RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 STMN4Q9H169 189 aaPredicted RBP23.85■■□□□ 1.41
ATPAF1-213ENST00000574428 CAB39LQ9H9S4 337 aa23.85■■□□□ 1.41
ATPAF1-213ENST00000574428 TECTAO75443 2155 aa23.85■■□□□ 1.41
ATPAF1-213ENST00000574428 PLXNB3Q9ULL4 1909 aa23.85■■□□□ 1.41
ATPAF1-213ENST00000574428 FAM95CA0A1B0GW59 222 aa23.84■■□□□ 1.41
ATPAF1-213ENST00000574428 TMEM221A6NGB7 291 aa23.84■■□□□ 1.41
ATPAF1-213ENST00000574428 LRRC72A6NJI9 287 aa23.84■■□□□ 1.41
ATPAF1-213ENST00000574428 M0R296 226 aa23.84■■□□□ 1.41
ATPAF1-213ENST00000574428 SEMA4FO95754 770 aa23.84■■□□□ 1.41
ATPAF1-213ENST00000574428 PAK4O96013 591 aaPredicted RBP23.84■■□□□ 1.41
ATPAF1-213ENST00000574428 AOC1P19801 751 aa23.84■■□□□ 1.41
ATPAF1-213ENST00000574428 SAT1P21673 171 aa23.84■■□□□ 1.41
ATPAF1-213ENST00000574428 MAGOHP61326 146 aaKnown RBP23.84■■□□□ 1.41
ATPAF1-213ENST00000574428 SGCGQ13326 291 aa23.84■■□□□ 1.41
ATPAF1-213ENST00000574428 WSCD2Q2TBF2 565 aa23.84■■□□□ 1.41
ATPAF1-213ENST00000574428 ZNF549Q6P9A3 640 aa23.84■■□□□ 1.41
ATPAF1-213ENST00000574428 TRABD2AQ86V40 505 aa23.84■■□□□ 1.41
ATPAF1-213ENST00000574428 FAM160A2Q8N612 972 aaPredicted RBP23.84■■□□□ 1.41
ATPAF1-213ENST00000574428 PLA2G15Q8NCC3 412 aa23.84■■□□□ 1.41
ATPAF1-213ENST00000574428 ULK4Q96C45 1275 aa23.84■■□□□ 1.41
ATPAF1-213ENST00000574428 MTBPQ96DY7 904 aa23.84■■□□□ 1.41
ATPAF1-213ENST00000574428 TOE1Q96GM8 510 aaKnown RBP23.84■■□□□ 1.41
ATPAF1-213ENST00000574428 SERAC1Q96JX3 654 aa23.84■■□□□ 1.41
ATPAF1-213ENST00000574428 SLC17A9Q9BYT1 436 aa23.84■■□□□ 1.41
ATPAF1-213ENST00000574428 SMOXQ9NWM0 555 aa23.84■■□□□ 1.41
ATPAF1-213ENST00000574428 SLC39A10Q9ULF5 831 aa23.84■■□□□ 1.41
ATPAF1-213ENST00000574428 VPS9D1Q9Y2B5 631 aa23.84■■□□□ 1.41
ATPAF1-213ENST00000574428 TRPM6Q9BX84 2022 aa23.84■■□□□ 1.41
ATPAF1-213ENST00000574428 PFDN6O15212 129 aa23.83■■□□□ 1.41
ATPAF1-213ENST00000574428 INPP4BO15327 924 aa23.83■■□□□ 1.41
ATPAF1-213ENST00000574428 PCCBP05166 539 aa23.83■■□□□ 1.41
ATPAF1-213ENST00000574428 ATP5DP30049 168 aa23.83■■□□□ 1.41
ATPAF1-213ENST00000574428 FMO4P31512 558 aa23.83■■□□□ 1.41
ATPAF1-213ENST00000574428 MAGEA9P43362 315 aa23.83■■□□□ 1.41
ATPAF1-213ENST00000574428 GPR1P46091 355 aa23.83■■□□□ 1.41
ATPAF1-213ENST00000574428 CCR3P51677 355 aa23.83■■□□□ 1.41
ATPAF1-213ENST00000574428 CLCN5P51795 746 aa23.83■■□□□ 1.41
ATPAF1-213ENST00000574428 AGERQ15109 404 aa23.83■■□□□ 1.41
ATPAF1-213ENST00000574428 GPRC6AQ5T6X5 926 aa23.83■■□□□ 1.41
ATPAF1-213ENST00000574428 LYPLAL1Q5VWZ2 237 aa23.83■■□□□ 1.41
ATPAF1-213ENST00000574428 SLC41A1Q8IVJ1 513 aa23.83■■□□□ 1.41
ATPAF1-213ENST00000574428 CAMKK1Q8N5S9 505 aa23.83■■□□□ 1.41
ATPAF1-213ENST00000574428 FAM76AQ8TAV0 307 aa23.83■■□□□ 1.41
ATPAF1-213ENST00000574428 ELMO2Q96JJ3 720 aa23.83■■□□□ 1.41
ATPAF1-213ENST00000574428 KLF6Q99612 283 aaPredicted RBP23.83■■□□□ 1.41
ATPAF1-213ENST00000574428 TTC1Q99614 292 aa23.83■■□□□ 1.41
ATPAF1-213ENST00000574428 SPATA6Q9NWH7 488 aaPredicted RBP23.83■■□□□ 1.41
ATPAF1-213ENST00000574428 K7ESF4 209 aa23.83■■□□□ 1.4
ATPAF1-213ENST00000574428 TPP1O14773 563 aa23.83■■□□□ 1.4
ATPAF1-213ENST00000574428 MT-ND3P03897 115 aa23.83■■□□□ 1.4
ATPAF1-213ENST00000574428 ALDOAP04075 364 aaKnown RBP23.83■■□□□ 1.4
ATPAF1-213ENST00000574428 PPARGP37231 505 aaPredicted RBP23.83■■□□□ 1.4
ATPAF1-213ENST00000574428 PTGER3P43115 390 aa23.83■■□□□ 1.4
ATPAF1-213ENST00000574428 PGGT1BP53609 377 aa23.83■■□□□ 1.4
ATPAF1-213ENST00000574428 LRRC14Q15048 493 aa23.83■■□□□ 1.4
ATPAF1-213ENST00000574428 KDM7AQ6ZMT4 941 aa23.83■■□□□ 1.4
ATPAF1-213ENST00000574428 EXOC3L1Q86VI1 746 aa23.83■■□□□ 1.4
ATPAF1-213ENST00000574428 GDAP1Q8TB36 358 aa23.83■■□□□ 1.4
ATPAF1-213ENST00000574428 COPS8Q99627 209 aa23.83■■□□□ 1.4
ATPAF1-213ENST00000574428 MBNL1Q9NR56 388 aaKnown RBP23.83■■□□□ 1.4
ATPAF1-213ENST00000574428 ZDHHC3Q9NYG2 299 aa23.83■■□□□ 1.4
ATPAF1-213ENST00000574428 MUC3AQ02505 3323 aa23.83■■□□□ 1.4
ATPAF1-213ENST00000574428 HMGB1P1B2RPK0 211 aaPredicted RBP23.82■■□□□ 1.4
ATPAF1-213ENST00000574428 GOLGA8RI6L899 631 aa23.82■■□□□ 1.4
ATPAF1-213ENST00000574428 ZNF217O75362 1048 aa23.82■■□□□ 1.4
ATPAF1-213ENST00000574428 MTX2O75431 263 aa23.82■■□□□ 1.4
ATPAF1-213ENST00000574428 RFPL1O75677 317 aa23.82■■□□□ 1.4
ATPAF1-213ENST00000574428 OXTRP30559 389 aa23.82■■□□□ 1.4
ATPAF1-213ENST00000574428 IRF4Q15306 451 aa23.82■■□□□ 1.4
ATPAF1-213ENST00000574428 MAP7D1Q3KQU3 841 aa23.82■■□□□ 1.4
ATPAF1-213ENST00000574428 CMC1Q7Z7K0 106 aa23.82■■□□□ 1.4
ATPAF1-213ENST00000574428 TRIM69Q86WT6 500 aa23.82■■□□□ 1.4
ATPAF1-213ENST00000574428 RBFAQ8N0V3 343 aa23.82■■□□□ 1.4
ATPAF1-213ENST00000574428 TP53I13Q8NBR0 393 aaPredicted RBP23.82■■□□□ 1.4
ATPAF1-213ENST00000574428 BTN2A2Q8WVV5 523 aa23.82■■□□□ 1.4
ATPAF1-213ENST00000574428 GLYATL1Q969I3 302 aa23.82■■□□□ 1.4
ATPAF1-213ENST00000574428 VPS35Q96QK1 796 aa23.82■■□□□ 1.4
ATPAF1-213ENST00000574428 FZD3Q9NPG1 666 aa23.82■■□□□ 1.4
ATPAF1-213ENST00000574428 KCTD5Q9NXV2 234 aa23.82■■□□□ 1.4
ATPAF1-213ENST00000574428 IGHV1OR15-9A0A0B4J2B8 117 aa23.81■■□□□ 1.4
ATPAF1-213ENST00000574428 RAD51BO15315 384 aa23.81■■□□□ 1.4
ATPAF1-213ENST00000574428 SLC31A1O15431 190 aa23.81■■□□□ 1.4
ATPAF1-213ENST00000574428 CREB1P16220 341 aa23.81■■□□□ 1.4
ATPAF1-213ENST00000574428 CD6P30203 668 aa23.81■■□□□ 1.4
ATPAF1-213ENST00000574428 AKT1P31749 480 aa23.81■■□□□ 1.4
ATPAF1-213ENST00000574428 USP10Q14694 798 aaKnown RBP23.81■■□□□ 1.4
ATPAF1-213ENST00000574428 KHDC1Q4VXA5 237 aaKnown RBP23.81■■□□□ 1.4
ATPAF1-213ENST00000574428 ZNF648Q5T619 568 aaPredicted RBP23.81■■□□□ 1.4
ATPAF1-213ENST00000574428 NLRP8Q86W28 1048 aa23.81■■□□□ 1.4
ATPAF1-213ENST00000574428 C4orf33Q8N1A6 199 aa23.81■■□□□ 1.4
ATPAF1-213ENST00000574428 CLDN19Q8N6F1 224 aa23.81■■□□□ 1.4
ATPAF1-213ENST00000574428 PKNOX2Q96KN3 472 aa23.81■■□□□ 1.4
ATPAF1-213ENST00000574428 BIRC8Q96P09 236 aa23.81■■□□□ 1.4
ATPAF1-213ENST00000574428 MYOCQ99972 504 aa23.81■■□□□ 1.4
ATPAF1-213ENST00000574428 P2RY12Q9H244 342 aa23.81■■□□□ 1.4
ATPAF1-213ENST00000574428 C6orf106Q9H6K1 298 aaPredicted RBP23.81■■□□□ 1.4
ATPAF1-213ENST00000574428 WSB2Q9NYS7 404 aaPredicted RBP23.81■■□□□ 1.4
ATPAF1-213ENST00000574428 CNOT6Q9ULM6 557 aaKnown RBP23.81■■□□□ 1.4
ATPAF1-213ENST00000574428 INVSQ9Y283 1065 aa23.81■■□□□ 1.4
ATPAF1-213ENST00000574428 ZNF7P17097 686 aaPredicted RBP23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms