487 239 aaPredicted RBP14.33□□□□□ -0.12
SMARCE1-216ENST00000580419 CSF2RBP32927 897 aa14.33□□□□□ -0.12
SMARCE1-216ENST00000580419 ETV5P41161 510 aa14.33□□□□□ -0.12
SMARCE1-216ENST00000580419 COPS2P61201 443 aa14.33□□□□□ -0.12
SMARCE1-216ENST00000580419 XRCC4Q13426 336 aa14.33□□□□□ -0.12
SMARCE1-216ENST00000580419 PPP2R5EQ16537 467 aa14.33□□□□□ -0.12
SMARCE1-216ENST00000580419 AMZ1Q400G9 498 aa14.33□□□□□ -0.12
SMARCE1-216ENST00000580419 TFDP3Q5H9I0 405 aa14.33□□□□□ -0.12
SMARCE1-216ENST00000580419 MANEAQ5SRI9 462 aa14.33□□□□□ -0.12
SMARCE1-216ENST00000580419 AGAP9Q5VTM2 703 aa14.33□□□□□ -0.12
SMARCE1-216ENST00000580419 USP53Q70EK8 1073 aa14.33□□□□□ -0.12
SMARCE1-216ENST00000580419 ZNF605Q86T29 641 aa14.33□□□□□ -0.12
SMARCE1-216ENST00000580419 RCOR2Q8IZ40 523 aa14.33□□□□□ -0.12
SMARCE1-216ENST00000580419 BMPERQ8N8U9 685 aa14.33□□□□□ -0.12
SMARCE1-216ENST00000580419 BRSK1Q8TDC3 778 aa14.33□□□□□ -0.12
SMARCE1-216ENST00000580419 TFB1MQ8WVM0 346 aaKnown RBP14.33□□□□□ -0.12
SMARCE1-216ENST00000580419 SLC38A3Q99624 504 aa14.33□□□□□ -0.12
SMARCE1-216ENST00000580419 SPRY4Q9C004 299 aa14.33□□□□□ -0.12
SMARCE1-216ENST00000580419 SPTLC3Q9NUV7 552 aa14.33□□□□□ -0.12
SMARCE1-216ENST00000580419 ATXN10Q9UBB4 475 aa14.33□□□□□ -0.12
SMARCE1-216ENST00000580419 FAM153AQ9UHL3 310 aa14.33□□□□□ -0.12
SMARCE1-216ENST00000580419 TRHDEQ9UKU6 1024 aa14.33□□□□□ -0.12
SMARCE1-216ENST00000580419 ZNF711Q9Y462 761 aa14.33□□□□□ -0.12
SMARCE1-216ENST00000580419 MN1Q10571 1320 aaPredicted RBP14.33□□□□□ -0.12
SMARCE1-216ENST00000580419 A0A0U1RQS6 177 aa14.32□□□□□ -0.12
SMARCE1-216ENST00000580419 B8ZZF3 427 aa14.32□□□□□ -0.12
SMARCE1-216ENST00000580419 KMOO15229 486 aa14.32□□□□□ -0.12
SMARCE1-216ENST00000580419 INPP4BO15327 924 aa14.32□□□□□ -0.12
SMARCE1-216ENST00000580419 SPOPO43791 374 aa14.32□□□□□ -0.12
SMARCE1-216ENST00000580419 ZRANB2O95218 330 aaKnown RBP eCLIP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms