RNA–Protein interactions for RNA: ENST00000578122.5

IFT20-206, Transcript of intraflagellar transport 20, humanhuman

TSL 2 BASIC

Gene IFT20, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-206ENST00000578122 VPS35Q96QK1 796 aa15.26■□□□□ 0.03
IFT20-206ENST00000578122 TRIM51Q9BSJ1 452 aa15.26■□□□□ 0.03
IFT20-206ENST00000578122 LRRC61Q9BV99 259 aa15.26■□□□□ 0.03
IFT20-206ENST00000578122 SLC32A1Q9H598 525 aa15.26■□□□□ 0.03
IFT20-206ENST00000578122 SUDS3Q9H7L9 328 aaPredicted RBP15.26■□□□□ 0.03
IFT20-206ENST00000578122 UGT1A7Q9HAW7 530 aa15.26■□□□□ 0.03
IFT20-206ENST00000578122 UGT1A10Q9HAW8 530 aa15.26■□□□□ 0.03
IFT20-206ENST00000578122 UGT1A8Q9HAW9 530 aa15.26■□□□□ 0.03
IFT20-206ENST00000578122 TRIM39Q9HCM9 518 aa15.26■□□□□ 0.03
IFT20-206ENST00000578122 APPL1Q9UKG1 709 aa15.26■□□□□ 0.03
IFT20-206ENST00000578122 TMPRSS11EQ9UL52 423 aa15.26■□□□□ 0.03
IFT20-206ENST00000578122 TCAF1Q9Y4C2 921 aa15.26■□□□□ 0.03
IFT20-206ENST00000578122 CSNK1G3Q9Y6M4 447 aa15.26■□□□□ 0.03
IFT20-206ENST00000578122 ZFC3H1O60293 1989 aaKnown RBP15.25■□□□□ 0.03
IFT20-206ENST00000578122 CCDC78A2IDD5 438 aa15.25■□□□□ 0.03
IFT20-206ENST00000578122 DCDC2BA2VCK2 349 aa15.25■□□□□ 0.03
IFT20-206ENST00000578122 NEMP2A6NFY4 417 aa15.25■□□□□ 0.03
IFT20-206ENST00000578122 CCL22O00626 93 aa15.25■□□□□ 0.03
IFT20-206ENST00000578122 DNALI1O14645 258 aaPredicted RBP15.25■□□□□ 0.03
IFT20-206ENST00000578122 SRP72O76094 671 aaKnown RBP15.25■□□□□ 0.03
IFT20-206ENST00000578122 TMEM63AO94886 807 aa15.25■□□□□ 0.03
IFT20-206ENST00000578122 PRAMEF1O95521 474 aa15.25■□□□□ 0.03
IFT20-206ENST00000578122 FUCA1P04066 466 aa15.25■□□□□ 0.03
IFT20-206ENST00000578122 PSMA3P25788 255 aa15.25■□□□□ 0.03
IFT20-206ENST00000578122 MGAT1P26572 445 aa15.25■□□□□ 0.03
IFT20-206ENST00000578122 GNPDA1P46926 289 aa15.25■□□□□ 0.03
IFT20-206ENST00000578122 ID4P47928 161 aa15.25■□□□□ 0.03
IFT20-206ENST00000578122 ITGA9Q13797 1035 aa15.25■□□□□ 0.03
IFT20-206ENST00000578122 TUBB2AQ13885 445 aa15.25■□□□□ 0.03
IFT20-206ENST00000578122 PCID2Q5JVF3 399 aa15.25■□□□□ 0.03
IFT20-206ENST00000578122 ZNF648Q5T619 568 aaPredicted RBP15.25■□□□□ 0.03
IFT20-206ENST00000578122 TSTD2Q5T7W7 516 aa15.25■□□□□ 0.03
IFT20-206ENST00000578122 RNASEH2BQ5TBB1 312 aaKnown RBP15.25■□□□□ 0.03
IFT20-206ENST00000578122 MARK2Q7KZI7 788 aaKnown RBP15.25■□□□□ 0.03
IFT20-206ENST00000578122 NLRP9Q7RTR0 991 aa15.25■□□□□ 0.03
IFT20-206ENST00000578122 PCGF5Q86SE9 256 aa15.25■□□□□ 0.03
IFT20-206ENST00000578122 PHYKPLQ8IUZ5 450 aa15.25■□□□□ 0.03
IFT20-206ENST00000578122 FSTL5Q8N475 847 aaPredicted RBP15.25■□□□□ 0.03
IFT20-206ENST00000578122 NAT8LQ8N9F0 302 aa15.25■□□□□ 0.03
IFT20-206ENST00000578122 SCARF2Q96GP6 870 aaPredicted RBP15.25■□□□□ 0.03
IFT20-206ENST00000578122 CDKN2AIPNLQ96HQ2 116 aa15.25■□□□□ 0.03
IFT20-206ENST00000578122 TUBB2BQ9BVA1 445 aa15.25■□□□□ 0.03
IFT20-206ENST00000578122 IL22Q9GZX6 179 aa15.25■□□□□ 0.03
IFT20-206ENST00000578122 CARS2Q9HA77 564 aaKnown RBP15.25■□□□□ 0.03
IFT20-206ENST00000578122 XAB2Q9HCS7 855 aaKnown RBP15.25■□□□□ 0.03
IFT20-206ENST00000578122 ARFGAP3Q9NP61 516 aa15.25■□□□□ 0.03
IFT20-206ENST00000578122 VPS18Q9P253 973 aa15.25■□□□□ 0.03
IFT20-206ENST00000578122 PCOLCE2Q9UKZ9 415 aa15.25■□□□□ 0.03
IFT20-206ENST00000578122 RIMKLBQ9ULI2 386 aa15.25■□□□□ 0.03
IFT20-206ENST00000578122 SUFUQ9UMX1 484 aa15.25■□□□□ 0.03
IFT20-206ENST00000578122 GOLGA4Q13439 2230 aaKnown RBP15.25■□□□□ 0.03
IFT20-206ENST00000578122 CNOT1A5YKK6 2376 aaKnown RBP15.25■□□□□ 0.03
IFT20-206ENST00000578122 ARHGEF17Q96PE2 2063 aaPredicted RBP15.24■□□□□ 0.03
IFT20-206ENST00000578122 FAM187AA6NFU0 413 aa15.24■□□□□ 0.03
IFT20-206ENST00000578122 GOLGA8MH3BSY2 632 aa15.24■□□□□ 0.03
IFT20-206ENST00000578122 H7C0S8 307 aa15.24■□□□□ 0.03
IFT20-206ENST00000578122 FFAR2O15552 330 aa15.24■□□□□ 0.03
IFT20-206ENST00000578122 MLNP12872 115 aa15.24■□□□□ 0.03
IFT20-206ENST00000578122 IVDP26440 423 aa15.24■□□□□ 0.03
IFT20-206ENST00000578122 CRADDP78560 199 aa15.24■□□□□ 0.03
IFT20-206ENST00000578122 PEX6Q13608 980 aa15.24■□□□□ 0.03
IFT20-206ENST00000578122 ELOCQ15369 112 aa15.24■□□□□ 0.03
IFT20-206ENST00000578122 TCEA2Q15560 299 aa15.24■□□□□ 0.03
IFT20-206ENST00000578122 IZUMO3Q5VZ72 239 aa15.24■□□□□ 0.03
IFT20-206ENST00000578122 MAATS1Q7Z4T9 603 aa15.24■□□□□ 0.03
IFT20-206ENST00000578122 ADGRG6Q86SQ4 1221 aa15.24■□□□□ 0.03
IFT20-206ENST00000578122 CAND1Q86VP6 1230 aaKnown RBP15.24■□□□□ 0.03
IFT20-206ENST00000578122 GDAP1Q8TB36 358 aa15.24■□□□□ 0.03
IFT20-206ENST00000578122 CDC6Q99741 560 aa15.24■□□□□ 0.03
IFT20-206ENST00000578122 CLPBQ9H078 707 aa15.24■□□□□ 0.03
IFT20-206ENST00000578122 TMEM168Q9H0V1 697 aa15.24■□□□□ 0.03
IFT20-206ENST00000578122 OR2AG1Q9H205 316 aa15.24■□□□□ 0.03
IFT20-206ENST00000578122 ASB8Q9H765 288 aa15.24■□□□□ 0.03
IFT20-206ENST00000578122 RMI1Q9H9A7 625 aa15.24■□□□□ 0.03
IFT20-206ENST00000578122 ATXN10Q9UBB4 475 aa15.24■□□□□ 0.03
IFT20-206ENST00000578122 SLC30A1Q9Y6M5 507 aa15.24■□□□□ 0.03
IFT20-206ENST00000578122 COL5A1P20908 1838 aaPredicted RBP15.24■□□□□ 0.03
IFT20-206ENST00000578122 LMO7DNF2Z398 122 aa15.23■□□□□ 0.03
IFT20-206ENST00000578122 TRIM38O00635 465 aa15.23■□□□□ 0.03
IFT20-206ENST00000578122 GPR39O43194 453 aa15.23■□□□□ 0.03
IFT20-206ENST00000578122 VEGFDO43915 354 aa15.23■□□□□ 0.03
IFT20-206ENST00000578122 DNAJC6O75061 913 aa15.23■□□□□ 0.03
IFT20-206ENST00000578122 CBFA2T3O75081 653 aa15.23■□□□□ 0.03
IFT20-206ENST00000578122 AVILO75366 819 aa15.23■□□□□ 0.03
IFT20-206ENST00000578122 MTX2O75431 263 aa15.23■□□□□ 0.03
IFT20-206ENST00000578122 ANXA6P08133 673 aa15.23■□□□□ 0.03
IFT20-206ENST00000578122 CELA2BP08218 269 aaPredicted RBP15.23■□□□□ 0.03
IFT20-206ENST00000578122 GIMD1P0DJR0 217 aa15.23■□□□□ 0.03
IFT20-206ENST00000578122 ALPPL2P10696 532 aa15.23■□□□□ 0.03
IFT20-206ENST00000578122 ZNF8P17098 575 aaPredicted RBP15.23■□□□□ 0.03
IFT20-206ENST00000578122 ITGALP20701 1170 aa15.23■□□□□ 0.03
IFT20-206ENST00000578122 MC4RP32245 332 aa15.23■□□□□ 0.03
IFT20-206ENST00000578122 CA5AP35218 305 aa15.23■□□□□ 0.03
IFT20-206ENST00000578122 ARSDP51689 593 aa15.23■□□□□ 0.03
IFT20-206ENST00000578122 MRPS25P82663 173 aaKnown RBP15.23■□□□□ 0.03
IFT20-206ENST00000578122 NFATC2Q13469 925 aa15.23■□□□□ 0.03
IFT20-206ENST00000578122 DEFB133Q30KQ1 61 aa15.23■□□□□ 0.03
IFT20-206ENST00000578122 KHDC1Q4VXA5 237 aaKnown RBP15.23■□□□□ 0.03
IFT20-206ENST00000578122 PYCR3Q53H96 274 aa15.23■□□□□ 0.03
IFT20-206ENST00000578122 ZRANB3Q5FWF4 1079 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms