RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 CCNJLQ8IV13 435 aa13.86□□□□□ -0.19
RPAIN-217ENST00000575711 AGGF1Q8N302 714 aaeCLIP13.86□□□□□ -0.19
RPAIN-217ENST00000575711 MINDY1Q8N5J2 469 aa13.86□□□□□ -0.19
RPAIN-217ENST00000575711 FBXO25Q8TCJ0 367 aa13.86□□□□□ -0.19
RPAIN-217ENST00000575711 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.86□□□□□ -0.19
RPAIN-217ENST00000575711 ZNF669Q96BR6 464 aaPredicted RBP13.86□□□□□ -0.19
RPAIN-217ENST00000575711 EBNA1BP2Q99848 306 aaKnown RBP13.86□□□□□ -0.19
RPAIN-217ENST00000575711 RHOXF2Q9BQY4 288 aa13.86□□□□□ -0.19
RPAIN-217ENST00000575711 FAM129AQ9BZQ8 928 aa13.86□□□□□ -0.19
RPAIN-217ENST00000575711 ZCCHC2Q9C0B9 1178 aaKnown RBP13.86□□□□□ -0.19
RPAIN-217ENST00000575711 FAM96AQ9H5X1 160 aa13.86□□□□□ -0.19
RPAIN-217ENST00000575711 TRIM39Q9HCM9 518 aa13.86□□□□□ -0.19
RPAIN-217ENST00000575711 FGF22Q9HCT0 170 aa13.86□□□□□ -0.19
RPAIN-217ENST00000575711 VPS18Q9P253 973 aa13.86□□□□□ -0.19
RPAIN-217ENST00000575711 SLC17A4Q9Y2C5 497 aa13.86□□□□□ -0.19
RPAIN-217ENST00000575711 TMEM98Q9Y2Y6 226 aa13.86□□□□□ -0.19
RPAIN-217ENST00000575711 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.86□□□□□ -0.19
RPAIN-217ENST00000575711 RPS6KL1Q9Y6S9 549 aa13.86□□□□□ -0.19
RPAIN-217ENST00000575711 SCN8AQ9UQD0 1980 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 A0A1B0GTQ1 180 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 PRSS38A1L453 326 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 OR51F1A6NGY5 319 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 AGAP14A8MT82 685 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 BHMG1C9JSJ3 638 aaPredicted RBP13.85□□□□□ -0.19
RPAIN-217ENST00000575711 EIF3HO15372 352 aaKnown RBP eCLIP13.85□□□□□ -0.19
RPAIN-217ENST00000575711 YKT6O15498 198 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 SLU7O95391 586 aaKnown RBP13.85□□□□□ -0.19
RPAIN-217ENST00000575711 TTC4O95801 387 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 TNFP01375 233 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 CSF2P04141 144 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 CEACAM5P06731 702 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 NME1P15531 152 aaKnown RBP13.85□□□□□ -0.19
RPAIN-217ENST00000575711 JUNDP17535 347 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 ELK3P41970 407 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 RXRGP48443 463 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 CCT8P50990 548 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 HNRNPKP61978 463 aaKnown RBP eCLIP13.85□□□□□ -0.19
RPAIN-217ENST00000575711 HLTFQ14527 1009 aaKnown RBP eCLIP13.85□□□□□ -0.19
RPAIN-217ENST00000575711 FASTKD1Q53R41 847 aaKnown RBP13.85□□□□□ -0.19
RPAIN-217ENST00000575711 GPRC6AQ5T6X5 926 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 KIAA0930Q6ICG6 404 aaPredicted RBP13.85□□□□□ -0.19
RPAIN-217ENST00000575711 ZDHHC24Q6UX98 284 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 TAS2R42Q7RTR8 314 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 RD3Q7Z3Z2 195 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 TMEM135Q86UB9 458 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 HID1Q8IV36 788 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 IFT20Q8IY31 132 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 PHACTR4Q8IZ21 702 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 DDHD1Q8NEL9 900 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 OR2I1PQ8NGU4 316 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 OR4L1Q8NH43 312 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 IFT81Q8WYA0 676 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 OR1E3Q8WZA6 343 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 TSACCQ96A04 125 aaPredicted RBP13.85□□□□□ -0.19
RPAIN-217ENST00000575711 PDXPQ96GD0 296 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 SGSM3Q96HU1 749 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 TTC25Q96NG3 672 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 TRIM56Q9BRZ2 755 aaKnown RBP13.85□□□□□ -0.19
RPAIN-217ENST00000575711 FOXP3Q9BZS1 431 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 SLC13A1Q9BZW2 595 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 PHACTR1Q9C0D0 580 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 IL21RQ9HBE5 538 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 CYP4F12Q9HCS2 524 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 ARFGAP3Q9NP61 516 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 TMEM9BQ9NQ34 198 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 MTRF1LQ9UGC7 380 aaKnown RBP13.85□□□□□ -0.19
RPAIN-217ENST00000575711 TMPRSS11EQ9UL52 423 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 CHMP2BQ9UQN3 213 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 OAS3Q9Y6K5 1087 aaKnown RBP13.85□□□□□ -0.19
RPAIN-217ENST00000575711 DGKBQ9Y6T7 804 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 MYLKQ15746 1914 aa13.85□□□□□ -0.19
RPAIN-217ENST00000575711 PCDH15Q96QU1 1955 aa13.84□□□□□ -0.19
RPAIN-217ENST00000575711 TRBV5-4A0A0C4DH59 114 aa13.84□□□□□ -0.19
RPAIN-217ENST00000575711 GPR89AB7ZAQ6 455 aa13.84□□□□□ -0.19
RPAIN-217ENST00000575711 E7ESA3 106 aa13.84□□□□□ -0.19
RPAIN-217ENST00000575711 VEGFDO43915 354 aa13.84□□□□□ -0.19
RPAIN-217ENST00000575711 MTX2O75431 263 aa13.84□□□□□ -0.19
RPAIN-217ENST00000575711 VAPBO95292 243 aa13.84□□□□□ -0.19
RPAIN-217ENST00000575711 IVLP07476 585 aa13.84□□□□□ -0.19
RPAIN-217ENST00000575711 GPR89BP0CG08 455 aa13.84□□□□□ -0.19
RPAIN-217ENST00000575711 RALBP11234 206 aa13.84□□□□□ -0.19
RPAIN-217ENST00000575711 MSH3P20585 1137 aa13.84□□□□□ -0.19
RPAIN-217ENST00000575711 AKT1P31749 480 aa13.84□□□□□ -0.19
RPAIN-217ENST00000575711 FOXN2P32314 431 aa13.84□□□□□ -0.19
RPAIN-217ENST00000575711 PLA2G5P39877 138 aa13.84□□□□□ -0.19
RPAIN-217ENST00000575711 POLD2P49005 469 aa13.84□□□□□ -0.19
RPAIN-217ENST00000575711 HK3P52790 923 aa13.84□□□□□ -0.19
RPAIN-217ENST00000575711 TUBB4BP68371 445 aa13.84□□□□□ -0.19
RPAIN-217ENST00000575711 CBLBQ13191 982 aa13.84□□□□□ -0.19
RPAIN-217ENST00000575711 CUL1Q13616 776 aa13.84□□□□□ -0.19
RPAIN-217ENST00000575711 GTF2H3Q13889 308 aa13.84□□□□□ -0.19
RPAIN-217ENST00000575711 AARS2Q5JTZ9 985 aaKnown RBP13.84□□□□□ -0.19
RPAIN-217ENST00000575711 HP1BP3Q5SSJ5 553 aaPredicted RBP13.84□□□□□ -0.19
RPAIN-217ENST00000575711 ZNF648Q5T619 568 aaPredicted RBP13.84□□□□□ -0.19
RPAIN-217ENST00000575711 LYPLAL1Q5VWZ2 237 aa13.84□□□□□ -0.19
RPAIN-217ENST00000575711 PSAPL1Q6NUJ1 521 aa13.84□□□□□ -0.19
RPAIN-217ENST00000575711 MARK2Q7KZI7 788 aaKnown RBP13.84□□□□□ -0.19
RPAIN-217ENST00000575711 ADGRG6Q86SQ4 1221 aa13.84□□□□□ -0.19
RPAIN-217ENST00000575711 ZBED8Q8IZ13 594 aa13.84□□□□□ -0.19
RPAIN-217ENST00000575711 NXPE1Q8N323 547 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms